mRNA_C-tenellus_contig10129.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: D8LAY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY7_ECTSI) HSP 1 Score: 148 bits (374), Expect = 5.590e-41 Identity = 64/96 (66.67%), Postives = 83/96 (86.46%), Query Frame = 1 Query: 1 WLIVGIFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288 WL+V F HE+W+ LQHAN+LLNP CQRLDR+YGI LL+RR+YWVIAGVL+AYW+RE+ SM ++ PYAS +T +MV +SS YH+GKI+LIS+DA+R Sbjct: 163 WLVVATFAHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQR 258
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A6H5JPB7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB7_9PHAE) HSP 1 Score: 148 bits (373), Expect = 9.350e-41 Identity = 64/96 (66.67%), Postives = 82/96 (85.42%), Query Frame = 1 Query: 1 WLIVGIFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288 WL+V F+HE+W+ LQHAN+LLNP CQRLDR+YG+ LL+RR+YWVIAGVLSAYW+RE+ SM ++ PYAS +T +MV SS YH+GKI+LIS DA+R Sbjct: 163 WLVVATFVHEVWLLLQHANILLNPLCQRLDRSYGVGLLRRRLYWVIAGVLSAYWSREVLSMLIASPYASPLTLKMVATSSLYHVGKIILISRDAQR 258
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A836C6P6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6P6_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.040e-38 Identity = 61/96 (63.54%), Postives = 77/96 (80.21%), Query Frame = 1 Query: 4 LIVGIFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARRG 291 L+ + +HE+WV LQH NVLLNP CQRLDR YGI+LLK+R YWVIAGVL AYW REI SM ++PY + +T+ M+ VS YHLGKI+L+S+DA+RG Sbjct: 40 LVALLLVHEVWVMLQHLNVLLNPLCQRLDRGYGISLLKKRQYWVIAGVLGAYWLREILSMLAALPYTAPLTSNMIAVSCVYHLGKIILVSIDAQRG 135
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A7S4KNY6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KNY6_GUITH) HSP 1 Score: 127 bits (320), Expect = 5.370e-33 Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 1 Query: 16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288 +F HE+W+ +QHANVLLNP+ QRLDR YGIALL++R YWVIAGVLSAYWARE+ SM L Y S T M+ +S YH+ KI L+S+DA R Sbjct: 107 LFAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRFYWVIAGVLSAYWAREVLSMMLCYSYVSDATKTMIMMSCIYHIAKICLVSLDAAR 197
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: L1J6G4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6G4_GUITC) HSP 1 Score: 118 bits (295), Expect = 8.290e-29 Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 1 Query: 16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKIL 264 +F HE+W+ +QHANVLLNP+ QRLDR YGIALL++R YWVIAGVLSAYWARE+ SM L Y S T M+ +S YH+ K++ Sbjct: 99 LFAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRFYWVIAGVLSAYWAREVLSMMLCYSYVSDATKTMIMMSCIYHIAKVI 181
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A812Q1W1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812Q1W1_9DINO) HSP 1 Score: 115 bits (289), Expect = 2.250e-28 Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARRG 291 +F+HE WV LQHANVLLNPFCQRLDR YG+++L++ +WVIAGVL YW+RE+ SM L + + S T + VSS YHL K+ I DA+RG Sbjct: 334 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSMLRKGQHWVIAGVLVMYWSREVISMLLCLAFTSPRTQLAILVSSGYHLVKMQSICCDAQRG 425
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A1Q9D0R3_SYMMI (Caroteno-chlorophyll a-c-binding protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9D0R3_SYMMI) HSP 1 Score: 115 bits (289), Expect = 5.290e-28 Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARRG 291 +F+HE WV LQHANVLLNPFCQRLDR YG+++L++ +WVIAGVL YW+RE+ SM L + + S T + VSS YHL K+ I DA+RG Sbjct: 334 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSMLRKGQHWVIAGVLVMYWSREVISMLLCLAFTSPRTQLAILVSSGYHLVKMQSICCDAQRG 425
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A812PPS0_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PPS0_SYMMI) HSP 1 Score: 109 bits (272), Expect = 8.100e-27 Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288 + +HE WV LQH NVLLNPFCQRLDR YGI++L++ +WVIA VL YWARE+ SM L +PY S + V VS+ YH K+ I +DA R Sbjct: 46 LLLHEAWVTLQHGNVLLNPFCQRLDRKYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYISVYSQIAVFVSAIYHTVKMFNICLDAHR 136
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A812Z067_9DINO (Hypothetical protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812Z067_9DINO) HSP 1 Score: 111 bits (277), Expect = 1.760e-26 Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 1 Query: 16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288 +F+HE WV LQHANVLLNPFCQRLDR YG+++L++ +WVIAGVL YW+RE+ SM L + + S T + VSS YH+ K+ I DA+R Sbjct: 336 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSMLRKGEHWVIAGVLVMYWSREVISMLLCLAFTSRRTQLAILVSSGYHVVKMHSICCDAQR 426
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Match: A0A812V2L4_9DINO (CER3 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V2L4_9DINO) HSP 1 Score: 110 bits (275), Expect = 4.130e-26 Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 16 IFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLSAYWAREIFSMWLSMPYASSVTARMVTVSSFYHLGKILLISVDARR 288 +F+HE WV LQHANVLLNPFCQRLDR YG+++L++ +WVIAGVL YW+RE+ SM L + + S T + SS YHL K+ I DA+R Sbjct: 330 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSMLRKGQHWVIAGVLVMYWSREVVSMLLCLAFTSPRTQLAILASSGYHLVKMHSICWDAQR 420 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10129.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10129.2.1 >prot_C-tenellus_contig10129.2.1 ID=prot_C-tenellus_contig10129.2.1|Name=mRNA_C-tenellus_contig10129.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=98bp WLIVGIFIHELWVCLQHANVLLNPFCQRLDRNYGIALLKRRMYWVIAGVLback to top mRNA from alignment at C-tenellus_contig10129:4072..5031+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10129.2.1 ID=mRNA_C-tenellus_contig10129.2.1|Name=mRNA_C-tenellus_contig10129.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=960bp|location=Sequence derived from alignment at C-tenellus_contig10129:4072..5031+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10129:4072..5031+ >mRNA_C-tenellus_contig10129.2.1 ID=mRNA_C-tenellus_contig10129.2.1|Name=mRNA_C-tenellus_contig10129.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=294bp|location=Sequence derived from alignment at C-tenellus_contig10129:4072..5031+ (Choristocarpus tenellus KU2346)back to top |