mRNA_C-tenellus_contig1015.1.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1015.1.2
Unique NamemRNA_C-tenellus_contig1015.1.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Match: D8LH21_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH21_ECTSI)

HSP 1 Score: 762 bits (1968), Expect = 1.920e-267
Identity = 454/589 (77.08%), Postives = 482/589 (81.83%), Query Frame = 3 
Query:  564 GNKYVPPHLRGGGSDASGGE---------GSGLGPAPIDGGSAPVGAWGPRPGGXXXXXHGDRGYDRGGGYXXXXXXXXXXXXXXXXYSXXXXX------------------------------------RGWDNSRDTRPPPRNSRWNDXXXXXXXXXXXXGRINSKGFHGDEKEDLRLEKELF-TKEHTSQGINFDRYDDIPVETSGDNVPEPIESFDSEMLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQFP-DGRRKSFPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGLVLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTPILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEV 2189
            G+KYVPPHLRGGG +   G          G   GP P+ G   P GAW PRPG          GY  G   XX XXXXXXXXXXXXX  XXXXX                                    R WD   D RP PRNSRWND XXXXXXXXXXX  IN+KGFHG+  EDLRLEK+LF T EH SQGINFDRYDDIPVETSG+NVPEPI+SF+ +MLG +LMRTT LC Y KPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQ+P DGRRKS+PVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGA+VRSQ R+LERGCDLLVATPGRL DL+ERGRISL CIQFLVLDEADRMLDMGFEPQIR IVE+ DMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDV Q+VEYV+Q++K PML+RTL+N+EA GLVLVFTETKRNADYLEYQL++QGYPASSIHGDKTQREREDALRLFKTG TPILVATDVAARGLDINNVTQVIN+DLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYE+
Sbjct:    4 GSKYVPPHLRGGGGEEGPGPAVVQPAGIPGGPGGPVPVQGAPQPTGAWAPRPGAG--------GYQGGXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKWDRG-DFRPAPRNSRWNDGXXXXXXXXXXX--INAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLACIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEM 581
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BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Match: A0A6H5JCH1_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH1_9PHAE)

HSP 1 Score: 751 bits (1939), Expect = 5.240e-262
Identity = 402/452 (88.94%), Postives = 429/452 (94.91%), Query Frame = 3 
Query:  840 DTRPPPRNSRWNDXXXXXXXXXXXXGRINSKGFHGDEKEDLRLEKELF-TKEHTSQGINFDRYDDIPVETSGDNVPEPIESFDSEMLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQFP-DGRRKSFPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGLVLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTPILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEV 2189
            D+RP PRNSRWNDXXXXXXXXXXXX  +N+KGFHG+  EDLRLEK+LF T EH SQGINFDRYDDIPVETSG+NVPEPI+SF+ +MLG +LMRTT LC Y KPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQ+P DGRRKS+PVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGA+VRSQ R+LERGCDLLVATPGRL DL+ERGRISL CIQFLVLDEADRMLDMGFEPQIR IVE+ DMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDV Q+VEYV+Q++K PML+RTL+N+EA GLVLVFTETKRNADYLEYQL++QGYPASSIHGDKTQREREDALRLFKTG TPILVATDVAARGLDINNVTQVIN+DLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYE+
Sbjct:  215 DSRPAPRNSRWNDXXXXXXXXXXXX--VNAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLACIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEM 664
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BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Match: A0A835ZB12_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB12_9STRA)

HSP 1 Score: 646 bits (1666), Expect = 5.970e-223
Identity = 326/429 (75.99%), Postives = 374/429 (87.18%), Query Frame = 3 
Query:  918 RINSKGFHGDEKEDLRLEKELFTKE-HTSQGINFDRYDDIPVETSGDNVPEPIESFDSEMLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQFPD--GRRK--SFPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGLVLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTPILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEV 2189
            R+NSKGFHG+E+ D R+E+ELF+KE H   GINF +YDDIPVETSG+NVPEPIE+F  ++LG ELMR T LC Y KPTPVQKYSIPIGIS RDLMACAQTGSGKTAGFLFPTLISLLR GGP++PD  GRR+  ++PVALVLAPTRELASQIYDEARRFCY TG+APVVIYGGAE RSQLRDL+RGCDLLVATPGRL D IERG++SL CI+FLVLDEADRMLDMGFEPQIR IV+  DM+   +RQTFMFSATFPREIQ+LA+DFM DYIFLAVGRVGSASKDVIQ++EY E  +KL  LMRTLS ++  GLVLVFTETKR ADYLE+QL  +  PA+SIHGDK+QRERE+AL+ FK+G++PILVATDVAARGLDI+NVTQV+N+DLPTNIDDYVHRIGR         ALSFMNE+NRN+AREL+++
Sbjct:   78 RVNSKGFHGNERPDPRVERELFSKEGHQQTGINFSKYDDIPVETSGENVPEPIETFPPDVLGPELMRCTELCGYTKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPTLISLLRTGGPEYPDDGGRRQRTTYPVALVLAPTRELASQIYDEARRFCYCTGVAPVVIYGGAEARSQLRDLDRGCDLLVATPGRLVDFIERGKVSLQCIKFLVLDEADRMLDMGFEPQIRRIVQQEDMSL--DRQTFMFSATFPREIQRLASDFMKDYIFLAVGRVGSASKDVIQTIEYCENDQKLEALMRTLSKLDGTGLVLVFTETKRGADYLEHQLRMRSLPAASIHGDKSQREREEALKHFKSGKSPILVATDVAARGLDISNVTQVVNYDLPTNIDDYVHRIGRTGRVGNIGHALSFMNERNRNIARELHDL 504
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BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Match: A0A836CEH0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEH0_9STRA)

HSP 1 Score: 642 bits (1656), Expect = 2.410e-217
Identity = 341/488 (69.88%), Postives = 379/488 (77.66%), Query Frame = 3 
Query:  855 PRNSRWNDXXXXXXXXXXXXGR---------INSKGFHGDEKEDLRLEKELFTKE-HTSQGINFDRYDDIPVETSGDNVPEPIESFDSEMLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQ-----------------------------FPD--GRRKS--FPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGLVLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTPILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEV 2189
            P NSRW D            GR         +NSKGFHGDEK D RLE+ELF KE H   GINF +YDDIPVETSG+NVPEPIE+F  E+LG ELMR+T LC YLKPTPVQKYSIPIGIS RDLMACAQTGSGKTAGFLFPTLISLLR GGPQ                             +P+  GRR+   +PVALVLAPTRELASQIYDEARRFCY TG+APVVIYGGAE R+QLRDL+RGCDLLVATPGRL D IERG++SL CI+FLVLDEADRMLDMGFEPQIR IVE  DM R   RQTFMFSATFPREIQ+LA+DFM DYIFLAVGRVGSASKDVIQ+VEY E  +K+  LMRTL+N +  GL+L+FTETKR  DYLE+QL  QG PA+SIHGDKTQRERE+AL+ FK GQTPILVATDVAARGLDI+NVTQV+N+DLPTNIDDYVHRIGR         ALSFMNE+NRN+AREL+++
Sbjct:    3 PTNSRWTDRGESRGGGGDYGGRGGGGYGAPRVNSKGFHGDEKGDPRLERELFQKEGHQQTGINFSKYDDIPVETSGENVPEPIETFPPEILGPELMRSTELCGYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPTLISLLRTGGPQKQKCLNVPIRSQRSFNNQLPLIAAASAAQYPEDGGRRQRSVYPVALVLAPTRELASQIYDEARRFCYCTGVAPVVIYGGAEARTQLRDLDRGCDLLVATPGRLVDFIERGKVSLQCIRFLVLDEADRMLDMGFEPQIRRIVEQEDMART--RQTFMFSATFPREIQRLASDFMKDYIFLAVGRVGSASKDVIQTVEYCENDQKMDSLMRTLNNCDT-GLILIFTETKRGCDYLEHQLRMQGLPAASIHGDKTQREREEALKYFKNGQTPILVATDVAARGLDISNVTQVVNYDLPTNIDDYVHRIGRTGRVGNIGHALSFMNERNRNIARELHDL 487
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BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Match: A0A7S2V445_9STRA (RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V445_9STRA)

HSP 1 Score: 603 bits (1554), Expect = 2.040e-208
Identity = 318/428 (74.30%), Postives = 364/428 (85.05%), Query Frame = 3 
Query:  918 RINSKGFHGDEKEDLRLEKELFTK-EHTSQGINFDRYDDIPVETSGDNVPEPIESFDSEMLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGP--QFPDG-RRKSFPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGLVLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTPILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEV 2189
            R+NSKGFHG+E  D RLE+ELF + E  + GINFD+Y DIPVE SGDN P+P+  F  E++G +LMR T LCNY KPTPVQ+YSIPIG   RDLMACAQTGSGKTAGFLFP L S++  G P  Q   G RRK+FPVALVLAPTRELASQI++EARRFCY TG+APVV+YGGA+VR QLRDLERGCDLLVATPGRL DL+ERGR+SL  I+FLVLDEADRMLDMGFEPQIR IVE  DMTR  ERQTFMFSATFPREIQ+LAADFM DYIFL VGRVGSASKDV+Q VEYV++ +KL  LMR L  + ++GL+LVF ETKR+ D++E  L  +G+PA+SIHGDK+QRERE AL+ FK G+ PILVATDVAARGLDI+NVT V+N+DLPTNIDDYVHRIGRXXXXXXXXXALSF+NEKNRNVARELYE+
Sbjct:   13 RLNSKGFHGEETPDPRLERELFERPEQQTAGINFDKYFDIPVEVSGDNAPDPVSEFTPELVGEQLMRNTVLCNYNKPTPVQRYSIPIGAQGRDLMACAQTGSGKTAGFLFPVLTSMITNGAPPQQGQGGYRRKTFPVALVLAPTRELASQIFNEARRFCYCTGVAPVVVYGGADVRVQLRDLERGCDLLVATPGRLVDLMERGRVSLLNIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTR--ERQTFMFSATFPREIQRLAADFMKDYIFLTVGRVGSASKDVLQKVEYVDERDKLDSLMRFLQTV-SEGLILVFVETKRSCDHIEDMLLREGFPAASIHGDKSQREREFALKNFKNGRCPILVATDVAARGLDISNVTNVVNYDLPTNIDDYVHRIGRXXXXXXXXXALSFVNEKNRNVARELYEL 437
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BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Match: A0A7S3XUS5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUS5_HETAK)

HSP 1 Score: 602 bits (1552), Expect = 6.540e-208
Identity = 310/427 (72.60%), Postives = 356/427 (83.37%), Query Frame = 3 
Query:  921 INSKGFHGDEKEDLRLEKELFT-KEHTSQGINFDRYDDIPVETSGDNVPEPIESFDSEMLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQFPDG---RRKSFPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGLVLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTPILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEV 2189
            +N+ GFHG  + D RLE +LF  K+H + GINFD+YDDIPVE SG+NVP  IE+F  E++G  LM  T LC Y KPTPVQ+YSIPIG  +RDLMACAQTGSGKTAGFLFP LIS+L +G P  P+     R++ P ALVLAPTRELASQIYDEA+RFCY TGIAPVVIYGGA+VR+QLR+LERGCDLLVATPGRL DLIERGR+SL C+ FL+LDEADRMLDMGFEPQIR IVE  DM R  ERQTFMFSATFPREIQ+LAADFM +Y+FL VGRVGSASKDV Q VEYVE+HEKL  LMR L  +E +GL+LVF ETKR+AD++E+ L  +G+PA+SIHGDKTQRERE AL  FK G+ PILVATDVAARGLDI+NVTQVINFDLPTNIDDYVHRIGR  XXX    AL+FMNEKNRN+AR+LY++
Sbjct:   20 VNAIGFHGRMEADKRLESQLFEQKDHQTAGINFDKYDDIPVEVSGENVPPHIETFSVEVIGERLMANTVLCQYNKPTPVQRYSIPIGKESRDLMACAQTGSGKTAGFLFPVLISMLTKGPPAPPEEGGYARRTHPNALVLAPTRELASQIYDEAKRFCYATGIAPVVIYGGADVRNQLRELERGCDLLVATPGRLVDLIERGRVSLACVNFLILDEADRMLDMGFEPQIRRIVEQEDMPR--ERQTFMFSATFPREIQRLAADFMRNYVFLTVGRVGSASKDVTQRVEYVEEHEKLDHLMRFLQGVE-EGLILVFVETKRSADHIEHMLYKEGFPAASIHGDKTQREREGALANFKNGRCPILVATDVAARGLDISNVTQVINFDLPTNIDDYVHRIGRTGXXXNVGNALAFMNEKNRNIARDLYDM 443
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BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Match: W7TYZ7_9STRA (RNA helicase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYZ7_9STRA)

HSP 1 Score: 602 bits (1553), Expect = 2.120e-205
Identity = 308/428 (71.96%), Postives = 361/428 (84.35%), Query Frame = 3 
Query:  921 INSKGFHGDEKEDLRLEKELFTKEHT-SQGINFDRYDDIPVETSGDNVPEPIESFDSEMLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQFPDGRRKS----FPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGLVLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTPILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEV 2189
            +NS+GFHGD + D RLE++LF + H  + GINFD+YDDIPVETSG+  PEPI SF  +M+G +LM    LCNY KPTPVQKYS+PIG+++RDLMACAQTGSGKTAGFLFPT++S+LR+G P+ P G R S    +P+ALVLAPTRELASQI+DEA++FCY TG+ PVVIYGGAEVR+QLR+LERGCDLLVATPGRL DLIER RISL  I+FL+LDEADRMLDMGFEPQIR IVE   M    +RQTFMFSATFPR+IQ+LAADFM DYIFLAVGRVGSASKDVIQ +EYVE H+K+  L+  LS  +  GL+L+F E KR+ADYLE  L  QG+P +SIHGDKTQRERE+AL  FKTGQ P+LVATDVAARGLDI+NVTQVIN+DLP NIDDYVHRIGR XXXXXXX ALS MNEKN+N+AREL+++
Sbjct:  157 VNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPT--DRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTXXXXXXXHALSLMNEKNKNIARELFDL 582
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BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Match: A0A662X272_9STRA (RNA helicase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X272_9STRA)

HSP 1 Score: 586 bits (1510), Expect = 4.350e-199
Identity = 300/428 (70.09%), Postives = 350/428 (81.78%), Query Frame = 3 
Query:  918 RINSKGFHGDEKEDLRLEKELFTKEHTSQGINFDRYDDIPVETSGDNVPEPIESFDSEMLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQFPD---GR-RKSFPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGLVLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTPILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEV 2189
            R+N  G+HGD +   RLE ELF  +  S GINFD+YDDIPVETSG+NVP+P+  F +E LG E++R   LC Y KPTPVQKYSIPIG+  RD+MACAQTGSGKT GFLFPTL ++LR GG   PD   GR RK FP AL+LAPTRELASQIY+EA++FCY TGIAPVVIYGGAEV  QLR+LERGCD+LVATPGRL DL+ERGRISL CI+FL+LDEADRMLDMGFEPQIR IVE  DM R  ERQTFMFSATFPREIQ+LA+DF+ DYIFL VGRVGSASKDV Q+VEY+EQ++K   L+R L+ ++  GL+LVF ETKR AD+LE  L  +G+PA+SIHGD++QRERE AL  FK+G+TP+LVATDVAARGLDI+ VTQVINFDLP NIDDYVHRIGR         ALS MNEKNRN+ARE+Y++
Sbjct:  115 RVNELGYHGDLRPSERLEHELFG-DAKSSGINFDKYDDIPVETSGENVPDPVLEFSAEELGPEVIRNLELCKYTKPTPVQKYSIPIGLQGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGRGRSRKIFPAALILAPTRELASQIYEEAKKFCYCTGIAPVVIYGGAEVGHQLRELERGCDMLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPR--ERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQ-DGLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREAALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNIGYALSMMNEKNRNIAREMYDM 538
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BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Match: D0MXE0_PHYIT (RNA helicase n=20 Tax=Peronosporaceae TaxID=4777 RepID=D0MXE0_PHYIT)

HSP 1 Score: 584 bits (1505), Expect = 2.550e-198
Identity = 299/428 (69.86%), Postives = 349/428 (81.54%), Query Frame = 3 
Query:  918 RINSKGFHGDEKEDLRLEKELFTKEHTSQGINFDRYDDIPVETSGDNVPEPIESFDSEMLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQFPD---GR-RKSFPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGLVLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTPILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEV 2189
            R+N  G+HGD + + RLE ELF  +  S GINFD+YDDIPVETSG+NVP+P+  F  E LG E++R   LC Y KPTPVQKYSIPIG++ RD+MACAQTGSGKT GFLFPTL ++LR GG   PD   GR RK FP  L+L+PTRELASQI+DEA++FCY TGIAPVVIYGGAEV  QLR+LERGCDLLVATPGRL DL+ERGRISL CI+FL+LDEADRMLDMGFEPQIR IVE  DM R  ERQTFMFSATFP EIQ+LA+DF+ DYIFL VGRVGSASKDV Q+VEY+EQ++K   L+R L+ ++  GL+LVF ETKR AD+LE  L  +G+PA+SIHGD++QRERE AL  FK+G+TP+LVATDVAARGLDI+ VTQVINFDLP NIDDYVHRIGR         ALS MNEKNRN+ARE+YE+
Sbjct:  113 RVNELGYHGDVRRNERLEHELFG-DAKSSGINFDKYDDIPVETSGENVPDPVTEFAEEQLGPEVIRNLELCKYSKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPR--ERQTFMFSATFPCEIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQ-DGLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYEL 536
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BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Match: A0A0W8D9G7_PHYNI (RNA helicase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D9G7_PHYNI)

HSP 1 Score: 589 bits (1518), Expect = 3.200e-198
Identity = 301/428 (70.33%), Postives = 350/428 (81.78%), Query Frame = 3 
Query:  918 RINSKGFHGDEKEDLRLEKELFTKEHTSQGINFDRYDDIPVETSGDNVPEPIESFDSEMLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQFPD---GR-RKSFPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGLVLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTPILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEV 2189
            R+N  G+HGD + + RLE ELF  +  S GINFD+YDDIPVETSG+NVPEP+  F  E LG E++R   LC Y KPTPVQKYSIPIG++ RD+MACAQTGSGKT GFLFPTL ++LR GG   PD   GR RK FP  L+L+PTRELASQI+DEA++FCY TGIAPVVIYGGAEV  QLR+LERGCDLLVATPGRL DL+ERGRISL CI+FL+LDEADRMLDMGFEPQIR IVE  DM R  ERQTFMFSATFPREIQ+LA+DF+ DYIFL VGRVGSASKDV Q+VEY+EQ++K   L+R L+ ++  GL+LVF ETKR AD+LE  L  +G+PA+SIHGD++QRERE AL  FK+G+TP+LVATDVAARGLDI+ VTQVINFDLP NIDDYVHRIGR         ALS MNEKNRN+ARE+YE+
Sbjct:   44 RVNELGYHGDLRRNERLEHELFG-DAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPR--ERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQ-DGLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYEL 467
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1015.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH21_ECTSI1.920e-26777.08RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JCH1_9PHAE5.240e-26288.94RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A835ZB12_9STRA5.970e-22375.99RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A836CEH0_9STRA2.410e-21769.88P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2V445_9STRA2.040e-20874.30RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonic... [more]
A0A7S3XUS5_HETAK6.540e-20872.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TYZ7_9STRA2.120e-20571.96RNA helicase n=4 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A662X272_9STRA4.350e-19970.09RNA helicase n=1 Tax=Nothophytophthora sp. Chile5 ... [more]
D0MXE0_PHYIT2.550e-19869.86RNA helicase n=20 Tax=Peronosporaceae TaxID=4777 R... [more]
A0A0W8D9G7_PHYNI3.200e-19870.33RNA helicase n=1 Tax=Phytophthora nicotianae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1015contigC-tenellus_contig1015:471..9467 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LH21
Preferred nameDDX3X
PFAMsDEAD,Helicase_C
Model size2189
Max annot lvl2759|Eukaryota
KEGG koko:K10268,ko:K11594,ko:K17642
KEGG Pathwayko04622,ko05161,ko05203,map04622,map05161,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000278,GO:0000280,GO:0000375,GO:0000377,GO:0000390,GO:0000398,GO:0000819,GO:0001558,GO:0001775,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0002164,GO:0002165,GO:0002168,GO:0002181,GO:0002183,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003729,GO:0003743,GO:0003824,GO:0003924,GO:0004003,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005777,GO:0005829,GO:0005886,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006996,GO:0007049,GO:0007059,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007346,GO:0007431,GO:0007435,GO:0007552,GO:0008026,GO:0008047,GO:0008094,GO:0008104,GO:0008134,GO:0008135,GO:0008143,GO:0008150,GO:0008152,GO:0008186,GO:0008190,GO:0008219,GO:0008380,GO:0008625,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009886,GO:0009887,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010466,GO:0010467,GO:0010468,GO:0010494,GO:0010501,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010623,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010950,GO:0010951,GO:0010952,GO:0012501,GO:0012502,GO:0012505,GO:0014070,GO:0016020,GO:0016043,GO:0016055,GO:0016070,GO:0016071,GO:0016192,GO:0016246,GO:0016441,GO:0016442,GO:0016458,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017148,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019827,GO:0019867,GO:0019887,GO:0019953,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0022612,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030177,GO:0030234,GO:0030295,GO:0030307,GO:0030308,GO:0030718,GO:0031047,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031332,GO:0031333,GO:0031369,GO:0031399,GO:0031401,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031983,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032392,GO:0032479,GO:0032481,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032642,GO:0032648,GO:0032722,GO:0032728,GO:0032940,GO:0032984,GO:0032988,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0033592,GO:0033674,GO:0033993,GO:0034063,GO:0034248,GO:0034249,GO:0034250,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034774,GO:0035070,GO:0035071,GO:0035072,GO:0035075,GO:0035078,GO:0035081,GO:0035194,GO:0035272,GO:0035556,GO:0035613,GO:0035770,GO:0036098,GO:0036230,GO:0036314,GO:0036464,GO:0036477,GO:0040008,GO:0040029,GO:0042119,GO:0042221,GO:0042254,GO:0042255,GO:0042256,GO:0042325,GO:0042327,GO:0042579,GO:0042623,GO:0042981,GO:0043021,GO:0043024,GO:0043025,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043086,GO:0043154,GO:0043170,GO:0043186,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043273,GO:0043280,GO:0043281,GO:0043299,GO:0043312,GO:0043539,GO:0043549,GO:0043603,GO:0043604,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045069,GO:0045070,GO:0045087,GO:0045321,GO:0045495,GO:0045727,GO:0045787,GO:0045859,GO:0045860,GO:0045861,GO:0045862,GO:0045893,GO:0045926,GO:0045927,GO:0045931,GO:0045935,GO:0045937,GO:0045944,GO:0045948,GO:0046483,GO:0046677,GO:0046685,GO:0046903,GO:0048027,GO:0048102,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048707,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050792,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051276,GO:0051336,GO:0051338,GO:0051345,GO:0051346,GO:0051347,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0052547,GO:0052548,GO:0060033,GO:0060205,GO:0060255,GO:0060293,GO:0060548,GO:0060828,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070035,GO:0070717,GO:0070727,GO:0070887,GO:0070925,GO:0071103,GO:0071214,GO:0071236,GO:0071243,GO:0071310,GO:0071396,GO:0071470,GO:0071649,GO:0071651,GO:0071704,GO:0071826,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0090068,GO:0090263,GO:0090304,GO:0097159,GO:0097190,GO:0097191,GO:0097193,GO:0097305,GO:0097306,GO:0097307,GO:0097308,GO:0097458,GO:0097617,GO:0097708,GO:0098588,GO:0098727,GO:0098772,GO:0098805,GO:0098813,GO:0099503,GO:0101002,GO:0104004,GO:0140014,GO:0140097,GO:0140098,GO:0198738,GO:1900087,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901654,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902532,GO:1902680,GO:1902806,GO:1902808,GO:1903047,GO:1903506,GO:1903508,GO:1903608,GO:1903900,GO:1903902,GO:1904813,GO:1905114,GO:1990904,GO:2000045,GO:2000112,GO:2000113,GO:2000116,GO:2000117,GO:2001056,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Exons9
Evalue8.72e-230
EggNOG OGsCOG0513@1|root,KOG0335@2759|Eukaryota
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-06_010920.1
EC3.6.4.13
Descriptionhelicase activity
Cds size1098
COG categoryJKL
BRITEko00000,ko00001,ko01000,ko03019,ko03036,ko03041,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1015.1.2prot_C-tenellus_contig1015.1.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1015 471..7067 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789117.7666564-CDS-C-tenellus_contig1015:470..6111680789117.7666564-CDS-C-tenellus_contig1015:470..611Choristocarpus tenellus KU2346CDSC-tenellus_contig1015 471..611 -
1680789117.8847146-CDS-C-tenellus_contig1015:3378..35221680789117.8847146-CDS-C-tenellus_contig1015:3378..3522Choristocarpus tenellus KU2346CDSC-tenellus_contig1015 3379..3522 -
1680789117.8954544-CDS-C-tenellus_contig1015:4066..42041680789117.8954544-CDS-C-tenellus_contig1015:4066..4204Choristocarpus tenellus KU2346CDSC-tenellus_contig1015 4067..4204 -
1680789117.9033298-CDS-C-tenellus_contig1015:4608..47641680789117.9033298-CDS-C-tenellus_contig1015:4608..4764Choristocarpus tenellus KU2346CDSC-tenellus_contig1015 4609..4764 -
1680789117.9132147-CDS-C-tenellus_contig1015:5725..58961680789117.9132147-CDS-C-tenellus_contig1015:5725..5896Choristocarpus tenellus KU2346CDSC-tenellus_contig1015 5726..5896 -
1680789117.9237933-CDS-C-tenellus_contig1015:6375..65311680789117.9237933-CDS-C-tenellus_contig1015:6375..6531Choristocarpus tenellus KU2346CDSC-tenellus_contig1015 6376..6531 -
1680789117.9343204-CDS-C-tenellus_contig1015:6875..70671680789117.9343204-CDS-C-tenellus_contig1015:6875..7067Choristocarpus tenellus KU2346CDSC-tenellus_contig1015 6876..7067 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789117.9499264-UTR-C-tenellus_contig1015:7067..71361680789117.9499264-UTR-C-tenellus_contig1015:7067..7136Choristocarpus tenellus KU2346UTRC-tenellus_contig1015 7068..7136 -
1680789117.9591975-UTR-C-tenellus_contig1015:8077..82761680789117.9591975-UTR-C-tenellus_contig1015:8077..8276Choristocarpus tenellus KU2346UTRC-tenellus_contig1015 8078..8276 -
1680789117.9689114-UTR-C-tenellus_contig1015:8644..94671680789117.9689114-UTR-C-tenellus_contig1015:8644..9467Choristocarpus tenellus KU2346UTRC-tenellus_contig1015 8645..9467 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1015.1.2

>prot_C-tenellus_contig1015.1.2 ID=prot_C-tenellus_contig1015.1.2|Name=mRNA_C-tenellus_contig1015.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=366bp
MLGSELMRTTTLCNYLKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFL
FPTLISLLRRGGPQFPDGRRKSFPVALVLAPTRELASQIYDEARRFCYRT
GIAPVVIYGGAEVRSQLRDLERGCDLLVATPGRLGDLIERGRISLCCIQF
LVLDEADRMLDMGFEPQIRHIVEDGDMTRVGERQTFMFSATFPREIQQLA
ADFMTDYIFLAVGRVGSASKDVIQSVEYVEQHEKLPMLMRTLSNMEAKGL
VLVFTETKRNADYLEYQLTNQGYPASSIHGDKTQREREDALRLFKTGQTP
ILVATDVAARGLDINNVTQVINFDLPTNIDDYVHRIGRTGRVGNIGNALS
FMNEKNRNVARELYEV
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mRNA from alignment at C-tenellus_contig1015:471..9467-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1015.1.2 ID=mRNA_C-tenellus_contig1015.1.2|Name=mRNA_C-tenellus_contig1015.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=8997bp|location=Sequence derived from alignment at C-tenellus_contig1015:471..9467- (Choristocarpus tenellus KU2346)
GATAGTTGTATTGATGTGTGGGTGTTCACCACCACATCCTCTCAGCTCTA
GCAAAGGACCCCTTCCCATCTTCAAAAACGGAGGTTATTACATTGATGGT
CTGTCGTTGAGTGTAAAAATATTACATGGTCCAATTTTTCCTCGGTCAAG
GCTGATTGCAAATTCCTCAGGAATCGGTGAACATCTCAACTGGTGACCTG
AATGCACGACAGGAGTAGGTGGCATGGAGGGTTGAGCTCTCTCAGGGCCG
AGGACCAACCCTGTTTACAACTATCGTGTTCGTTTCGATGTGGATGCAAG
GCCTAGAAGAACTTTGATGGGGGTGTCACAATGAATATTTCGTGTGAGAA
GGCGAAATGATTTCTTTCACGCCCCAGACCCCCCCTTCCTCACTTACCCT
CTCATGGCCACGCCCGCCTGAGCTTTAAACATTACGCAATTCATGGACCT
TACGCTAGTCAGTCCGTGCTTCTCCACCTTTAGGATAGTAGAAAGTCCAA
GTCTTTCTATTGGACTAAATCTCCTTTCCTCGTTCCTTTTCTTTAACGCC
GTTGCCTTCTGTAGGAAACAAGTACGTCCCACCGCACCTGAGGGGTGGTG
GGAGCGACGCTAGTGGTGGCGAGGGCTCAGGTCTTGGCCCTGCCCCTATT
GACGGTGGAAGTGCCCCGGTTGGGGCCTGGGGCCCTCGCCCAGGAGGCGG
TGGGGGTGGTCACCACGGTGATAGAGGGTACGACCGTGGGGGAGGCTATG
GGGGTGGAGGTGGTGGCTACGAGCGCAGTGGGGGTTATGGTGGTGGGTAC
AGTGGTGGAGGCGGTGGCCGGGGGTGAGTTACAGCCCGTAGAGGATACCG
CCGATTTTCGATTTTATACATGATAGCAATCCCCACTCTGGATTGAGTTG
ACAAGGCAAATAGTAGAATCGTAAGGGGTGAAGAACTTCACTCGTTCTCA
ACTGTTAATGATTTTTTGTTATTGGCATTGAAGAGTGTGGCCTTACCCCT
ACTTTATGTGATTATATTCCTCTCTTGCATGCAGTTTTTTGTAGCACATG
GTACTTTCCTACGGTAGCAATCTCCTCCATCCCCTTGTAAGAAAAGTAGT
TTCCATGCATGAGCCTTTTTCATCCTGCCTACAAGCTCCACAACTCACCC
CCCCCCTTTGTTAATTGTGTTCTGTGCATCTTTGGCTACAGCTGGGACAA
TTCTAGGGATACGCGCCCACCCCCTCGCAACTCACGTTGGAACGACGGGG
GTGGTGGTGGTGGTGGTGGTGGACGTGGAGGTGGGCGCATAAACTCTAAG
GGTTTCCATGGGGATGAGAAGGAGGACCTTCGCCTTGAGAAGGAACTCTT
TACGAAGGAGCACACCAGCCAGGGGATCAACTTTGATCGGGTATATTAGG
TGTTAGAAGCAAGTGACTGAGCGTACCTTCACATCTAGACATCGCATACT
GGTTTGAGTTGGTTTGTGATTGGTGACAAATAATGTCAACGATTGGAAAA
TTCCACAAGATTTGACATGGATAGCTATGCCGTAGATGTGCTTTTTCTGT
TCTTACTATTTGAATCTTCAGTTATTGCCGTAACTGGAAGTATGACCAAG
GTGTGAGGGATCATCCATGCCATTTTTTTTTATTTTGTGGGTGAGTAGAG
GTGCATTTTTGCAAGACATCCTGGAGTGTCCTGCCCTATGATGAAGATGA
GGTAATTTGTTATCTTTGTTCCTGTGTCCTCTAAACTGCCCCTCATACCC
CTCCTCATGTCCTTCACAACACTGCACAGCATTCCATCAACAAGCTCCAC
CCCTGAGACTTTTTCGTTCTCTCCATTCCGTATGCACCCTTGCATTAAGA
GTCCATTGCCTAACCTGTCTGCCAATCCATAGTACCAAACTGCATGATTG
CCTTACAGCCTTCATCTTTCCCTGCTTATTCTTCTGATCTCACCCTCTCA
TTGGTTGTTGTAATTTTCTGCATGGCATTCATTTCCATTTTGCTATCCAT
TCTACACAATACTCCCACTGTCAGAGCATTCCCCATGGTTTGACACAACC
TCTTGCCCTTCATATCTTACTGCAAGTGATTCTGTGCTTTGGCCACACAT
AAATGAACACCCAATGCCTAAGTGTCTTCCTCAGACGTTTGCCTTGTCAT
CCTCGCAAGTCCAGGATTCCTTCCAAGGGAATAAAACACATCTTCTATCC
CTCTATCTGCATGCTTTCCCATGCTCTGCAAAGAGGCATGTTGCCCATGC
TCCTCTACTTGAACTCTCTTTCCGTGAACCAAACCTCATTCTATCCCTTT
TGAATCATATCTGTTCCTGCTCTTTTGTCAGTACGATGATATTCCAGTAG
AGACAAGTGGTGACAATGTGCCGGAGCCCATTGAATCATTTGACTCGGAG
ATGCTGGGTTCAGAGTTGATGAGGACCACGACCCTCTGCAATTACCTGAA
GCCTACTCCTGTCCAGAAGTACTCTATTCCTATCGGCATCTCGAATCGGG
ACCTTATGGCCTGTGCTCAGACGGGCTCTGGCAAGACTGCTGGTTTCCTA
TTCCCTACCCTCATTTCACTGCTTAGGAGAGGAGGCCCGCAGGTGGGGTG
GCTGCAGGAATGAGGAATGATTTGTAGAGGGAGAGGAATGATTTGGAGAG
GGCGAGGAATGATTTGGAGAGGGAGAGAATATGTTTCTCGTCTAAGTGAG
AAACGATTTTATATTAATGCTGGAGATTGCCTTACTGGGTGTTTCCTGGT
GTGGATGTTTGCCCATTTCGTCTTGTGAGGTGTGCAAGATGATGATGCTC
GGTTGCTGTCGATTGTGTTTTGTTTTGTTTTGTCTCTTTCCCCATCCTTA
TCTTGATATGTTTTTCTCTACTCTTTTTCCCATTACATCGTTTTTGGTTC
CATCTTGCGCCATCCCTTCGTTCTGACTTTCTGCAGTTTCCTGATGGGAG
GCGCAAGTCCTTCCCAGTGGCACTGGTGCTTGCACCCACCCGTGAGCTGG
CATCTCAGATTTATGATGAGGCGCGCCGTTTTTGCTATCGCACTGGCATT
GCACCAGTTGTCATCTACGGCGGTGCTGAAGTTCGTTCCCAGGTGTGATT
TCCCCCCTCCTCTCCCTATGCCCCTTTGTGTAGTTACACAAAGTTGAGTC
GGATCTGAACCTGATTATTACCTCCAAATTGTGTCTTTTTTCTGGTATCA
ATTCCCTGTCTGAACAATTGTAGTTTCTTTTTGAATCAGGGGAGTGATCC
CCTGTGTTTGTGCTGTATTTTTTGTATTTTTTTCTGTGTGACGAAGTTTA
TTTTTTGAAAACAGAAACAAGTTGATGGAATTTATAGCCCACCCCCCCTT
TTCTGAAATAGAATAGATGAAACCTAATATTGTGGAAGTAACCACATCAA
GGCCCAACCACTGCGTGCAAGAACAGTAGACTTGAAAACAGCTTTTTTTG
TATCATGGCTGATGTCCAACACATTGTCTCCCTTCTGTGCTGTATGCACC
TGACCCTCTTGCCCTGTTGGTTATTTCTATGTGCTACACTGCCCTGCCCC
ATTTTTTGATGAGAACAACAGCTGCGAGATTTAGAGCGCGGCTGTGATCT
CCTGGTGGCTACGCCAGGTCGCCTGGGGGACTTGATTGAACGTGGGCGAA
TCTCCTTATGCTGTATCCAGTTTTTGGTGCTTGATGAGGCAGACCGCATG
CTGGATATGGGGTTTGAGCCCCAGATTCGTCATATTGTGGAGGTATGCAC
TTTTGGGGGACAAGAGATGGGTTTGGGTGATAGTTAGGTTCAGGTTGCGT
TGTTTTAGGGTGTGTGTGGTCATCACATACGATCATAAAAGGTATGGTCA
ATACATGAAGAGAACAGTGGGGTAGTAGATATTGTGTCGAGTTATAGATG
AAAAAAATATACTCTGGTTTGAATTCTATTGACACAATAGTGTGCTGTAC
TTTTAGTTGAGTGCAGTATCTCTGAAGTGGTATATCTGTACAACATGAAC
CTTGACAGTAGATTCTGAATTATTGGGACTGATACACCTGATACGGTACA
GAGCACCCTTTGCTGTTGGGTTTATGGGGGCTATGACACATGGTATAACT
GATTTTGATATTGGTTTGGTGGTTGCACACTTGATTGTGTAGAAAGTATT
GGTTTAGATGTGGTTGTCTTTTTGTCGGCTATAAAGTATGACTACGGTAC
TGTTAATGGTACATGTCAGACCGGTAATACTGTTGTTTGTAATGGTCAAT
TTCGTAGCATTGTAGATTCCACTTTGCTGACCTCTAATTTCTTGTTTGGT
GGAAACTGGAAATTTCCTCCATTAGTCGGTGGTCCACTCAGAAAATGGGT
TGTATTTTTATAATGATAGGGGTTCAAGGGTGGGCCACCTTTCCACACTG
CCTGTATGGGGAGGTATGGTGGTGTGTGTAACCATGTTCTGGTCTGAGAG
AGAGATTGCCTGCCAAGTACTTGATTTACAGGCGGTGTGTAATGATTGGT
TAATGTTGATCAGGTGGAGTCAGCAAAACAGGAATAGTCATTGGTAGCAA
ATGTTTTGGTATGTATAGGTCACATACATGAAGCATGGAAGCCCTTTTCC
TCAAGAGCACATGTTCAGGAAGGCATTTTTTTAATACGTGTGTTGATCAT
AACTTGTAACTTTGAACCTAGCCCTAACTCATTGCTTCTGTATTTACTGA
AAGGATGGAGACATGACCAGAGTTGGAGAGAGGCAGACATTCATGTTCTC
GGCAACATTCCCGCGTGAGATCCAGCAGCTGGCAGCAGACTTCATGACTG
ACTACATTTTCCTGGCTGTGGGACGTGTTGGTTCTGCTTCCAAGGATGTG
ATACAGTCGGTGTGTATATGTGTATGTCCCTGGGTCATAAGGGTTTGTTG
GGGTCAGGATTGGGATTGATGTATGTTCATGGATGTTGAGAGGAATGTGT
ACACATTTGTTAATGCTTGTGTTTTTTTTGTTTTTGGTGTTGCCACTGTG
GACAACTTGGGTTTTTGTACATTTCAGCATTATTACTCCTTTTGATATTT
TTTTTGCACTTCTTTTAATGATTTTATTCAAGTGTCCACGGTCTAACTTA
CTGTTGCCTGTGTGTGTTGAGGCCTGAGGCACATCCAACCCCTCAGATAT
GCCTTGACCTCAATGTCAGGTGTGTACACTTTCATCCCCCTTTTATCATC
ATTTTGACTTTTTGATAGGAGAAGAATTGACTTAATTTATATTTTTACAT
TGTTTGGCTACAGGTGGAATATGTAGAGCAACACGAGAAGCTGCCGATGT
TGATGCGTACTCTAAGCAATATGGAGGCTAAGGGTTTAGTCCTAGTGTTC
ACTGAGACCAAGCGCAATGCAGACTACCTTGAGTACCAGCTCACAAATCA
GGTAGTGTTACCCCACTATCTAATTTTATCCACTTGCGTTGGTCCAGAAG
TGTGTCTTCATGTGGGGAGGTTTGTGTGCTGAAAGTATGAATGTGATCTT
ATCTGAGTGATGGTTCCAGTGTTCCTTTCACCTCCATCCTCCCAGGCATA
TTCCTGTGAATGCCCTATTGGTTACTGGTGAGGGAAGCCAGGTATTTTGT
GGTGGGACTATGCCCTGGAATGATAGGATGCTGTGAGATTGGCATTTGAT
AGTGGTCTGTTAAGCTGCGCATCAGATAATAGGTAGTACCATTATTTGTT
TGCTGGTTGGTCATGCTAAAGATGCTGCTAGTTTATGTTCTATCAAGTAT
TCTTGTGCTGAACAGTCGAGGTTATAATGACATAGTAGTACTGCTCTGCT
GTTCTGTTTGGTATTGTTACTGAGATATTTTTTTATTACCAATCCTCCTT
CCTGCCCTCTTTGTTGCACATTAACGACAATCTACGAGCATCTCCATCTC
CATTAAAATATTGAACCTCCTTGTATTATATTTTTTTAAATATAGGGCTA
TCCAGCAAGTTCCATCCATGGGGATAAGACACAGCGTGAACGAGAGGATG
CCCTCCGCCTGTTCAAGACCGGACAAACCCCTATCCTTGTGGCTACTGAT
GTTGCTGCTCGTGGACTGGACATCAACAATGTTACGCAGGTAAGCTGCAA
GAAGAGTAATGTTGGGAATCGTGACAATTCGGTTGTTTCACTTCATTTTA
CTGACATTGCAACGGAGAATATCTGATTAGTGCATATCATTTTCTTGCTT
GCTGTGCAATCCCCAGTAGTATTCCTCACTGTCCCTTTTTGGAACTTGTG
CTTTGCACGTGTGTTGGTTTATTCAATTTCATTAGTACACCCTGAGCTGA
TTTTTAATTGATATTACATGATTATTGCTTGTCACATGTCTAGTCAACAC
TGTATCAAGCTCTCTTTTACCCCCCCTTTCCTCCATTTCCTTCTCCCCCC
TCACCTCCAATATTCTCCGTAGTTCTTGTTTCATTCATATACTTTTGGGC
ATATATGTTCATATATGTTGGGTATGGTCGAGAGATCAATTGAGGGTGTT
TTTTCTCTAGCATGTCAACAATGTTGAAGATTGAGGTGTGTTGTCCATTG
CAACTAAATTCTTTTACTCCTTCCACACATCAAGTTTTTACCCTGAGACT
AAAAATATAGAATGCATCAATGCATGTATTGTTGTAAAGGTTACAAGTCA
GTCAAACAATAGTTTCAAAGATATTTTGCCCTGAACAAAAATGTACAGTG
CAGTACCAATTTTGGTAGGTTGTTATGCGATAAAGAGTGCACAATGGTTT
TGTACCTTTGTTCAGATCGAGCTCTTCAAGACGTAGGTGTCACTTATTCC
AGTAACGACCCAAGAAACTAGCAATCAATGTTTGTATCATTTGGGGGAAT
TGAAAGTACATTTTGGTGACTTTTAAGTGGAGAATCTACGCAACAGATAC
ATCCATTTATTTATTTATTGAGAGTGTAGTTCTGGAAGGATAAACTGAAT
CTAAGATTGCTACTTCTCAAATTGTTGGGAGAAGTTGGTTTGTCAAGAAA
ATGATGCCTAGAGTTGCTTCTCAAAATAGCTCTGGACCACTCTTGATTTG
GTATTAAATAACGTGCCGTCAGCCCTTGGGGACTTTGGAGCTTGTGGCAT
GAGGTCTTTATGTTGCTTGTTGTTCAGTCTGTGCATACTTGTTTCTCTGG
TAGATGCAGCACAGTATTTTCAATGGACTGACCTCCTCATTCTGACTTGT
TCCTGAATATGGGTGGTGCCACACATGTCATGCAAAGTGTTATGGTTAGG
CTTGGGTGTTTGCTGTTCGCCAGTATGCCAGATTGGACCAATTTTTATCA
TCTTGGCAGGATTTGGGATGATCATGTCCTAATATTCTTTTAATTTCTTG
ATAATAAAGTGAAGAGACTGGACATGGAATCCGCTCATTGTGGTGGTCAG
TGCGGTTTTGTCTTGACTTTCACTTCCTTGTAGTTGATGGGATATTTCCA
TGCACACAAGAGTAAAATAAGGGCTCAATGGACAATGGGCTCTACATGTG
GTTTTGATATCTTGACATGAGAAAGTGATAACTTCTTCAATTTTTTATTT
TTTTAAATTTGAGTTTTGCACACCCCAAGGCTAATTGTGAATTCATGACT
AGTTTGCTCTATGTGGCAAGGAAATGTGCTCTCCTACCTGGGTACATTTT
AATTGTGTCCTTGATAGTTCTAGACAGTGTGCTGTCTTTTTCAGGATCTA
GTTTGTTGGAATGTTGGAAAATAGAAAATCCTCACACAGTTGTGTCATTA
CTGGTCATTTAAGTCTTTTTGCTTGACACAGAGTGCACTTATGTAAATGT
ATTTTTACAGACCTGTAAATATTCTGGTCTTCTAGTGGTTTCTAAATGTA
CTGGCCTGGCCAGCTTAAAAGATTACTATCACCAATCCTGGCCCAGGTAG
ATCGCATTTTTCACAGGCTTGACCTTTACTTTCCTGACTGACCTCTGACT
ATGATGAAATCTGTTTCATATTTTAATGTAAAAAAATGCTGCTATTGGAG
CTCTACTCTTTAATATAGAATGATATCATGTATCACAAGCAACCTGTCTG
GTCTGGGACAACCAACCTGAAACTCAGCCTAGTCCTCTTCAATGATCTCT
TGTCCAAGCCTGTGTGCAATCCCCTAGTCACTGGTTTTTAGTGAGCAGCA
TGTTCAATCTTGGTTGAGTTTGATTGGTAGTATAGTTTTACTGTGTTGGA
AACAGTTGATGGTATTGTAGGTGTAAGCTTGTTGTATGATAGACAATAAT
CTTTACACTCTGGTGTCATTCTGTCTTGCTAAACACCATGAAATATACTG
AACATTTCTGATTTTTACAAATTTTGTGGAATGTGGACCTCACAATTTTC
TGACAGCCTTGAATGAGACTTGTCAGAAATACTCGCATCCGAATCAACCT
GTAAAGCGGGTCATGGAAATATTTGGTGTCCTTGAATCATATCATTTTTT
CAATTCTCAGAACAGTTCGATCTGCAGATTGTTTACATCATCCCAGGCGT
ATGAGAGCCCTAGATTATATTATATTATATTTGGGGGGGAGTATTCTTTG
CGCTCTAGTGCTCCTAACTTACTCCACTATTGGGAATTAATTGCATGGCT
GAATTTTGCTGACGTACCCTAGTCACAAGGCCCTCTTTACCTCATCCTTT
TTTAATATTTTTCTTCGCCTTGAATAGTCCTTAACAATACGTTGTGTACT
GGGAATTTGTGAAAAGTCTAGTTGCAGGTGTTCTTCCCTCTCCATGCCTC
TGGGTAATCCCTTAGTTCTAATGCTCCACACACGCACGCCCTTCTCCTGT
TGGACGTTGATTGGGTTCTGGTTTGTCTCCTATTCTATTGATACTTGTGT
CTTCAGGTGATCAACTTCGACCTCCCAACCAATATTGATGACTACGTGCA
TCGCATTGGTCGGACGGGTCGTGTGGGCAACATTGGTAATGCGCTATCGT
TCATGAACGAAAAGAATCGCAATGTTGCAAGGGAGCTCTATGAGGTC
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Coding sequence (CDS) from alignment at C-tenellus_contig1015:471..9467-

>mRNA_C-tenellus_contig1015.1.2 ID=mRNA_C-tenellus_contig1015.1.2|Name=mRNA_C-tenellus_contig1015.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1098bp|location=Sequence derived from alignment at C-tenellus_contig1015:471..9467- (Choristocarpus tenellus KU2346)
ATGCTGGGTTCAGAGTTGATGAGGACCACGACCCTCTGCAATTACCTGAA
GCCTACTCCTGTCCAGAAGTACTCTATTCCTATCGGCATCTCGAATCGGG
ACCTTATGGCCTGTGCTCAGACGGGCTCTGGCAAGACTGCTGGTTTCCTA
TTCCCTACCCTCATTTCACTGCTTAGGAGAGGAGGCCCGCAGTTTCCTGA
TGGGAGGCGCAAGTCCTTCCCAGTGGCACTGGTGCTTGCACCCACCCGTG
AGCTGGCATCTCAGATTTATGATGAGGCGCGCCGTTTTTGCTATCGCACT
GGCATTGCACCAGTTGTCATCTACGGCGGTGCTGAAGTTCGTTCCCAGCT
GCGAGATTTAGAGCGCGGCTGTGATCTCCTGGTGGCTACGCCAGGTCGCC
TGGGGGACTTGATTGAACGTGGGCGAATCTCCTTATGCTGTATCCAGTTT
TTGGTGCTTGATGAGGCAGACCGCATGCTGGATATGGGGTTTGAGCCCCA
GATTCGTCATATTGTGGAGGATGGAGACATGACCAGAGTTGGAGAGAGGC
AGACATTCATGTTCTCGGCAACATTCCCGCGTGAGATCCAGCAGCTGGCA
GCAGACTTCATGACTGACTACATTTTCCTGGCTGTGGGACGTGTTGGTTC
TGCTTCCAAGGATGTGATACAGTCGGTGGAATATGTAGAGCAACACGAGA
AGCTGCCGATGTTGATGCGTACTCTAAGCAATATGGAGGCTAAGGGTTTA
GTCCTAGTGTTCACTGAGACCAAGCGCAATGCAGACTACCTTGAGTACCA
GCTCACAAATCAGGGCTATCCAGCAAGTTCCATCCATGGGGATAAGACAC
AGCGTGAACGAGAGGATGCCCTCCGCCTGTTCAAGACCGGACAAACCCCT
ATCCTTGTGGCTACTGATGTTGCTGCTCGTGGACTGGACATCAACAATGT
TACGCAGGTGATCAACTTCGACCTCCCAACCAATATTGATGACTACGTGC
ATCGCATTGGTCGGACGGGTCGTGTGGGCAACATTGGTAATGCGCTATCG
TTCATGAACGAAAAGAATCGCAATGTTGCAAGGGAGCTCTATGAGGTC
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