mRNA_C-tenellus_contig10129.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10129.2.1
Unique NamemRNA_C-tenellus_contig10129.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: D8LAY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY7_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 5.590e-41
Identity = 64/96 (66.67%), Postives = 83/96 (86.46%), Query Frame = 1
Query:    1 WLIVGIFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288
            WL+V  F HE+W+ LQHAN+LLNP CQRLDR+YGI LL+RR+YWVIAGVL+AYW+RE+ SM ++ PYAS +T +MV +SS YH+GKI+LIS+DA+R
Sbjct:  163 WLVVATFAHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQR 258          
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A6H5JPB7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB7_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 9.350e-41
Identity = 64/96 (66.67%), Postives = 82/96 (85.42%), Query Frame = 1
Query:    1 WLIVGIFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288
            WL+V  F+HE+W+ LQHAN+LLNP CQRLDR+YG+ LL+RR+YWVIAGVLSAYW+RE+ SM ++ PYAS +T +MV  SS YH+GKI+LIS DA+R
Sbjct:  163 WLVVATFVHEVWLLLQHANILLNPLCQRLDRSYGVGLLRRRLYWVIAGVLSAYWSREVLSMLIASPYASPLTLKMVATSSLYHVGKIILISRDAQR 258          
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A836C6P6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6P6_9STRA)

HSP 1 Score: 139 bits (349), Expect = 3.040e-38
Identity = 61/96 (63.54%), Postives = 77/96 (80.21%), Query Frame = 1
Query:    4 LIVGIFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARRG 291
            L+  + +HE+WV LQH NVLLNP CQRLDR YGI+LLK+R YWVIAGVL AYW REI SM  ++PY + +T+ M+ VS  YHLGKI+L+S+DA+RG
Sbjct:   40 LVALLLVHEVWVMLQHLNVLLNPLCQRLDRGYGISLLKKRQYWVIAGVLGAYWLREILSMLAALPYTAPLTSNMIAVSCVYHLGKIILVSIDAQRG 135          
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A7S4KNY6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KNY6_GUITH)

HSP 1 Score: 127 bits (320), Expect = 5.370e-33
Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 1
Query:   16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288
            +F HE+W+ +QHANVLLNP+ QRLDR YGIALL++R YWVIAGVLSAYWARE+ SM L   Y S  T  M+ +S  YH+ KI L+S+DA R
Sbjct:  107 LFAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRFYWVIAGVLSAYWAREVLSMMLCYSYVSDATKTMIMMSCIYHIAKICLVSLDAAR 197          
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: L1J6G4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6G4_GUITC)

HSP 1 Score: 118 bits (295), Expect = 8.290e-29
Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 1
Query:   16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKIL 264
            +F HE+W+ +QHANVLLNP+ QRLDR YGIALL++R YWVIAGVLSAYWARE+ SM L   Y S  T  M+ +S  YH+ K++
Sbjct:   99 LFAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRFYWVIAGVLSAYWAREVLSMMLCYSYVSDATKTMIMMSCIYHIAKVI 181          
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A812Q1W1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812Q1W1_9DINO)

HSP 1 Score: 115 bits (289), Expect = 2.250e-28
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 1
Query:   16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARRG 291
            +F+HE WV LQHANVLLNPFCQRLDR YG+++L++  +WVIAGVL  YW+RE+ SM L + + S  T   + VSS YHL K+  I  DA+RG
Sbjct:  334 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSMLRKGQHWVIAGVLVMYWSREVISMLLCLAFTSPRTQLAILVSSGYHLVKMQSICCDAQRG 425          
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A1Q9D0R3_SYMMI (Caroteno-chlorophyll a-c-binding protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9D0R3_SYMMI)

HSP 1 Score: 115 bits (289), Expect = 5.290e-28
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 1
Query:   16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARRG 291
            +F+HE WV LQHANVLLNPFCQRLDR YG+++L++  +WVIAGVL  YW+RE+ SM L + + S  T   + VSS YHL K+  I  DA+RG
Sbjct:  334 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSMLRKGQHWVIAGVLVMYWSREVISMLLCLAFTSPRTQLAILVSSGYHLVKMQSICCDAQRG 425          
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A812PPS0_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PPS0_SYMMI)

HSP 1 Score: 109 bits (272), Expect = 8.100e-27
Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 1
Query:   16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288
            + +HE WV LQH NVLLNPFCQRLDR YGI++L++  +WVIA VL  YWARE+ SM L +PY S  +   V VS+ YH  K+  I +DA R
Sbjct:   46 LLLHEAWVTLQHGNVLLNPFCQRLDRKYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYISVYSQIAVFVSAIYHTVKMFNICLDAHR 136          
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A812Z067_9DINO (Hypothetical protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812Z067_9DINO)

HSP 1 Score: 111 bits (277), Expect = 1.760e-26
Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 1
Query:   16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288
            +F+HE WV LQHANVLLNPFCQRLDR YG+++L++  +WVIAGVL  YW+RE+ SM L + + S  T   + VSS YH+ K+  I  DA+R
Sbjct:  336 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSMLRKGEHWVIAGVLVMYWSREVISMLLCLAFTSRRTQLAILVSSGYHVVKMHSICCDAQR 426          
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A812V2L4_9DINO (CER3 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V2L4_9DINO)

HSP 1 Score: 110 bits (275), Expect = 4.130e-26
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 1
Query:   16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288
            +F+HE WV LQHANVLLNPFCQRLDR YG+++L++  +WVIAGVL  YW+RE+ SM L + + S  T   +  SS YHL K+  I  DA+R
Sbjct:  330 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSMLRKGQHWVIAGVLVMYWSREVVSMLLCLAFTSPRTQLAILASSGYHLVKMHSICWDAQR 420          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LAY7_ECTSI5.590e-4166.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPB7_9PHAE9.350e-4166.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A836C6P6_9STRA3.040e-3863.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4KNY6_GUITH5.370e-3362.64Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
L1J6G4_GUITC8.290e-2961.45Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A812Q1W1_9DINO2.250e-2857.61Hypothetical protein n=1 Tax=Symbiodinium necroapp... [more]
A0A1Q9D0R3_SYMMI5.290e-2857.61Caroteno-chlorophyll a-c-binding protein n=1 Tax=S... [more]
A0A812PPS0_SYMMI8.100e-2756.04Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A812Z067_9DINO1.760e-2656.04Hypothetical protein n=2 Tax=unclassified Symbiodi... [more]
A0A812V2L4_9DINO4.130e-2656.04CER3 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10129contigC-tenellus_contig10129:4072..5031 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LAY7
PFAMsFMO-like,Pkinase
Model size294
Max annot lvl2759|Eukaryota
KEGG rclassRC02233
KEGG koko:K00485,ko:K14003
KEGG ReactionR08266
KEGG Pathwayko00982,ko01120,ko04141,map00982,map01120,map04141
Hectar predicted targeting categorysignal peptide
Exons2
Evalue9.17e-42
EggNOG OGsCOG2072@1|root,KOG1399@2759|Eukaryota
EC1.14.13.8
DescriptionN,N-dimethylaniline monooxygenase activity
Cds size294
COG categoryP
BRITEko00000,ko00001,ko01000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789116.5596097-CDS-C-tenellus_contig10129:4071..41821680789116.5596097-CDS-C-tenellus_contig10129:4071..4182Choristocarpus tenellus KU2346CDSC-tenellus_contig10129 4072..4182 +
1680789116.571571-CDS-C-tenellus_contig10129:4848..50311680789116.571571-CDS-C-tenellus_contig10129:4848..5031Choristocarpus tenellus KU2346CDSC-tenellus_contig10129 4849..5031 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10129.2.1prot_C-tenellus_contig10129.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10129 4072..5031 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10129.2.1

>prot_C-tenellus_contig10129.2.1 ID=prot_C-tenellus_contig10129.2.1|Name=mRNA_C-tenellus_contig10129.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=98bp
WLIVGIFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVL
SAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARRG*
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mRNA from alignment at C-tenellus_contig10129:4072..5031+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10129.2.1 ID=mRNA_C-tenellus_contig10129.2.1|Name=mRNA_C-tenellus_contig10129.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=960bp|location=Sequence derived from alignment at C-tenellus_contig10129:4072..5031+ (Choristocarpus tenellus KU2346)
TGGCTGATCGTGGGCATCTTCATCCACGAACTGTGGGTGTGCCTGCAGCA TGCCAACGTCCTCCTGAACCCATTTTGCCAAAGGCTAGATAGAAACTATG GGATAGCACTGGTGAGTCGAGTCCTCTGTTTATGCCATCATAAATCAGTA AGTCGGGCGAGAATATGACATCTGCACCTGTCTCACCTGTCGCCACGACC CCTTACATCGAAGTGATCTGGACACTTTGTGGCCAAATAGGTCAACCCCA AATTGTTGTGGTTATTGATGCCACCTGGACACCTTGCAGACCCTCACCTT GAGGGTCCCATAAGGACCAACTACCAAGGCCAATTCCCATGTTCTACAAT AGTTACACTTTTTCCAAGATGCTAACTTCGTAGGTACTTCAATATTTATC GAAGCACCTATGAAATTAGGAAACCATAAAGCCTGCCATCATACAACGTA ATCACCATGTAGGATACATCTGAATGCTAGGCACAAGTTATTAAAAAAAC TCCTTCTGGGAGGGGGGTGACCTCCCCGTACACTAGCAACTTAAACGCTC AAGAACGTGCACACGCCTCCATAGTTCTCTGACTGATCAACCTAGCCAGC AAGATACATACCTCCAGACAGGTCGGATACGAAAACGCCCAATTTTCCAT ATGTGCTCAGGTTGGGAAGTGAACTCTCATATTCAATATCTTGAGGTATT TCATATGATGGCATGAAGTACTGTCCTCCCCCCCCTCCCCCCGGTTCCTT CCAACACTACTTCCTGCAACCCTTCAGCTCAAGCGGCGCATGTATTGGGT CATTGCTGGCGTGTTGTCGGCATACTGGGCAAGAGAGATCTTTTCCATGT GGCTGTCGATGCCGTACGCCTCCTCGGTGACGGCAAGGATGGTGACGGTT TCATCATTTTACCACTTGGGAAAGATACTGTTGATATCTGTGGACGCTCG TAGGGGGTGA
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Coding sequence (CDS) from alignment at C-tenellus_contig10129:4072..5031+

>mRNA_C-tenellus_contig10129.2.1 ID=mRNA_C-tenellus_contig10129.2.1|Name=mRNA_C-tenellus_contig10129.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=294bp|location=Sequence derived from alignment at C-tenellus_contig10129:4072..5031+ (Choristocarpus tenellus KU2346)
TGGCTGATCGTGGGCATCTTCATCCACGAACTGTGGGTGTGCCTGCAGCA
TGCCAACGTCCTCCTGAACCCATTTTGCCAAAGGCTAGATAGAAACTATG
GGATAGCACTGCTCAAGCGGCGCATGTATTGGGTCATTGCTGGCGTGTTG
TCGGCATACTGGGCAAGAGAGATCTTTTCCATGTGGCTGTCGATGCCGTA
CGCCTCCTCGGTGACGGCAAGGATGGTGACGGTTTCATCATTTTACCACT
TGGGAAAGATACTGTTGATATCTGTGGACGCTCGTAGGGGGTGA
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