mRNA_C-tenellus_contig10196.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Match: D7FVW7_ECTSI (ADH_zinc_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW7_ECTSI) HSP 1 Score: 299 bits (766), Expect = 3.930e-92 Identity = 156/211 (73.93%), Postives = 172/211 (81.52%), Query Frame = 1 Query: 1 GIKAEDAVYLPAVETALSLVHDTHPRVGERVAVFGQGMIGLLAVAILSKTHGSSAGGSVVAVDMLEERLAVATRLGATSAVSPQELPSLSPFDVSVEVTGNYRGLQAALDFTGYGGRVILGSWYGNTKAMLSLGMAFHRSHLTIQTSQVSSIPASLTDRWDKPRRFAAAWSLLKDLRPSNFLTTLRANLAGAQGAYEALEGGKELGVVLTY 633 GI EDAVYLPAVETALSLVHD HPRVGE VAVFGQGMIGLLAVAIL++TH GGSVVAVDML +RL VA RLGAT+ V+P + +PFDVS+EVTGN RGLQ+ALD TGYGGRV+LGSWYG A L+LGMAFHRSHLTIQTSQVS +PA LTDRWDK RRF AAWSL+++LRPS FLTT L GAQ AYE+L G ELGVV Y Sbjct: 798 GIDPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLAVAILARTHAGVGGGSVVAVDMLPDRLRVAERLGATATVTPVDAAKSAPFDVSLEVTGNPRGLQSALDLTGYGGRVVLGSWYGGGAAQLNLGMAFHRSHLTIQTSQVSRLPAGLTDRWDKDRRFLAAWSLVRELRPSVFLTTSSPPLDGAQEAYESLGAGSELGVVFRY 1008
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Match: A0A6H5LPZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPZ8_9PHAE) HSP 1 Score: 242 bits (617), Expect = 3.460e-73 Identity = 139/218 (63.76%), Postives = 152/218 (69.72%), Query Frame = 1 Query: 1 GIKAEDAVYLPAVETALSLVHDTHPRVGERVAVFGQGMIGLLAVAILSKTHGSSAGGSVVAVDMLEERLAVATRLGATSAVSPQELPSLSPFDVSVEVTGNYRGLQAALDFTGYGGRVILGSWYGNTKAMLSLGMAFHRSHLTIQTSQVS-------SIPASLTDRWDKPRRFAAAWSLLKDLRPSNFLTTLRANLAGAQGAYEALEGGKELGVVLTY 633 GI+ EDAVYLPAVETALSLVHD HPRVGE VAVFGQGMIGLLAVAIL+KTH GGSVVAVDML +RL VA R L +D V+ ALD TGYGGRV+LGSWYG A L+LGMAFHRSHLTIQTSQ S +PA LTDRWDK RRF AAWSL+++LRPS+FLTT L GAQ AYE+L G ELGVV Y Sbjct: 432 GIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLAVAILAKTHAGVGGGSVVAVDMLPDRLRVAERGSC-----------LLTWDKGKRVS--------ALDLTGYGGRVVLGSWYGGGAAQLNLGMAFHRSHLTIQTSQASVLPPDALKLPAGLTDRWDKDRRFLAAWSLVRELRPSDFLTTSAPPLDGAQEAYESLGAGSELGVVFRY 630
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Match: A0A835YW36_9STRA (ADH_zinc_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW36_9STRA) HSP 1 Score: 226 bits (577), Expect = 5.970e-71 Identity = 112/211 (53.08%), Postives = 150/211 (71.09%), Query Frame = 1 Query: 1 GIKAEDAVYLPAVETALSLVHDTHPRVGERVAVFGQGMIGLLAVAILSKTHGSSAGGSVVAVDMLEERLAVATRLGATSAVSPQELPSLSPFDVSVEVTGNYRGLQAALDFTGYGGRVILGSWYGNTKAMLSLGMAFHRSHLTIQTSQVSSIPASLTDRWDKPRRFAAAWSLLKDLRPSNFLTTLRANLAGAQGAYEALEGGKELGVVLTY 633 GI AEDA +LPAVETALSLV D +GE+VAVFGQG+IGLL AIL H GG V+AVD+L++R A RLGA+ A++P ++ PFD +EV+G+ R LQ+ALD TGYGG +I+GSWYG+T A L LG++FHRSHL ++ SQVS IPA+L+ RW K RRF AAW L++ +RP+ + T Q A++ALE G+ + +++ Y Sbjct: 83 GISAEDACFLPAVETALSLVQDARVVLGEKVAVFGQGLIGLLVTAILGMAHAGPGGGKVIAVDLLDDRRQAALRLGASEAITPDQVAQAGPFDTCIEVSGSSRALQSALDNTGYGGSIIIGSWYGSTPAPLKLGLSFHRSHLNLKASQVSHIPAALSARWTKERRFQAAWELVQQIRPAENVATRTIAPGEIQEAFQALETGQHVAIIIKY 293
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Match: B8BXG1_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXG1_THAPS) HSP 1 Score: 219 bits (559), Expect = 7.030e-67 Identity = 117/216 (54.17%), Postives = 147/216 (68.06%), Query Frame = 1 Query: 1 GIKAEDAVYLPAVETALSLVHDTHPRVGERVAVFGQGMIGLLAVAILSKTHGSSAGGS-----VVAVDMLEERLAVATRLGATSAVSPQELPSLSPFDVSVEVTGNYRGLQAALDFTGYGGRVILGSWYGNTKAMLSLGMAFHRSHLTIQTSQVSSIPASLTDRWDKPRRFAAAWSLLKDLRPSNFLTTLRANLAGAQGAYEALEGGKELGVVLTY 633 GI A DA+++P+VETALSLVHD H R+GE AV+GQG+IGLL +ILS S+ S V A D L +RL VA+ LGA SA+ PQ PFDVS+EV+GN R LQ+A+D T GR+I+GSWYGN+ L LG+ FHRSH TIQTSQVS+IP+SL W K RRFA W+L+K +RPS ++ L AQ AYE L+GGKE+ + Y Sbjct: 185 GIDARDAIFMPSVETALSLVHDAHVRIGENAAVYGQGLIGLLVTSILSMQSPSAVSSSNRFSSVTAFDTLGDRLCVASTLGADSALQPQSASDSGPFDVSIEVSGNPRALQSAIDHTANNGRIIVGSWYGNSDVSLKLGIDFHRSHKTIQTSQVSTIPSSLAGLWSKERRFAMTWALVKAIRPSRLISK-SLTLDDAQLAYELLDGGKEIAICFMY 399
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Match: A0A1E7FW20_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW20_9STRA) HSP 1 Score: 216 bits (549), Expect = 2.740e-65 Identity = 112/218 (51.38%), Postives = 152/218 (69.72%), Query Frame = 1 Query: 1 GIKAEDAVYLPAVETALSLVHDTHPRVGERVAVFGQGMIGLLAVAILSK-----THGSSAG--GSVVAVDMLEERLAVATRLGATSAVSPQELPSLSPFDVSVEVTGNYRGLQAALDFTGYGGRVILGSWYGNTKAMLSLGMAFHRSHLTIQTSQVSSIPASLTDRWDKPRRFAAAWSLLKDLRPSNFLTTLRANLAGAQGAYEALEGGKELGVVLTY 633 GI A+DA+++P++ETALS+VHD + RVGE VAV+GQG+IGLL A+LS+ H ++G S+ A DM+ +RLA A+++GA+ A+ P PFDVS+EV+GN R LQ+A+D T +GG++I+ SWYGN L LG+ FHRSH TIQTSQVS IPAS++ W K RRFA W L+K +RPS L+ + L AQ AYEAL+ G E+ + Y Sbjct: 193 GINAQDAIFMPSIETALSIVHDANVRVGENVAVYGQGLIGLLVTALLSRGKSTFDHDVTSGKFDSITAFDMIPDRLAAASKMGASQALVPGTESQGGPFDVSIEVSGNARALQSAIDNTSHGGKIIIASWYGNNDVSLKLGIEFHRSHKTIQTSQVSEIPASMSRLWSKERRFAFTWELVKQIRPSRLLSKIL-TLEHAQEAYEALDNGTEIAIAFDY 409
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Match: A0A7S4D6E6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6E6_HETAK) HSP 1 Score: 204 bits (519), Expect = 1.100e-63 Identity = 102/181 (56.35%), Postives = 137/181 (75.69%), Query Frame = 1 Query: 94 AVFGQGMIGLLAVAILSKTHGSSAGGSVVAVDMLEERLAVATRLGATSAVSPQELPSL-SPFDVSVEVTGNYRGLQAALDFTGYGGRVILGSWYGNTKAMLSLGMAFHRSHLTIQTSQVSSIPASLTDRWDKPRRFAAAWSLLKDLRPSNFLTTLRANLAGAQGAYEALEGGKELGVVLTY 633 AV GQG+IGLL A+L +HG++AGG V+AVD+++ERL AT +GAT +P E L D ++E++GN+RGLQ A+D TGYGG VI+GSWYG+ A LSLG+ FHRSHL +++SQVS++PA+LTDRW K RRFAAAW L+++LRPS +T+ A+++ AQ YE L G+ELGV TY Sbjct: 1 AVVGQGLIGLLVTAVLGASHGAAAGGKVIAVDIVQERLKTATEMGATHTATPDEFKVLYGEADTTIEMSGNFRGLQFAVDNTGYGGTVIIGSWYGSEPAQLSLGLNFHRSHLKLKSSQVSNVPAALTDRWTKARRFAAAWELVRELRPSRHITSRVAHVSEAQEMYERLLAGQELGVQFTY 181
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Match: A0A7S4I2J3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I2J3_9STRA) HSP 1 Score: 221 bits (563), Expect = 2.820e-63 Identity = 116/214 (54.21%), Postives = 152/214 (71.03%), Query Frame = 1 Query: 1 GIKAEDAVYLPAVETALSLVHDTHPRVGERVAVFGQGMIGLLAVAILS-KTHGSSAG--GSVVAVDMLEERLAVATRLGATSAVSPQELPSLSPFDVSVEVTGNYRGLQAALDFTGYGGRVILGSWYGNTKAMLSLGMAFHRSHLTIQTSQVSSIPASLTDRWDKPRRFAAAWSLLKDLRPSNFLTTLRANLAGAQGAYEALEGGKELGVVLTY 633 G+ AEDA+++P+VETALS+VHD H R+GERVAV+GQG+IGLL ++LS + GS+ G G+V A D RLA ++ +GA+ A+ P + PFDVS+EV+GN R LQ+A+D T GGR+I+GSWYGN L LG+ FHRSH TI+TSQVS IPA LT W+K RRFA W L++ +RPS +T + L AQ AYE L+ GKE+ V TY Sbjct: 813 GVAAEDAIFMPSVETALSIVHDAHVRIGERVAVYGQGLIGLLVTSLLSIQDIGSNTGLFGTVTAFDTFSGRLAASSVMGASQALLPTQASEAGPFDVSIEVSGNTRALQSAIDNTLSGGRIIVGSWYGNADVSLKLGIDFHRSHKTIKTSQVSKIPAELTALWNKDRRFALTWELVRKIRPSRLITRT-STLDEAQNAYELLDAGKEIAVAFTY 1025
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Match: B7G4N7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G4N7_PHATC) HSP 1 Score: 213 bits (543), Expect = 1.480e-60 Identity = 111/213 (52.11%), Postives = 148/213 (69.48%), Query Frame = 1 Query: 1 GIKAEDAVYLPAVETALSLVHDTHPRVGERVAVFGQGMIGLLAVAILSKTHGSSAGG--SVVAVDMLEERLAVATRLGATSAVSPQELPSLSPFDVSVEVTGNYRGLQAALDFTGYGGRVILGSWYGNTKAMLSLGMAFHRSHLTIQTSQVSSIPASLTDRWDKPRRFAAAWSLLKDLRPSNFLTTLRANLAGAQGAYEALEGGKELGVVLTY 633 GI A DA+++P+VETALS+VHD H R+GE VAVFGQG+IGLL A+ SK ++G ++ DML +RLA++ +GAT A+ P E+ + PFDV++EV+GN R LQAA+D GGR+++ SWYG+T L+LG+ FHRSH ++TSQVS IPA L W K RRFA AW L+++ RPS L T R L AQ AY+ALE G E+ + Y Sbjct: 791 GIGALDAIFMPSVETALSIVHDAHIRMGENVAVFGQGLIGLLVTALFSKQGFDTSGRLRALTVFDMLPDRLAMSALMGATQALLPSEVKTAGPFDVAIEVSGNGRALQAAIDNVKEGGRIVIASWYGSTAVDLNLGIEFHRSHKILKTSQVSKIPAELGSTWTKERRFALAWELVREYRPSR-LVTKRTKLEDAQEAYDALENGSEIAIAFDY 1002
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Match: A0A7S0W756_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W756_9CRYP) HSP 1 Score: 202 bits (515), Expect = 1.570e-59 Identity = 115/216 (53.24%), Postives = 145/216 (67.13%), Query Frame = 1 Query: 1 GIKAEDAVYLPAVETALSLVHDTHPRVGERVAVFGQGMIGLLAVAILSKTHGSSAGGSVVAVDMLEERLAVATRLGATSAVSPQELPSL--SP---FDVSVEVTGNYRGLQAALDFTGYGGRVILGSWYGNTKAMLSLGMAFHRSHLTIQTSQVSSIPASLTDRWDKPRRFAAAWSLLKDLRPSNFLTTLRANLAGAQGAYEALEGGKELGVVLTY 633 G+ EDA Y PAVETALSLV + P VGERVAV+GQG+IGLL AILS T GS +VVAV++ +R A+A R+GA + + P L + SP FDVS+EV+GN R LQ+A+D TG GRVI+GSWYG + L LG+ FHRSH+ ++ SQVS IPA L+ RWDK RRF AW ++ ++PS + T L GAQ AYE L G +G TY Sbjct: 261 GLSPEDACYFPAVETALSLVQEAAPIVGERVAVYGQGLIGLLVTAILSGTVGSQ---NVVAVELNAQRAAIARRMGAGTVLHPSALKAGRDSPDGDFDVSIEVSGNMRALQSAVDSTGESGRVIIGSWYGGKTSELKLGLDFHRSHIELRASQVSKIPAHLSGRWDKDRRFLEAWRWVQIIKPSATMGTSVVPLGGAQSAYENLLNGNTVGAEFTY 473
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Match: A0A448ZDQ0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZDQ0_9STRA) HSP 1 Score: 210 bits (535), Expect = 1.640e-59 Identity = 112/214 (52.34%), Postives = 148/214 (69.16%), Query Frame = 1 Query: 1 GIKAEDAVYLPAVETALSLVHDTHPRVGERVAVFGQGMIGLLAVAILSKTHGSSAGG---SVVAVDMLEERLAVATRLGATSAVSPQELPSLSPFDVSVEVTGNYRGLQAALDFTGYGGRVILGSWYGNTKAMLSLGMAFHRSHLTIQTSQVSSIPASLTDRWDKPRRFAAAWSLLKDLRPSNFLTTLRANLAGAQGAYEALEGGKELGVVLTY 633 GI +DA+++P+VETALSLVHD + R+GE VAV+GQG+IGLL A+LS+ GG S+ DM +RLA ++++GA+ A+ P FDVS+EV+GN+R LQ+A+D T GGRVI+GSWYG+ L LG+ FHRSH TIQTSQVS IPA+L+ W K RRFA W L+K +RPS LT + +L AQ AYEAL+ G E+ + Y Sbjct: 764 GIDPKDAIFMPSVETALSLVHDANVRIGENVAVYGQGLIGLLVTALLSQGRSDEPGGWFNSITTFDMFPDRLAASSKMGASQALVPGNKDH-EGFDVSIEVSGNFRALQSAIDQTLNGGRVIVGSWYGSKDVSLKLGIDFHRSHKTIQTSQVSEIPANLSRLWSKERRFAYTWDLVKQIRPSRLLTKI-ISLDEAQDAYEALDNGSEIAIAFDY 975 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10196.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10196.1.1 >prot_C-tenellus_contig10196.1.1 ID=prot_C-tenellus_contig10196.1.1|Name=mRNA_C-tenellus_contig10196.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=211bp GIKAEDAVYLPAVETALSLVHDTHPRVGERVAVFGQGMIGLLAVAILSKTback to top mRNA from alignment at C-tenellus_contig10196:131..3989+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10196.1.1 ID=mRNA_C-tenellus_contig10196.1.1|Name=mRNA_C-tenellus_contig10196.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3859bp|location=Sequence derived from alignment at C-tenellus_contig10196:131..3989+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10196:131..3989+ >mRNA_C-tenellus_contig10196.1.1 ID=mRNA_C-tenellus_contig10196.1.1|Name=mRNA_C-tenellus_contig10196.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=633bp|location=Sequence derived from alignment at C-tenellus_contig10196:131..3989+ (Choristocarpus tenellus KU2346)back to top |