mRNA_C-tenellus_contig10188.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10188.1.1
Unique NamemRNA_C-tenellus_contig10188.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Match: D8LKA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA8_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 1.670e-72
Identity = 208/591 (35.19%), Postives = 276/591 (46.70%), Query Frame = 3 
Query:  258 PSPGFVQKRRLAGAGSALDILASPTKKGTPT--RRMWADGGDEMPRTPADVSWARENAGNTPRALEKDFLRL-PARHARRNSEPVGNWIGVQALGKP-----------NSGSWSKEEDDQLRAGVSALG-------MHEWPAIARDFLGEARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCVALGMTSWTEIASRIPGRVGKQCRERWNNHLDPALIKGD-WTPEEETKLIEGHNRHGNKWSRIAKLLPGRSENAVKNRWNQLMYHGPSGSTRKPKKAIRPPRNYHGPVRGRTMSE----VVLSGPTPHPEHRRTPLGRPVNGRARGHSRRSSVSD--LTGLGGKGTSWVDDLMNQEEEFERSYRKPSSGLCEEGRGKEGGCGEEYTERERDLIDKAFRAGLDGGISSGLEATLQLEISPSSGSEVIGNMSGNFGASSVGGKDRRNGRAGGTWGQGEGGMGMPVQALESEEFDLFDPLALTDALADIEGDKVDDTSPGAEFRGGLGLQSCGPGSAKAGKILLAPPSPSGEVSPAXXXXLSPLGAGIPDVD-DIVDDKLVEGWGGIEEDPALRELYQSLDNIGESLFN 1943
            PSP   +KRRLAGA + L++LASP+K+GTP+  R  ++  G + PRTPADVSW RE AG TPRAL++DFL   PA                                 N  +W+KEE+DQL  G+++LG        +EW  IA  FL  +R+G QCA  WKMV+ PAL+KG W  EED  I DCVA G+T WTE+A+ +P R  K CRERW+NHLDP+L KG  WT  EE KL+     +G  WS IA+  PGRSE  ++  WN+L++                 RN  G  RGR+  E    V  SG                 GRA+  +     S+  L  LGG+      DL+ +E   E+  ++P+  L               T+RE+ L+D AF+ GL+G                      IG+++                                   L SEE DLF PL     L D EG                    CG G + +G   + PPSP+           SPL A     D   + D+L +GW  +++DPAL +LY+SLDNIGESLFN
Sbjct:    8 PSP-RTEKRRLAGAPAELEVLASPSKRGTPSKNRSFFSTSGSDNPRTPADVSWIREQAGTTPRALDRDFLAASPAAAVDVGXXXXXXXXXXXXXXXXXXXXXXKSKMFNRRTWTKEENDQLHEGIASLGGPNSNFGKNEWNKIAHHFLKGSRTGTQCATHWKMVVKPALLKGVWSAEEDAVIFDCVARGVTDWTEVAAALPKRKPKHCRERWSNHLDPSLRKGPGWTAAEEVKLVSAVEANGTNWSLIARHFPGRSEAVIQQHWNELVF-----------------RNSVGGRRGRSGMESGGGVACSG----------------RGRAKASTLPGEPSEIFLGDLGGQ------DLIARE--TEQQQQQPAVTL---------------TDREKALMDHAFKTGLNGC--------------------DIGSLT-----------------------------------LSSEEDDLFAPLTAA-LLRDEEG--------------------CG-GCSPSG---MPPPSPT----------CSPLKAHKQQPDYTSIGDQLGDGWV-VDDDPALADLYRSLDNIGESLFN 450
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BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Match: A0A7S2RZ51_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ51_9STRA)

HSP 1 Score: 208 bits (529), Expect = 5.990e-52
Identity = 91/145 (62.76%), Postives = 111/145 (76.55%), Query Frame = 3 
Query:  552 WSKEEDDQLRAGVSALGMHEWPAIARDFLGEARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCVALGMTSWTEIASRIPGRVGKQCRERWNNHLDPALIKGDWTPEEETKLIEGHNRHGNKWSRIAKLLPGRSENAVKNRWN 986
            W+KEED +LRA V+A+G   W  IA D+L + RS +QC +RW+ VL P LVKG W  EEDQ I DC+  G+T W+EIA RIPGR+GKQCRERW NHLDP+L KG WT EE+  L+E  ++ GN W++IAKLLPGRSENAVKNRWN
Sbjct:  257 WTKEEDQKLRAAVAAVGPQNWKLIASDYLNDQRSDVQCLHRWQKVLQPGLVKGPWTKEEDQIIIDCIEAGITKWSEIAERIPGRIGKQCRERWFNHLDPSLKKGGWTEEEDAVLVEAQSKWGNSWTKIAKLLPGRSENAVKNRWN 401
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BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Match: A0A2R5GS76_9STRA (Transcription factor MYB3R-2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GS76_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.170e-51
Identity = 88/157 (56.05%), Postives = 114/157 (72.61%), Query Frame = 3 
Query:  519 VQALGKPNSGSWSKEEDDQLRAGVSALGMHEWPAIARDFLGEARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCVALGMTSWTEIASRIPGRVGKQCRERWNNHLDPALIKGDWTPEEETKLIEGHNRHGNKWSRIAKL-LPGRSENAVKNRWN 986
            +   GK  SG W+K ED+ L+  V  +G   W  IA ++L + R+ +QC +RW+ VL P LVKG W PEED+TIR C+  G+T W+EIA+R+PGR+GKQCRERW NHLDP +   +WT EE+  LIEG ++ GNKWS+IAK+ LPGR ENAVKNRWN
Sbjct:  125 IAGSGKKGSGRWTKAEDESLKLAVKLVGARNWKRIASEYLADTRTDVQCLHRWQKVLRPGLVKGPWQPEEDETIRACIRSGITRWSEIATRVPGRIGKQCRERWFNHLDPNIRTDEWTEEEDQLLIEGQSKLGNKWSQIAKIYLPGRPENAVKNRWN 281
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BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Match: A0A7S3LND3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LND3_9STRA)

HSP 1 Score: 186 bits (471), Expect = 4.140e-49
Identity = 86/154 (55.84%), Postives = 106/154 (68.83%), Query Frame = 3 
Query:  537 PNSGS----WSKEEDDQLRAGVSALGMHEWPAIARDFLGEARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCVALGMTSWTEIASRIPGRVGKQCRERWNNHLDPALIKGDWTPEEETKLIEGHNRHGNKWSRIAKLLPGRSENAVKNRWN 986
            PN+GS    WSK+ED  LR  V  LG   W  I+    G  RS +QC +RW+ VL P LVKG W  EED T+R C+  G+  W+EIAS +PGR+GKQCRERW NHLDP ++KG WT EE+ KL +    +GN+WS IA L+PGR+ENAVKNRWN
Sbjct:    3 PNTGSSGKRWSKQEDGALRDAVDTLGPKNWKRISLVVPG--RSDVQCLHRWQKVLRPGLVKGPWTKEEDDTVRRCIETGIKKWSEIASYVPGRIGKQCRERWFNHLDPTILKGSWTKEEDEKLFKAQAEYGNRWSFIATLIPGRTENAVKNRWN 154
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BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Match: A0A5A8DBZ9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBZ9_CAFRO)

HSP 1 Score: 189 bits (481), Expect = 4.460e-49
Identity = 86/153 (56.21%), Postives = 104/153 (67.97%), Query Frame = 3 
Query:  537 PNSGSWSKEEDDQLRAGVSALGMHEWPAIARDFLGEARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCVALGMTSWTEIASRIPGRVGKQCRERWNNHLDPALIKGDWTPEEETKLIEGHNRHGNKWSRIAKLLPGRSENAVKNRWNQLM 995
            P  G WS EED  LR GV  LG   W  I+ ++L   R+ +QC +RW+ VL P LVKG W  EEDQ I +C+  G+T W+EI+ RIPGR+GKQCRERW NHLDP++ K  W+ EE+  L E     GNKW  IAKLLPGRSEN+VKNRWN  M
Sbjct:    6 PVGGKWSDEEDGSLRQGVQTLGAKNWKRISEEYLQGRRTDVQCLHRWQKVLRPGLVKGPWTTEEDQVIVNCINAGITKWSEISERIPGRIGKQCRERWFNHLDPSIKKDPWSAEEDRILEEAQCSIGNKWCEIAKLLPGRSENSVKNRWNSAM 158
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BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Match: A0A7S4DB75_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB75_HETAK)

HSP 1 Score: 184 bits (466), Expect = 1.140e-48
Identity = 83/168 (49.40%), Postives = 110/168 (65.48%), Query Frame = 3 
Query:  483 RRNSEPVGNWIGVQALGKPNSGSWSKEEDDQLRAGVSALGMHEWPAIARDFLGEARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCVALGMTSWTEIASRIPGRVGKQCRERWNNHLDPALIKGDWTPEEETKLIEGHNRHGNKWSRIAKLLPGRSENAVKNRWN 986
            +R  +PV        L +   G W K ED++LR GV ALG   W  +A+++L   R+ +QC +RW+ V+ P LVKG W  EED  I  C+  G+  W++IA RIPGR+GKQ RERW NHLDP L KG W+PEE+  L E   R GN W++IA+LLPGRS+N++KN WN
Sbjct:   64 QRKQKPV-----PAVLSQSYGGRWKKSEDEKLRKGVEALGPQAWRRVAQEYLDGKRTDMQCLHRWQKVVHPGLVKGAWTKEEDAVIVACMESGIKKWSKIAERIPGRIGKQVRERWFNHLDPHLKKGGWSPEEDAVLAEAQARWGNAWTKIARLLPGRSDNSIKNHWN 226
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BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Match: I0YVS2_COCSC (Homeodomain-like protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YVS2_COCSC)

HSP 1 Score: 177 bits (450), Expect = 5.590e-48
Identity = 80/151 (52.98%), Postives = 105/151 (69.54%), Query Frame = 3 
Query:  546 GSWSKEEDDQLRAGVSALGMHEWPAIARDFLGEARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCVA-LGMTSWTEIASRIPGRVGKQCRERWNNHLDPALIKGDWTPEEETKLIEGHNRHGNKWSRIAKLLPGRSENAVKNRWNQLM 995
            G W+ EED+ LR  VS  G   W  IA  F  E R+ +QC +RW+ VL+P LVKG W PEED  I + V  LG   W+ IA  +PGR+GKQCRERW+NHLDP + +GDWT EE++ L+E H  +GN+W++IA+ LPGR++NA+KN WN  M
Sbjct:   12 GGWTAEEDEVLRRAVSYYGAKNWKKIAEHF--EDRTDVQCLHRWQKVLNPELVKGPWTPEEDLKIIELVTRLGAKRWSLIAKDLPGRIGKQCRERWHNHLDPTIKRGDWTKEEDSMLVEKHAEYGNQWAKIAQFLPGRTDNAIKNHWNSTM 160
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BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Match: A0A7S2SVF3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF3_9STRA)

HSP 1 Score: 186 bits (473), Expect = 9.380e-48
Identity = 86/170 (50.59%), Postives = 109/170 (64.12%), Query Frame = 3 
Query:  480 ARRNSEPVGNWIGVQALGKP-NSGSWSKEEDDQLRAGVSALGMHEWPAIARDFLGEARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCVALGMTSWTEIASRIPGRVGKQCRERWNNHLDPALIKGDWTPEEETKLIEGHNRHGNKWSRIAKLLPGRSENAVKNRWN 986
            +    E + +  G  A GK    G W+K EDD+L+ GV+  G  +W  IA++ LG  R+  QC  RW+ VL+  LVKG W  EEDQ I DC+  G+  W+EIA  IPGRVGKQ RERW NHLDP + KG WT EE+  L     R GN W++IA+LLPGR+EN +KNRWN
Sbjct:   16 SEEEEEALASAAGQAAWGKGVKRGRWTKNEDDRLKQGVTLYGTTDWSRIAKEVLGGQRTEQQCVQRWRKVLERGLVKGTWTKEEDQIIIDCIEAGINRWSEIAEYIPGRVGKQARERWFNHLDPTIKKGSWTDEEDAILTVAQARWGNSWTKIARLLPGRAENTIKNRWN 185
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BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Match: F0Y9B4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9B4_AURAN)

HSP 1 Score: 176 bits (447), Expect = 9.860e-48
Identity = 81/148 (54.73%), Postives = 101/148 (68.24%), Query Frame = 3 
Query:  552 WSKEEDDQLRAGVSALGMHEWPAIARDFLGEARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCV---ALGMTSWTEIASRIPGRVGKQCRERWNNHLDPALIKGDWTPEEETKLIEGHNRHGNKWSRIAKLLPGRSENAVKNRWN 986
            W++EED++LR  V   G   W  +A   LG  RS +QC +RW  VL P L KG W  +ED+ ++D V     G   W+ IA+++PGR+GKQCRERW NHLDP + KGDWTPEE+  L E    HGN+WS IAKLLPGR+ENAVKNRWN
Sbjct:    2 WTEEEDNRLREIVETFGAKNWKRLAM-LLGNVRSDVQCLHRWNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWN 148
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BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Match: F0YEA4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEA4_AURAN)

HSP 1 Score: 176 bits (447), Expect = 1.750e-47
Identity = 81/147 (55.10%), Postives = 106/147 (72.11%), Query Frame = 3 
Query:  552 WSKEEDDQLRAGVSALGMHEWPAIARDFLG-EARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCVALG-MTSWTEIASRIPGRVGKQCRERWNNHLDPALIKGDWTPEEETKLIEGHNRHGNKWSRIAKLLPGRSENAVKNRWN 986
            W+K ED++LRAGV A+G  +W A+   +LG   RS  QC +RW+ VL   LVKG +  +ED+ I   +  G   +W +IA+RIPGR+GKQCRERW NHLDP+L KG WTPEE++ + E   R GN W++IA+LLPGR+ENAVKNRWN
Sbjct:   21 WTKREDEKLRAGVKAVGSGDWAAVCNTYLGGHGRSPEQCRHRWEHVLSEGLVKGAFTEDEDEIIVRAMKEGRQLTWMQIAARIPGRIGKQCRERWTNHLDPSLKKGGWTPEEDSIMAEAQTRWGNAWTKIAELLPGRAENAVKNRWN 167
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10188.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKA8_ECTSI1.670e-7235.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RZ51_9STRA5.990e-5262.76Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A2R5GS76_9STRA1.170e-5156.05Transcription factor MYB3R-2 n=1 Tax=Hondaea ferme... [more]
A0A7S3LND3_9STRA4.140e-4955.84Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A5A8DBZ9_CAFRO4.460e-4956.21Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S4DB75_HETAK1.140e-4849.40Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
I0YVS2_COCSC5.590e-4852.98Homeodomain-like protein (Fragment) n=1 Tax=Coccom... [more]
A0A7S2SVF3_9STRA9.380e-4850.59Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0Y9B4_AURAN9.860e-4854.73Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
F0YEA4_AURAN1.750e-4755.10Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10188contigC-tenellus_contig10188:65..3382 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LKA8
Preferred nameBAS1
PFAMsMyb_DNA-bind_6,Myb_DNA-binding
Model size2630
Max annot lvl2759|Eukaryota
KEGG koko:K09420,ko:K09422,ko:K09423,ko:K21769
KEGG Pathwayko04151,ko04218,ko05166,map04151,map04218,map05166
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0000278,GO:0000280,GO:0000976,GO:0000981,GO:0000988,GO:0000989,GO:0001046,GO:0001047,GO:0001067,GO:0001076,GO:0001134,GO:0001135,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0030154,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043565,GO:0044085,GO:0044212,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048285,GO:0048518,GO:0048522,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051225,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070925,GO:0071840,GO:0080090,GO:0090307,GO:0097159,GO:0140014,GO:0140110,GO:1901363,GO:1902680,GO:1902850,GO:1903047,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141
Exons4
Evalue9.58e-74
EggNOG OGsCOG5147@1|root,KOG0048@2759|Eukaryota
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-01_009570.1
DescriptionRNA polymerase II transcription regulator recruiting activity
Cds size2439
COG categoryADK
BRITEko00000,ko00001,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789119.520803-CDS-C-tenellus_contig10188:64..20861680789119.520803-CDS-C-tenellus_contig10188:64..2086Choristocarpus tenellus KU2346CDSC-tenellus_contig10188 65..2086 -
1680789119.5321577-CDS-C-tenellus_contig10188:2439..27121680789119.5321577-CDS-C-tenellus_contig10188:2439..2712Choristocarpus tenellus KU2346CDSC-tenellus_contig10188 2440..2712 -
1680789119.5418553-CDS-C-tenellus_contig10188:2903..29451680789119.5418553-CDS-C-tenellus_contig10188:2903..2945Choristocarpus tenellus KU2346CDSC-tenellus_contig10188 2904..2945 -
1680789119.5496554-CDS-C-tenellus_contig10188:3089..31911680789119.5496554-CDS-C-tenellus_contig10188:3089..3191Choristocarpus tenellus KU2346CDSC-tenellus_contig10188 3090..3191 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789119.5598195-UTR-C-tenellus_contig10188:3191..33821680789119.5598195-UTR-C-tenellus_contig10188:3191..3382Choristocarpus tenellus KU2346UTRC-tenellus_contig10188 3192..3382 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10188.1.1prot_C-tenellus_contig10188.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10188 65..3191 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10188.1.1

>prot_C-tenellus_contig10188.1.1 ID=prot_C-tenellus_contig10188.1.1|Name=mRNA_C-tenellus_contig10188.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=813bp
MFGGMPPPTKRGGLPPSSPRGAPSPGFVQKRRLAGAGSALDILASPTKKG
TPTRRMWADGGDEMPRTPADVSWARENAGNTPRALEKDFLRLPARHARRN
SEPVGNWIGVQALGKPNSGSWSKEEDDQLRAGVSALGMHEWPAIARDFLG
EARSGLQCANRWKMVLDPALVKGFWGPEEDQTIRDCVALGMTSWTEIASR
IPGRVGKQCRERWNNHLDPALIKGDWTPEEETKLIEGHNRHGNKWSRIAK
LLPGRSENAVKNRWNQLMYHGPSGSTRKPKKAIRPPRNYHGPVRGRTMSE
VVLSGPTPHPEHRRTPLGRPVNGRARGHSRRSSVSDLTGLGGKGTSWVDD
LMNQEEEFERSYRKPSSGLCEEGRGKEGGCGEEYTERERDLIDKAFRAGL
DGGISSGLEATLQLEISPSSGSEVIGNMSGNFGASSVGGKDRRNGRAGGT
WGQGEGGMGMPVQALESEEFDLFDPLALTDALADIEGDKVDDTSPGAEFR
GGLGLQSCGPGSAKAGKILLAPPSPSGEVSPAPPSPLSPLGAGIPDVDDI
VDDKLVEGWGGIEEDPALRELYQSLDNIGESLFNSQVEAGGDGSLGLGDF
NFDYAEKNSLLRTSLSLSPPRCLSMAHESVPGCSSPSQQINPEVSPGKTS
PVGNTGSSTMYTSGETQSQAGNEMEGKDVVQADSHPFLGDWTGLQPQNST
QPDLENKQPSIALQHSSSLMLDGDAQPTGRSSLWEEASGTTTALPGTVVS
SPRRPLSTIRGCLSESHASNTPAQVVGGGGVGSQGIVRRRPQRLFEALFE
GMWVVGRGKEGGG
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mRNA from alignment at C-tenellus_contig10188:65..3382-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10188.1.1 ID=mRNA_C-tenellus_contig10188.1.1|Name=mRNA_C-tenellus_contig10188.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3318bp|location=Sequence derived from alignment at C-tenellus_contig10188:65..3382- (Choristocarpus tenellus KU2346)
GTTTTTCAAGTCAGACATCCCCATCACCCAGGGTCGTTCATCAGGGTCAC
AGATGGATAACCTTGAGTTTTGTGACCTGAAAAGATCAACTTTAGACCAA
CAATGGTAAGGAAGTACTCGTGAGCTCTCGGAACTGTCTGTCACAACGAA
GTACTCGCTCAAAACGAAGTTTTCAAGACGTAGACAAGGTCATGTTTGGA
GGAATGCCTCCTCCAACAAAGCGAGGTGGCCTGCCACCTTCTTCGCCAAG
GGGGGCACCATCCCCTGGTTTTGTTCAGAAGCGGCGGCTTGCGGTGAGAT
AATACATAGTCTTTGCATTGTTGATGGGAATGGGAACCAAAATGCATATT
TTGCGCTGTGTTGCAGGGTATGCTCCACCTGTCAAACAAACCTGATATTC
GGAGCCGTGACCCCTGGCACATCTTCCACGTTTGCAGGGTGCCGGGAGTG
CATTGGATATATTGGCATCTCCTACAAAGGTGAATCGAGCGTGGGATTCA
TGTCCGCTTGGGATCTTCGTTCTTCCATCTCCGTCACACCTTAGCGCCTA
GATCCTGGTTGGTTGCTTTTGAAGCACGAACGGCCATTCTTCGCCACCAA
AGTTCCGAAACCCCAATGCTAATCAGCTGCACTGACCATCACTTTCCTCT
CTATCGCTATATTCTGGTAGAAAGGGACGCCGACACGTCGAATGTGGGCT
GATGGAGGGGACGAAATGCCACGAACTCCAGCCGACGTAAGCTGGGCTCG
GGAGAATGCTGGGAACACACCGCGTGCGCTTGAGAAGGACTTCTTGCGCT
TGCCAGCCCGCCATGCACGCAGGAACTCGGAACCTGTGGGCAACTGGATT
GGGGTTCAGGCACTGGGAAAGCCGAACAGTGGGAGCTGGTCTAAGGAGGA
GGATGATCAGCTTCGAGCAGGGGTCTCGGCGTTAGGCATGCACGTGAGTC
TCAACCTCGGAAGCTTCGATCTCCTATACTTATTTCTCAAAATTATTGCA
TTGAACATGACGTCCCCATACCCCATGCATCACTATGGCCGTATCCTCTG
GGTGCAACCGTGAGAGGACAATCGCGATTTTGCCTCAATCAAGTGTCCCT
CTTTGTAATATATTCTGCGCATCGGAACGAATGTATGAGTGTGTCCAGAA
GTTGCTGTACAGGTGTGAATATTTTCAAGGTTTTGGTTGATGTGGTCAAC
TGTGTGTTCAAGAGATACTTGCCCTAGGACAACAGAGTACCTTCCCCTTT
TTCATCTGTCTTGTCCTAAACTTGTGTATTGCTGGCAACAACACAGGAAT
GGCCTGCCATTGCACGGGATTTCCTTGGTGAAGCCCGCTCGGGTTTACAA
TGCGCAAACCGTTGGAAAATGGTGCTGGACCCTGCTCTCGTAAAGGGCTT
TTGGGGCCCTGAGGAGGACCAGACAATTCGAGACTGTGTAGCCCTTGGAA
TGACAAGCTGGACGGAGATTGCTTCTCGTATCCCTGGTAGGGTGGGGAAG
CAATGTCGGGAGCGTTGGAACAATCACCTTGACCCTGCCCTTATAAAGGG
GGACTGGACCCCAGAGGAAGAGACCAAGCTCATTGAGGGTCATAACCGTC
ATGGCAACAAGTGGTCTCGAATTGCCAAGCTCCTTCCAGGGCGATCTGAA
AATGCAGTAAAAAACCGATGGAATCAGCTGATGTATCATGGCCCTTCTGG
GTCCACTCGGAAGCCCAAAAAGGCCATCCGTCCTCCCCGAAATTATCATG
GTCCTGTGAGAGGAAGAACCATGTCTGAGGTGGTATTGAGTGGACCCACA
CCGCATCCTGAACATAGGAGAACACCTTTGGGAAGACCAGTCAATGGTAG
GGCCCGTGGACACTCCAGGAGGTCATCAGTCTCCGATCTGACAGGACTGG
GTGGGAAGGGAACAAGTTGGGTAGATGACCTAATGAATCAGGAGGAGGAG
TTTGAACGATCTTACAGAAAACCCTCTTCCGGATTGTGTGAGGAAGGGCG
GGGTAAGGAAGGCGGTTGTGGCGAGGAGTACACAGAGCGGGAGCGTGACC
TAATTGATAAGGCATTTAGGGCTGGTTTGGATGGAGGCATCTCTTCTGGT
CTTGAAGCAACCTTGCAGCTTGAAATCTCTCCTTCTTCAGGGAGCGAAGT
AATTGGAAACATGAGTGGCAATTTTGGTGCGTCAAGTGTTGGTGGAAAAG
ACAGGAGAAATGGGCGTGCTGGCGGGACCTGGGGCCAGGGGGAGGGGGGA
ATGGGGATGCCAGTCCAAGCACTGGAATCAGAGGAATTTGACCTGTTCGA
CCCTCTGGCTCTAACGGACGCTCTTGCTGACATCGAGGGAGATAAGGTGG
ATGATACATCTCCAGGAGCAGAGTTCAGGGGTGGGCTCGGACTACAGAGC
TGTGGTCCAGGTAGTGCAAAGGCCGGAAAGATTCTACTTGCTCCACCATC
TCCTTCTGGTGAAGTCTCCCCTGCCCCACCAAGCCCATTAAGCCCCCTTG
GGGCTGGGATACCTGATGTAGATGACATCGTCGATGACAAGCTGGTGGAG
GGCTGGGGGGGCATTGAAGAGGACCCAGCCCTGAGGGAGCTGTACCAGAG
CCTTGACAATATCGGCGAGTCCCTCTTCAACAGTCAGGTAGAGGCTGGAG
GTGATGGAAGCTTAGGCCTTGGAGACTTCAACTTTGACTATGCAGAAAAG
AACAGCTTGCTCCGGACCTCACTCTCCCTATCTCCTCCACGGTGCCTTTC
AATGGCCCATGAGTCCGTCCCTGGATGTTCTAGTCCATCACAACAGATCA
ATCCTGAGGTTTCTCCCGGGAAAACATCCCCTGTTGGTAATACTGGTTCC
TCTACTATGTACACAAGCGGTGAAACTCAGTCCCAAGCAGGCAATGAGAT
GGAGGGGAAGGATGTCGTGCAGGCTGATTCCCACCCCTTCTTGGGTGATT
GGACTGGGCTGCAACCCCAGAATTCAACACAACCTGACCTAGAGAATAAG
CAACCCAGCATTGCTCTCCAGCACTCTAGCTCTCTGATGCTCGATGGAGA
TGCACAACCCACAGGAAGATCCTCACTATGGGAGGAGGCTAGTGGAACAA
CAACTGCATTACCAGGGACTGTAGTTTCTTCTCCCCGCAGACCTCTCTCC
ACAATTCGTGGGTGTCTGTCTGAGTCACATGCGTCTAACACTCCGGCTCA
GGTGGTTGGTGGCGGAGGTGTCGGTAGTCAAGGTATTGTAAGGCGTCGAC
CACAACGCCTGTTTGAAGCACTCTTCGAAGGCATGTGGGTGGTGGGCAGA
GGAAAGGAAGGAGGTGGA
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Coding sequence (CDS) from alignment at C-tenellus_contig10188:65..3382-

>mRNA_C-tenellus_contig10188.1.1 ID=mRNA_C-tenellus_contig10188.1.1|Name=mRNA_C-tenellus_contig10188.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=2439bp|location=Sequence derived from alignment at C-tenellus_contig10188:65..3382- (Choristocarpus tenellus KU2346)
ATGTTTGGAGGAATGCCTCCTCCAACAAAGCGAGGTGGCCTGCCACCTTC
TTCGCCAAGGGGGGCACCATCCCCTGGTTTTGTTCAGAAGCGGCGGCTTG
CGGGTGCCGGGAGTGCATTGGATATATTGGCATCTCCTACAAAGAAAGGG
ACGCCGACACGTCGAATGTGGGCTGATGGAGGGGACGAAATGCCACGAAC
TCCAGCCGACGTAAGCTGGGCTCGGGAGAATGCTGGGAACACACCGCGTG
CGCTTGAGAAGGACTTCTTGCGCTTGCCAGCCCGCCATGCACGCAGGAAC
TCGGAACCTGTGGGCAACTGGATTGGGGTTCAGGCACTGGGAAAGCCGAA
CAGTGGGAGCTGGTCTAAGGAGGAGGATGATCAGCTTCGAGCAGGGGTCT
CGGCGTTAGGCATGCACGAATGGCCTGCCATTGCACGGGATTTCCTTGGT
GAAGCCCGCTCGGGTTTACAATGCGCAAACCGTTGGAAAATGGTGCTGGA
CCCTGCTCTCGTAAAGGGCTTTTGGGGCCCTGAGGAGGACCAGACAATTC
GAGACTGTGTAGCCCTTGGAATGACAAGCTGGACGGAGATTGCTTCTCGT
ATCCCTGGTAGGGTGGGGAAGCAATGTCGGGAGCGTTGGAACAATCACCT
TGACCCTGCCCTTATAAAGGGGGACTGGACCCCAGAGGAAGAGACCAAGC
TCATTGAGGGTCATAACCGTCATGGCAACAAGTGGTCTCGAATTGCCAAG
CTCCTTCCAGGGCGATCTGAAAATGCAGTAAAAAACCGATGGAATCAGCT
GATGTATCATGGCCCTTCTGGGTCCACTCGGAAGCCCAAAAAGGCCATCC
GTCCTCCCCGAAATTATCATGGTCCTGTGAGAGGAAGAACCATGTCTGAG
GTGGTATTGAGTGGACCCACACCGCATCCTGAACATAGGAGAACACCTTT
GGGAAGACCAGTCAATGGTAGGGCCCGTGGACACTCCAGGAGGTCATCAG
TCTCCGATCTGACAGGACTGGGTGGGAAGGGAACAAGTTGGGTAGATGAC
CTAATGAATCAGGAGGAGGAGTTTGAACGATCTTACAGAAAACCCTCTTC
CGGATTGTGTGAGGAAGGGCGGGGTAAGGAAGGCGGTTGTGGCGAGGAGT
ACACAGAGCGGGAGCGTGACCTAATTGATAAGGCATTTAGGGCTGGTTTG
GATGGAGGCATCTCTTCTGGTCTTGAAGCAACCTTGCAGCTTGAAATCTC
TCCTTCTTCAGGGAGCGAAGTAATTGGAAACATGAGTGGCAATTTTGGTG
CGTCAAGTGTTGGTGGAAAAGACAGGAGAAATGGGCGTGCTGGCGGGACC
TGGGGCCAGGGGGAGGGGGGAATGGGGATGCCAGTCCAAGCACTGGAATC
AGAGGAATTTGACCTGTTCGACCCTCTGGCTCTAACGGACGCTCTTGCTG
ACATCGAGGGAGATAAGGTGGATGATACATCTCCAGGAGCAGAGTTCAGG
GGTGGGCTCGGACTACAGAGCTGTGGTCCAGGTAGTGCAAAGGCCGGAAA
GATTCTACTTGCTCCACCATCTCCTTCTGGTGAAGTCTCCCCTGCCCCAC
CAAGCCCATTAAGCCCCCTTGGGGCTGGGATACCTGATGTAGATGACATC
GTCGATGACAAGCTGGTGGAGGGCTGGGGGGGCATTGAAGAGGACCCAGC
CCTGAGGGAGCTGTACCAGAGCCTTGACAATATCGGCGAGTCCCTCTTCA
ACAGTCAGGTAGAGGCTGGAGGTGATGGAAGCTTAGGCCTTGGAGACTTC
AACTTTGACTATGCAGAAAAGAACAGCTTGCTCCGGACCTCACTCTCCCT
ATCTCCTCCACGGTGCCTTTCAATGGCCCATGAGTCCGTCCCTGGATGTT
CTAGTCCATCACAACAGATCAATCCTGAGGTTTCTCCCGGGAAAACATCC
CCTGTTGGTAATACTGGTTCCTCTACTATGTACACAAGCGGTGAAACTCA
GTCCCAAGCAGGCAATGAGATGGAGGGGAAGGATGTCGTGCAGGCTGATT
CCCACCCCTTCTTGGGTGATTGGACTGGGCTGCAACCCCAGAATTCAACA
CAACCTGACCTAGAGAATAAGCAACCCAGCATTGCTCTCCAGCACTCTAG
CTCTCTGATGCTCGATGGAGATGCACAACCCACAGGAAGATCCTCACTAT
GGGAGGAGGCTAGTGGAACAACAACTGCATTACCAGGGACTGTAGTTTCT
TCTCCCCGCAGACCTCTCTCCACAATTCGTGGGTGTCTGTCTGAGTCACA
TGCGTCTAACACTCCGGCTCAGGTGGTTGGTGGCGGAGGTGTCGGTAGTC
AAGGTATTGTAAGGCGTCGACCACAACGCCTGTTTGAAGCACTCTTCGAA
GGCATGTGGGTGGTGGGCAGAGGAAAGGAAGGAGGTGGA
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