mRNA_C-tenellus_contig1016.3.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1016.3.1
Unique NamemRNA_C-tenellus_contig1016.3.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Match: D8LFI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFI9_ECTSI)

HSP 1 Score: 396 bits (1017), Expect = 6.850e-130
Identity = 224/406 (55.17%), Postives = 271/406 (66.75%), Query Frame = 3
Query:  129 MRIITGDETGLIKVVQVETGKCLAVSAGEQLRSRGARVLCWGH-----KDQRQDKPDFSHVHVGRNAGVVETWDVMSSTESDKVEDSCNL----TLVESLGCQADLVSLACLS-TQGGNRECYRLASCGTQGEVQVREV---GNDTMDVEPTTFSVRGPISAAFIHGDGKEGV-LVAGGKENDLATWDLQTKQCSWKAKNVPHDFLDLRQPVWVTAVQPVSPTEG----VTRLVAGTAHRQVRLYDTRAGRRPTHSVDADEHSIRSLVVNRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAGSVRSMALHPTLPVMACVGLDRTARVYDVQNGTELCNVYLKQRLNAVLFDAEEGLKTTSG-------KQGGAKRYSNEESD-SEDEGWGSGEEYEMDEGVSSE 1268
            MRIIT DETGL+KVV++E+G+CLAVSAGEQ R+   R +C+ H        R     F+ +HV R AG VETWDV S +E D     C L    T VE   C A  V+LACL      + E  R+ +C  +GEVQV      G    + E TT S+RGP+SAA   GDG  G+ L AGGKENDL TWDL T +C+WKAKNVPHDFLD+RQPVW+T++ P++   G    + ++VAGTAHRQVRLYD RA +RPTHSVDADEH + ++ V   G EV+ ADTAGLVR+LDLR+++WGRRF GPAGSVR +A HPTLPV+ACVGLDR ARVY   +  +   VYLKQRLNAVLFD EEG    +        K+ GAK  +    D S  EGWGSGEEYEMDE  SSE
Sbjct:    1 MRIITADETGLVKVVRLESGECLAVSAGEQARANAVRAVCFDHAAPAASRHRASDDFFARIHVARAAGAVETWDV-SQSERDGQTGGCALSARGTAVE---CAAAPVALACLPPASSSSSESSRVLTCNGEGEVQVSRAAPDGRSNDEAERTTLSIRGPVSAAVADGDGGSGLALAAGGKENDLKTWDLGTGKCTWKAKNVPHDFLDMRQPVWITSLCPLAAATGGGGGLQQMVAGTAHRQVRLYDARAQKRPTHSVDADEHGVTTMAVAPDGREVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPTLPVLACVGLDRMARVYGYHSREQKFQVYLKQRLNAVLFDGEEGEVQVAADGEDGEKKKSGAKDGAGAGEDWSGSEGWGSGEEYEMDEADSSE 402          
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Match: A0A835ZDI3_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI3_9STRA)

HSP 1 Score: 259 bits (663), Expect = 3.240e-78
Identity = 174/401 (43.39%), Postives = 221/401 (55.11%), Query Frame = 3
Query:  129 MRIITGDETGLIKVVQVETGKCLAVSA-GEQLRSRGARVLCWGHKDQRQDKPDFSHVHVGRNAGVVETWDVM-SSTESDKVEDSCNLTL-VESLGCQADLVSLACLSTQGGNRECY-RLASCGTQGEVQVREVGNDTMDVEPTTFSVRGPISAAFIHGDGKEGVLVAGGKENDLATWDLQTKQCSWKAKNVPHDF-LDLRQPVWVTAVQPVSPTE---GVTRLVAGTAHRQVRLYDTRAGRRPTHSVDADEHSIRSLVV----NRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAG-SVRSMALHPTLPVMACVGLDRTARVYDVQNG-----TELCNVYLKQRLNAVLFDAEEGLKTTSGKQGGAKRYSNEESDSEDEGWGSGEEYEMDEGVSSEEEG 1277
            MR++T DETGL+KV QVE+ K L     G Q R RG R LCWG        PD+S VHVGR  GVVE W V  ++ +  K+  S  +    +  GC A +VSL  L       +    + +C   GEV+V     D    E ++F    P+  A     G+ GVL  GG++ND+  WD+ T QC+W+AKNVP D  L L  PVW +A+ P+        +T L+AGTAHR +RLYDTRA RRP  ++D  EH I +L V      S +  I  D AG +  LDLR LR  RR+  P G +VR+ A+HPTLPV A VGLDR  RVYDV  G       L  +YLKQR + VLF  +EG  T  G    A   +    +  D+GWGS EEYEM  G  S EEG
Sbjct:    1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTS-PDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPC--DAAAGEGSSFKAPAPVHTAI----GRGGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLF-CDEGRATPDG----AIDRAAAALEGGDDGWGSAEEYEM--GAGSSEEG 387          
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Match: A0A196SLA0_BLAHN (WD repeat-containing protein n=2 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SLA0_BLAHN)

HSP 1 Score: 204 bits (518), Expect = 4.160e-57
Identity = 125/342 (36.55%), Postives = 184/342 (53.80%), Query Frame = 3
Query:  129 MRIITGDETGLIKVVQVETGKCLAVSAGEQLRSRGARVLCWGHKDQRQDKPDFSHVHVGRNAGVVETWDVMSSTESDKVEDSCNLTLVESLGCQADLVSLACLSTQGGNRECYRLASCGTQGEVQVREVGND-TMDVEPTTFSVRGPISAAFIHGDGKEGVLVAGGKENDLATWDLQTKQCSWKAKNVPHDFLDLRQPVWVTAVQPVSPTEGVTRLVAGTAHRQVRLYDTRAGRRPTHSVDADEHSIRSLVVNRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAGSVRSMALHPTLPVMACVGLDRTARVYDVQNGTELCNVYLKQRLNAVLFDAEEGLK 1151
            MRIITGD+TGLIK + +E  +      G Q R  G   + W  ++  ++    + + V    G V+ WDV      D+ E     T +E   C   ++          N+E   + SC T+G V + +   +  +D    +F V GP+S   +     + V   GG+END+A +D++ K   ++ +NVP+DFL+LR P+WV  +Q +S      +L   T H Q+RLYDTRA RRP  SV+  +       V R  + +   DT G V  +DLR LR    + G  GSVR +A+HPTLP +A VGLDR  RV+D ++  +L  VYL+Q+LNAVLF +EE +K
Sbjct:    1 MRIITGDDTGLIKQILIENKRIQRW--GTQSRENGVECMAWAGEEGNEE----NELGVVLRNGHVQVWDV------DQTEIVKEYTGIEGTACGMGILR---------NQEMRHIVSCTTEGSVYLFKWDEEEAID----SFDVNGPVSKMRLCPYNNK-VFAVGGRENDIALYDIEQKDAIFRGRNVPNDFLNLRVPIWVADMQFLSSDGSTHKLAVVTGHHQIRLYDTRAQRRPVQSVEIGDRPFTCCRVARDDSVLYTGDTTGRVSRIDLRTLRLSGTYKGNTGSVRDIAIHPTLPRLATVGLDRIMRVFDSESRQQLHRVYLRQQLNAVLFTSEEEVK 316          
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Match: A0A6G0XIB0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIB0_9STRA)

HSP 1 Score: 201 bits (510), Expect = 4.710e-56
Identity = 131/341 (38.42%), Postives = 170/341 (49.85%), Query Frame = 3
Query:  129 MRIITGDETGLIKVVQVETGKCLAVSAGEQLRSRGARVLCWGHKDQRQDKPDFSHVHVGRNAGVVETWDVMSSTESDKVEDSCNLTLVESLGCQADLVSLACLSTQGGNRECYRLASCGTQGEVQVREVGNDTMDVEPTTFSVRGPISAAFIHGDGKEGVLVAGGKENDLATWDLQTKQCSWKAKNVPHDFLDLRQPVWVTAVQPVSPTEGVTRLVAGTAHRQVRLYDTRAGRRPTHSVDADEHSIRSLVVNRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAGSVRSMALHPTLPVMACVGLDRTARVYDVQNGTELCNVYLKQRLNAVLFDAEEGLK 1151
            MR+I GDETGL+K + +E      +S   Q R+  AR L W   D          V V R  G V+  D+                   S   +   V L  +S  G       +  C T G V+V  V    +   P +F V   I    +   G   V+  GGKE D+  W+L+T+Q  +KAKN+PHD LD+R PVWV A+  +        L  GTA+ Q+R+YDT+  RRP       EH I SLVV+   N VI  DTAG V  LDLR  +   R+ GP GS+R +ALHP+LP MA VGLDR   V+ V     +   Y KQRLNAVLF  +EG+K
Sbjct:    1 MRVIVGDETGLVKNISLEASSAQLLSGSSQSRATSARYLAWTDND----------VVVARMNGHVDCVDIHGGASP------------WSFTREGSPVGLGVISEYGS------IVRCNTAGRVEV--VHPLHLKPNPPSFDVGHDIQTLRVDPFGSH-VIAIGGKERDVNLWNLETQQAIFKAKNIPHDNLDMRVPVWVKAMAFLPSANDGHHLAVGTAYHQIRIYDTKTKRRPVSEASFGEHPITSLVVHE--NRVIFGDTAGNVNALDLRTFKHLGRYHGPVGSIRDIALHPSLPYMAAVGLDRMVHVFHVDTRKAVHTYYAKQRLNAVLF-TDEGVK 307          
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Match: A0A024TXS7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXS7_9STRA)

HSP 1 Score: 197 bits (502), Expect = 6.240e-55
Identity = 133/347 (38.33%), Postives = 176/347 (50.72%), Query Frame = 3
Query:  129 MRIITGDETGLIKVVQVETGKCLAVSAGEQLRSRGARVLCWGHKDQRQDKPDFSHVHVGRNAGVVETWDVMSSTESDKVEDSCNLTLVESLGCQADLVSLACLSTQGGNRECYRLASCGTQGEVQVREVGNDTMDVEPTTFSVRGPISAAFIHGDGKEGVLVAGGKENDLATWDLQTKQCSWKAKNVPHDFLDLRQPVWVTAVQPVSPT------EGVTRLVAGTAHRQVRLYDTRAGRRPTHSVDADEHSIRSLVVNRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAGSVRSMALHPTLPVMACVGLDRTARVYDVQNGTELCNVYLKQRLNAVLFDAEEGLK 1151
            MR+I GDETGL+K V +E      ++   Q RS+ AR L W  KD          V V R  G V+   +   +      +   +     +G  A+  S+                 C T G V+V  V    +   P  F+V   I    ++      V+  GGKE D+  WDLQT+Q  +KAKNV HD LD+R PVWV A+  + PT      E   RLV GTA+ Q+R+YDT A RRP       EH I SLVV    + V+  DTAG V  +D+R  +   R+ GP GS+R MALHPTLP +A VGLDR   V+ ++    +   Y KQRLNAVLF  +EG+K
Sbjct:    1 MRVIVGDETGLVKNVALEAATATMLTGTAQGRSKSARYLAWSDKD----------VVVARTNGDVDCVGINGGSPWSFTREGSPV----GMGVVAEYGSIV---------------RCNTAGRVEV--VHPLHVKPNPPAFNVGNDIHTLRVNPYASN-VIAIGGKERDMNVWDLQTQQAVFKAKNVTHDNLDMRVPVWVKAITFLPPTSAAGGSESGHRLVVGTAYHQIRIYDTSAKRRPVLETSFGEHPITSLVVQ--DHRVMFGDTAGNVNAIDMRTFKHLGRYHGPVGSIRDMALHPTLPYVASVGLDRMVHVHHIEARKAVHTYYAKQRLNAVLF-TDEGVK 312          
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Match: A0A0W8DWJ8_PHYNI (WD repeat-containing protein 74 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DWJ8_PHYNI)

HSP 1 Score: 198 bits (503), Expect = 9.710e-55
Identity = 135/349 (38.68%), Postives = 194/349 (55.59%), Query Frame = 3
Query:  129 MRIITGDETGLIKVVQVETGKCLAVSAGEQ--LRSRGARVLCWGHKDQRQDKPDFS-HVHVGRNAGVVETWDVMSSTE-SDKVEDSCNLTLVESLGCQADLVSLACLSTQGGNRECYRLASCGTQGEVQVREVGNDTMDVEPTTFSVRGPISAAFIHGDGKEGVLVAGGKENDLATWDLQTKQCSWKAKNVPHDFLDLRQPVWVTAVQPVSPTEGVT---RLVAGTAHRQVRLYDTRAGRRPTHSVDA-DEHSIRSLVVNRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAGSVRSMALHPTLPVMACVGLDRTARVYDVQNGTELCNVYLKQRLNAVLFDAEEGLK 1151
            MR++ GDETGL+K +++E  +   +S+ EQ   RSRG + LCW + D+R D  D+  +V + R  GVVE+++       S   E   +    +    +   V L  +   G       +  C   G+V VR    D    +P TF+V G ++   +     + V+  GGKE+DL  W L+T+Q  ++AKNV HD LD+R PVWV  ++ +S T G +   R++ GT HR VR+YD+   RRP   +D   E+ I+SL V+     V   DTAG + +LDLR L+   R  GP GS+R +A HPTLP +A VGLDR   V+DV        +Y KQRLN+VLF A+ GLK
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRILSSREQPQARSRGIQRLCW-YADER-DAADYQRNVVLARADGVVESYEASHGKSLSAAKEPDWSWPASDKEQSKTRCVGLDVIRKFGS------VVQCTDTGDVVVRSTLEDAG--KPATFNVDGDLNMMRLE-PATQTVIGVGGKEHDLNLWSLETQQVLFRAKNVTHDKLDMRVPVWVKDLRFLS-TPGNSNGHRVIVGTGHRHVRIYDSNTKRRPVQQLDNFGENPIQSLCVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACHPTLPYIAAVGLDRMVHVFDVNTRKYRHTIYAKQRLNSVLFCAD-GLK 336          
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Match: A0A1W0A9N6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9N6_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.010e-54
Identity = 132/341 (38.71%), Postives = 179/341 (52.49%), Query Frame = 3
Query:  129 MRIITGDETGLIKVVQVETGKCLAVSAGEQLRSRGARVLCWGHKDQRQDKPDFSHVHVGRNAGVVETWDVMSSTESDKVEDSCNLTLVESLGCQADLVSLACLSTQGGNRECYRLASCGTQGEVQVREVGNDTMDVEPTTFSVRGPISAAFIHGDGKEGVLVAGGKENDLATWDLQTKQCSWKAKNVPHDFLDLRQPVWVTAVQPVSPTEGVTRLVAGTAHRQVRLYDTRAGRRPTHSVDADEHSIRSLVVNRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAGSVRSMALHPTLPVMACVGLDRTARVYDVQNGTELCNVYLKQRLNAVLFDAEEGLK 1151
            MR+I GDETGL+K V +E    + +    Q RS  A+ L W      +DK     V V R  G V+      S  +D  E   + T       +   V +  L   G       +  C   G V+V    N  +  +P +FSV   I    +       V+  GG E D   WDL+T+Q  +KAKNV HD LD+R PVWV A+  + P+EG  RLV GTA+ Q+R+YDT+  RRP   V   +  I S+ V+   N VI  DTAG +  LDLR L+   R+AG  GS+R +A+HPT+P MA VGLDR   VY++++       Y KQRLN+VLF  +EG+K
Sbjct:    1 MRVIIGDETGLVKNVALEADTFVHLGGSTQSRSTSAKYLAW-----TEDKD----VVVARANGKVD------SLATDGTETPWSFTS------EGIPVGMGVLPDFGS------IVRCNVNGNVEVVHPLN--IKPKPQSFSVGHDIQVLRVD-PLNSNVIAIGGNERDANLWDLETQQAIFKAKNVTHDNLDMRVPVWVKAISFLPPSEG-QRLVVGTAYHQIRIYDTKTKRRPVQEVSFGDLPITSMAVHE--NRVIFGDTAGNINALDLRTLKHLGRYAGSVGSIRDIAIHPTMPYMAAVGLDRMVHVYNIESRKSYATHYAKQRLNSVLF-TDEGIK 307          
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Match: K3WS22_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS22_GLOUD)

HSP 1 Score: 196 bits (499), Expect = 4.000e-54
Identity = 125/345 (36.23%), Postives = 186/345 (53.91%), Query Frame = 3
Query:  129 MRIITGDETGLIKVVQVETGKCLAVSAGE--QLRSRGARVLCWGHKDQRQDKPDFSHVHVGRNAGVVETWDVMSSTESDKVEDSCNLTLVESLGCQADLVSLACLSTQGGNRECYRLASCGTQGEVQVREVGNDTMDVEPTTFSVRGPISAAFIHGDGKEGVLVA-GGKENDLATWDLQTKQCSWKAKNVPHDFLDLRQPVWVTAVQPVSP-TEGVTRLVAGTAHRQVRLYDTRAGRRPTHSVDADEHSIRSLVVNRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAGSVRSMALHPTLPVMACVGLDRTARVYDVQNGTELCNVYLKQRLNAVLFDAEEGLK 1151
            MR++ GDETGL+K +++E  +   VS+ +  Q R  G + +CW ++D+ QD     +V V R  G+VE +       +       N       G    +         G  ++   +  C   G+V V+ + +++   +P+TFSV   I    I  + KE   +A GG E DL  W L+ ++C +KAKNV HD LD+R PVWV  ++ +S  +    R+V GT ++ VR+YDT   RRP   +   E+ I +L V+     V  ADTAG + +LDLR L+   R  GP G++R +A HPTLP +A VGLDR   V+DV       NVY KQRLN V+F  ++G+K
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQHVVSSRKEPQARVHGIQSMCW-YEDETQDTSSKENVVVARGNGIVENYSSAHGKSAATSSREANWQFTAPTGKTTGI---------GMIQKFGSVVRCTDAGDVFVKNMLSES--AKPSTFSVGANIHRMRI--EPKEQTHIAVGGNERDLNIWSLEKQECVFKAKNVTHDNLDMRVPVWVKDLRFLSQGSSNGHRVVVGTGYQHVRIYDTNTKRRPVQELKFGEYPINALCVSPDETRVYIADTAGNLDILDLRTLKHMGRCTGPVGAIRDIACHPTLPYIAAVGLDRFVHVFDVNTRKYQHNVYAKQRLNTVMF-CDDGVK 330          
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Match: A0A3R7JCA4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JCA4_9STRA)

HSP 1 Score: 196 bits (498), Expect = 9.160e-54
Identity = 124/342 (36.26%), Postives = 188/342 (54.97%), Query Frame = 3
Query:  129 MRIITGDETGLIKVVQVETG--KCLAVSAGEQLRSRGARVLCWGHKDQRQDKPDFSHVHVGRNAGVVETWDVM-SSTESDKVEDSCNLTLVESLGCQADLVSLACLSTQGGNRECYRLASCGTQGEVQVREVGNDTMDVEPTTFSVRGPISAAFIHGDGKEGVLVAGGKENDLATWDLQTKQCSWKAKNVPHDFLDLRQPVWVTAVQPVSP-TEGVTRLVAGTAHRQVRLYDTRAGRRPTHSVDA-DEHSIRSLVVNRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAGSVRSMALHPTLPVMACVGLDRTARVYDVQNGTELCNVYLKQRLNAVLFDAE 1139
            MR++ GDETGL+K +++E    + L+  A  Q R+R  + LCW + D+R+      +V + R  G+VE+++ +   T S   E     T  E +  +   V L  L   G       +  C + G+V VR         +P +F+V   +    +    ++ V+  GGKE+DL  W L+T+Q  +KAKNV H+ LD+R PVWV  ++ +S  +    R+V GT HR +R+YD+   RRP   +D+  E+ ++S+ V+     V   DTAG + +LDLR L+   R  GP GS+R +A HPTLP +A VGLDR   V+DV        +Y KQRLN+VLF A+
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRILSSRAHPQARARAIQRLCW-YGDEREAADFQRNVVLARADGIVESYEALHGKTLSSSREPDWLWTAGEEVAPKTRCVGLGVLHKFGS------VVQCSSSGDVLVRSTLEGAG--KPASFNVGADLEKMQLEPT-QQTVIGLGGKEHDLNLWSLETQQMLFKAKNVTHNNLDMRVPVWVKDLRFLSSGSSNGHRVVVGTGHRHIRIYDSNTKRRPVQQLDSFGENPVQSICVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACHPTLPYIAAVGLDRMVHVFDVNTRNYRHTIYAKQRLNSVLFCAD 332          
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Match: A0A1V9YET1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YET1_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.120e-53
Identity = 131/337 (38.87%), Postives = 171/337 (50.74%), Query Frame = 3
Query:  129 MRIITGDETGLIKVVQVETGKCLAVSAGEQLRSRGARVLCWGHKDQRQDKPDFSHVHVGRNAGVVETWDVMSSTESDKVEDSCNLTLVESLGCQADLVSLACLSTQGGNRECYRLASCGTQGEVQVREVGNDTMDVEPTTFSVRGPISAAFIHGDGKEGVLVAGGKENDLATWDLQTKQCSWKAKNVPHDFLDLRQPVWVTAVQPVSPTEGVTRLVAGTAHRQVRLYDTRAGRRPTHSVDADEHSIRSLVVNRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAGSVRSMALHPTLPVMACVGLDRTARVYDVQNGTELCNVYLKQRLNAVLFDAE 1139
            MR+I GDETGL+K V +E G    + A  Q R+ GA+ L W       DK     V + R  G V   D +++  +D            +   Q   V +  L   G       +  C  +G V+V    N  +   P  FSV   I    +       ++  GGKE DL  WDL+T+  ++KAKNV HD LD+R PVWV A++ + P+ G  RLV GT H QVR+YDT   RRP       E  I ++ V    N VI +DTAG +  LDLR  +   R+ GP GS+R +ALHPTLP MA VGLDR   VY  +    +   Y KQRLNAVLF  E
Sbjct:    1 MRVIIGDETGLVKSVGLEAGTAQVLGAPGQSRATGAKYLAW-----TADKD----VVIARANGRV---DCVAADGADAPW---------TFSSQGAPVGMGVLPEFGS------IVRCNVEGRVEVVHPLN--IKPNPAAFSVGQDIHTLRVD-PLSSNIIAIGGKERDLNLWDLETQTATFKAKNVTHDNLDMRVPVWVKAIEFLPPSGG-HRLVVGTGHHQVRIYDTNTKRRPVQETSFGELPITAIAVK--DNRVIFSDTAGNINALDLRNFKHLGRYHGPVGSIRDIALHPTLPYMAAVGLDRMVHVYHTETRKNVHTYYAKQRLNAVLFTDE 304          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1016.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFI9_ECTSI6.850e-13055.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDI3_9STRA3.240e-7843.39Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A196SLA0_BLAHN4.160e-5736.55WD repeat-containing protein n=2 Tax=Blastocystis ... [more]
A0A6G0XIB0_9STRA4.710e-5638.42Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024TXS7_9STRA6.240e-5538.33Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A0W8DWJ8_PHYNI9.710e-5538.68WD repeat-containing protein 74 n=10 Tax=Phytophth... [more]
A0A1W0A9N6_9STRA1.010e-5438.71Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
K3WS22_GLOUD4.000e-5436.23Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7JCA4_9STRA9.160e-5436.26Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A1V9YET1_9STRA1.120e-5338.87Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1016contigC-tenellus_contig1016:7702..9248 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LFI9
Preferred nameWDR74
PFAMsWD40
Model size1547
Max annot lvl2759|Eukaryota
KEGG koko:K14841
Hectar predicted targeting categoryother localisation
GOsGO:0001701,GO:0001824,GO:0001825,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009653,GO:0009790,GO:0009792,GO:0009987,GO:0016070,GO:0019725,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0042254,GO:0042273,GO:0042592,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0046716,GO:0048646,GO:0048856,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
Exons1
Evalue1.84e-131
EggNOG OGsKOG3881@1|root,KOG3881@2759|Eukaryota
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-04_002020.1
Descriptionribosomal large subunit biogenesis
Cds size1386
COG categoryD
BRITEko00000,ko03009
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789118.3259897-UTR-C-tenellus_contig1016:7701..78291680789118.3259897-UTR-C-tenellus_contig1016:7701..7829Choristocarpus tenellus KU2346UTRC-tenellus_contig1016 7702..7829 +
1680789118.3540194-UTR-C-tenellus_contig1016:9215..92481680789118.3540194-UTR-C-tenellus_contig1016:9215..9248Choristocarpus tenellus KU2346UTRC-tenellus_contig1016 9216..9248 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789118.3412457-CDS-C-tenellus_contig1016:7829..92151680789118.3412457-CDS-C-tenellus_contig1016:7829..9215Choristocarpus tenellus KU2346CDSC-tenellus_contig1016 7830..9215 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1016.3.1prot_C-tenellus_contig1016.3.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1016 7830..9215 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1016.3.1

>prot_C-tenellus_contig1016.3.1 ID=prot_C-tenellus_contig1016.3.1|Name=mRNA_C-tenellus_contig1016.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=462bp
MRIITGDETGLIKVVQVETGKCLAVSAGEQLRSRGARVLCWGHKDQRQDK
PDFSHVHVGRNAGVVETWDVMSSTESDKVEDSCNLTLVESLGCQADLVSL
ACLSTQGGNRECYRLASCGTQGEVQVREVGNDTMDVEPTTFSVRGPISAA
FIHGDGKEGVLVAGGKENDLATWDLQTKQCSWKAKNVPHDFLDLRQPVWV
TAVQPVSPTEGVTRLVAGTAHRQVRLYDTRAGRRPTHSVDADEHSIRSLV
VNRSGNEVIAADTAGLVRLLDLRQLRWGRRFAGPAGSVRSMALHPTLPVM
ACVGLDRTARVYDVQNGTELCNVYLKQRLNAVLFDAEEGLKTTSGKQGGA
KRYSNEESDSEDEGWGSGEEYEMDEGVSSEEEGEEHKERTRECVFKGRGQ
GSDESSSDEIGSDEDMGGSDDEDEGCHISQKESESEEQGTAPPKRRKSAQ
SLPSKSKRKLV*
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mRNA from alignment at C-tenellus_contig1016:7702..9248+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1016.3.1 ID=mRNA_C-tenellus_contig1016.3.1|Name=mRNA_C-tenellus_contig1016.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1547bp|location=Sequence derived from alignment at C-tenellus_contig1016:7702..9248+ (Choristocarpus tenellus KU2346)
GGGTGGGGGAATAAAACCACGTAACACCGCGTTACGTTTATCAACGTTTG ATATTTGATATGAACCCCATAAAGGAGTACTGAGTACTACTCTTAACAGA TCATTAGTGGGAAGAGGGCAGTCATCCGATGAGGATCATCACAGGAGATG AGACCGGCCTCATCAAGGTGGTGCAGGTTGAGACTGGAAAATGCCTTGCT GTAAGTGCTGGAGAACAGCTCAGGTCACGGGGAGCTCGTGTCTTATGTTG GGGCCACAAGGACCAACGACAGGATAAACCTGACTTCAGCCATGTTCACG TTGGGCGCAACGCTGGAGTGGTGGAAACATGGGACGTAATGTCATCGACA GAAAGTGATAAGGTTGAAGATAGCTGTAATCTGACCCTCGTAGAATCTCT GGGGTGCCAAGCTGATCTCGTCTCGCTTGCTTGCCTGTCCACCCAAGGAG GCAACAGAGAATGCTACCGCCTCGCAAGTTGTGGTACACAAGGGGAGGTA CAAGTGCGTGAGGTGGGGAATGATACGATGGATGTTGAACCCACTACATT CTCCGTCCGTGGGCCGATCAGTGCTGCCTTCATACACGGAGATGGCAAGG AGGGAGTGCTGGTGGCTGGAGGGAAAGAGAACGATCTAGCAACATGGGAC CTGCAGACCAAGCAGTGTTCATGGAAAGCTAAGAACGTCCCTCATGACTT CCTGGACCTTCGGCAACCAGTATGGGTGACTGCTGTCCAGCCTGTGTCCC CGACCGAAGGCGTAACACGGCTAGTGGCTGGAACCGCTCACCGTCAAGTT CGTTTATATGACACGCGGGCTGGCAGGCGCCCCACGCATAGTGTTGACGC AGACGAACACAGCATAAGGAGTTTGGTCGTGAATCGGTCTGGCAACGAAG TGATTGCTGCTGACACGGCTGGGCTTGTAAGGTTGCTGGACCTGAGGCAA CTCAGGTGGGGTCGTCGCTTCGCAGGCCCTGCTGGGTCCGTGAGGAGTAT GGCTCTTCACCCAACCTTGCCTGTGATGGCGTGTGTTGGCCTCGACCGCA CAGCAAGAGTATACGATGTCCAGAATGGGACTGAGCTCTGCAATGTGTAC CTCAAGCAGCGGCTCAATGCTGTACTTTTCGATGCAGAGGAGGGGCTAAA AACTACTAGTGGCAAACAGGGAGGAGCTAAGCGGTATAGTAATGAAGAGT CAGACAGTGAGGATGAAGGTTGGGGGTCTGGCGAGGAGTATGAAATGGAC GAAGGGGTTAGTTCCGAGGAAGAAGGAGAGGAACACAAAGAGAGGACCAG GGAATGCGTTTTTAAGGGTCGTGGGCAAGGTAGTGATGAGTCAAGTAGTG ATGAGATTGGTAGTGATGAGGACATGGGGGGGAGTGATGATGAGGATGAG GGATGCCACATTTCACAAAAAGAGAGCGAAAGTGAGGAACAGGGGACAGC TCCACCAAAACGCCGAAAATCGGCGCAATCTTTGCCATCCAAATCAAAGA GAAAGCTGGTGTAAGTTGATAAACAGTAACCCAGAGTTAAATAATCC
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Coding sequence (CDS) from alignment at C-tenellus_contig1016:7702..9248+

>mRNA_C-tenellus_contig1016.3.1 ID=mRNA_C-tenellus_contig1016.3.1|Name=mRNA_C-tenellus_contig1016.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1386bp|location=Sequence derived from alignment at C-tenellus_contig1016:7702..9248+ (Choristocarpus tenellus KU2346)
ATGAGGATCATCACAGGAGATGAGACCGGCCTCATCAAGGTGGTGCAGGT
TGAGACTGGAAAATGCCTTGCTGTAAGTGCTGGAGAACAGCTCAGGTCAC
GGGGAGCTCGTGTCTTATGTTGGGGCCACAAGGACCAACGACAGGATAAA
CCTGACTTCAGCCATGTTCACGTTGGGCGCAACGCTGGAGTGGTGGAAAC
ATGGGACGTAATGTCATCGACAGAAAGTGATAAGGTTGAAGATAGCTGTA
ATCTGACCCTCGTAGAATCTCTGGGGTGCCAAGCTGATCTCGTCTCGCTT
GCTTGCCTGTCCACCCAAGGAGGCAACAGAGAATGCTACCGCCTCGCAAG
TTGTGGTACACAAGGGGAGGTACAAGTGCGTGAGGTGGGGAATGATACGA
TGGATGTTGAACCCACTACATTCTCCGTCCGTGGGCCGATCAGTGCTGCC
TTCATACACGGAGATGGCAAGGAGGGAGTGCTGGTGGCTGGAGGGAAAGA
GAACGATCTAGCAACATGGGACCTGCAGACCAAGCAGTGTTCATGGAAAG
CTAAGAACGTCCCTCATGACTTCCTGGACCTTCGGCAACCAGTATGGGTG
ACTGCTGTCCAGCCTGTGTCCCCGACCGAAGGCGTAACACGGCTAGTGGC
TGGAACCGCTCACCGTCAAGTTCGTTTATATGACACGCGGGCTGGCAGGC
GCCCCACGCATAGTGTTGACGCAGACGAACACAGCATAAGGAGTTTGGTC
GTGAATCGGTCTGGCAACGAAGTGATTGCTGCTGACACGGCTGGGCTTGT
AAGGTTGCTGGACCTGAGGCAACTCAGGTGGGGTCGTCGCTTCGCAGGCC
CTGCTGGGTCCGTGAGGAGTATGGCTCTTCACCCAACCTTGCCTGTGATG
GCGTGTGTTGGCCTCGACCGCACAGCAAGAGTATACGATGTCCAGAATGG
GACTGAGCTCTGCAATGTGTACCTCAAGCAGCGGCTCAATGCTGTACTTT
TCGATGCAGAGGAGGGGCTAAAAACTACTAGTGGCAAACAGGGAGGAGCT
AAGCGGTATAGTAATGAAGAGTCAGACAGTGAGGATGAAGGTTGGGGGTC
TGGCGAGGAGTATGAAATGGACGAAGGGGTTAGTTCCGAGGAAGAAGGAG
AGGAACACAAAGAGAGGACCAGGGAATGCGTTTTTAAGGGTCGTGGGCAA
GGTAGTGATGAGTCAAGTAGTGATGAGATTGGTAGTGATGAGGACATGGG
GGGGAGTGATGATGAGGATGAGGGATGCCACATTTCACAAAAAGAGAGCG
AAAGTGAGGAACAGGGGACAGCTCCACCAAAACGCCGAAAATCGGCGCAA
TCTTTGCCATCCAAATCAAAGAGAAAGCTGGTGTAA
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