mRNA_C-tenellus_contig10002.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI) HSP 1 Score: 214 bits (545), Expect = 4.010e-62 Identity = 103/117 (88.03%), Postives = 108/117 (92.31%), Query Frame = 1 Query: 1 VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLNAEVASGTITTVDEGVTWLSYTYLHVRMRKNPLVYGVPQSDREGDPQLKERRRQLITQAAETLDDHK 351 VFGRAGRPQYD SGEAIMITTHKSLDKYLALLAKQTPIES FIKALPDHLNAEV SGT+TTV+EG+TWLSYTYLHVRMR+NP+ YGVP SDRE DP L ERRRQLI QAAETLDDHK Sbjct: 980 VFGRAGRPQYDTSGEAIMITTHKSLDKYLALLAKQTPIESGFIKALPDHLNAEVTSGTVTTVEEGITWLSYTYLHVRMRRNPMAYGVPLSDREADPMLLERRRQLIVQAAETLDDHK 1096
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Match: A0A835Z6M6_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M6_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.910e-47 Identity = 81/117 (69.23%), Postives = 98/117 (83.76%), Query Frame = 1 Query: 1 VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLNAEVASGTITTVDEGVTWLSYTYLHVRMRKNPLVYGVPQSDREGDPQLKERRRQLITQAAETLDDHK 351 +FGRAGRPQYD SGEAI+ITTHKSLD+YLALLA+ TPIES FIKAL DHLNAEVA+GT+T V E V WLSYTYL+VRM+KNP+ YG+ +D E DP+ ++RR++LI AA LDD + Sbjct: 218 IFGRAGRPQYDTSGEAILITTHKSLDRYLALLARATPIESNFIKALEDHLNAEVAAGTVTNVREAVMWLSYTYLYVRMQKNPMAYGIKLADAEADPRAEQRRKKLILDAAAVLDDRR 334
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Match: W7TU71_9STRA (Activating signal cointegrator 1 complex subunit 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU71_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.770e-45 Identity = 77/117 (65.81%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 1 VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLNAEVASGTITTVDEGVTWLSYTYLHVRMRKNPLVYGVPQSDREGDPQLKERRRQLITQAAETLDDHK 351 +FGRAGRPQYD SGEA+MITTHK+L +YLALL +Q PIESAFIK LPDHLNAE+ SGT+T+V EG WL+YTYL++RM KNP+ YGV + DP L +R QLITQAA LD ++ Sbjct: 898 IFGRAGRPQYDTSGEAVMITTHKALPRYLALLTEQMPIESAFIKQLPDHLNAEIVSGTVTSVKEGAAWLAYTYLYIRMLKNPMAYGVTYEEAAQDPMLDAKRLQLITQAARILDQNR 1014
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Match: A0A7S2BBN7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BBN7_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.880e-42 Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 1 Query: 1 VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLNAEVASGTITTVDEGVTWLSYTYLHVRMRKNPLVYGVPQSDREGDPQLKERRRQLITQAAETLDDHK 351 +FGRAGRPQ+D SGEA MIT+H +L +YL LL +Q IES F+K L DHLNAEV+SGT+T +DEGV WLSYTYL++RM KNPL YG+ RE DPQL+ R I AA+ LD+ + Sbjct: 7 IFGRAGRPQFDTSGEATMITSHTALPRYLQLLTRQAAIESNFLKQLEDHLNAEVSSGTVTNIDEGVAWLSYTYLYIRMLKNPLCYGLNFEAREMDPQLEAARYDKIKAAAKRLDEQR 123
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Match: A0A7S1Y115_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y115_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.400e-42 Identity = 70/114 (61.40%), Postives = 91/114 (79.82%), Query Frame = 1 Query: 1 VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLNAEVASGTITTVDEGVTWLSYTYLHVRMRKNPLVYGVPQSDREGDPQLKERRRQLITQAAETLD 342 +FGRAGRPQYD GE ++IT+H ++ YL+LLA Q PIES+FIK LPDHLNAE+ASGT+T V+E + WL+YTYL+VRM+KNPL YGV Q + DP L ++RR+L+ + A TLD Sbjct: 579 IFGRAGRPQYDTFGEVVLITSHGAMPSYLSLLAHQAPIESSFIKQLPDHLNAEIASGTVTNVEEAIRWLTYTYLYVRMKKNPLAYGVTQEEHATDPDLVDKRRELVLRFARTLD 692
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Match: A0A6G0XUV3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XUV3_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.430e-40 Identity = 69/115 (60.00%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 1 VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLNAEVASGTITTVDEGVTWLSYTYLHVRMRKNPLVYGVPQSDREGDPQLKERRRQLITQAAETLDD 345 +FGRAGRPQYD SGEA ++TTH LD YL L+ Q PIESA IK LPDHLNAE+ SGT+ + E +TWLSYTYL +RM K+P+VYG+ +R DP L E+R L+ QA +TL+D Sbjct: 690 IFGRAGRPQYDTSGEASIVTTHDQLDHYLRALSNQAPIESALIKTLPDHLNAEIVSGTVANMSEALTWLSYTYLFIRMMKSPMVYGMSYDERANDPMLVEKRTSLLKQAIQTLED 804
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Match: K3WN69_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WN69_GLOUD) HSP 1 Score: 152 bits (384), Expect = 1.960e-40 Identity = 71/113 (62.83%), Postives = 87/113 (76.99%), Query Frame = 1 Query: 1 VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLNAEVASGTITTVDEGVTWLSYTYLHVRMRKNPLVYGVPQSDREGDPQLKERRRQLITQAAETL 339 +FGRAGRPQYD SG+A+++TTH L YL LL P+ESA IKALPDHLNAE+ SGT++ +DE WLSYTYL+VRM+KNPL YG+ D +GDP L ERR+QL+ AAE L Sbjct: 822 IFGRAGRPQYDTSGDAVLMTTHDQLPHYLRLLTTGIPMESALIKALPDHLNAEIVSGTVSNLDEACEWLSYTYLYVRMKKNPLAYGMKIEDVQGDPLLIERRKQLLMDAAEKL 934
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Match: A0A5D6Y5V5_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5V5_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.970e-40 Identity = 70/113 (61.95%), Postives = 85/113 (75.22%), Query Frame = 1 Query: 1 VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLNAEVASGTITTVDEGVTWLSYTYLHVRMRKNPLVYGVPQSDREGDPQLKERRRQLITQAAETL 339 +FGRAGRPQYD G+A+++TTH L YL LL P+ESA IKALPDHLNAE+ SGT++ +DE WLSYTYL+VRMRKNPL YG+ D + DPQL RR+QL+ AAE L Sbjct: 806 IFGRAGRPQYDTRGDAVLVTTHDQLPHYLRLLTTGIPMESALIKALPDHLNAEIVSGTVSNLDEACAWLSYTYLYVRMRKNPLAYGIKLEDVQADPQLLARRKQLLLDAAEKL 918
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Match: A0A482UC11_9ARCH (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UC11_9ARCH) HSP 1 Score: 147 bits (370), Expect = 2.620e-40 Identity = 68/114 (59.65%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 1 VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLNAEVASGTITTVDEGVTWLSYTYLHVRMRKNPLVYGVPQSDREGDPQLKERRRQLITQAAETLD 342 +FGRAGRPQ+D SGE I++T+H L YL +L + PIES+FIKALPDHLNAE+ SGT+T V E V+WL+YTYL VRM +NPLVYG +D E DP L+ + +L+T AA+ LD Sbjct: 53 IFGRAGRPQFDTSGEGIILTSHDKLQHYLQMLTQSLPIESSFIKALPDHLNAEIVSGTVTNVREAVSWLAYTYLFVRMLRNPLVYGFTWADLESDPMLRGKCVELVTSAAKRLD 166
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Match: A0A3L6UNX1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UNX1_9STRA) HSP 1 Score: 151 bits (382), Expect = 3.360e-40 Identity = 69/115 (60.00%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 1 VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLNAEVASGTITTVDEGVTWLSYTYLHVRMRKNPLVYGVPQSDREGDPQLKERRRQLITQAAETLDD 345 +FGRAGRPQYD SGEA ++TTH LD YL LA Q PIESA IK LPDHLNAE+ SGT+ + E + WLSYTYL VRM KNP+ YG+ +R DP L +R +L+ QA +TL+D Sbjct: 568 IFGRAGRPQYDTSGEATIVTTHDQLDHYLRALANQAPIESALIKTLPDHLNAEIVSGTVANLPEALAWLSYTYLFVRMMKNPMAYGMSYDERANDPMLVNKRTELLKQAIQTLED 682 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10002.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10002.1.1 >prot_C-tenellus_contig10002.1.1 ID=prot_C-tenellus_contig10002.1.1|Name=mRNA_C-tenellus_contig10002.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=119bp VFGRAGRPQYDNSGEAIMITTHKSLDKYLALLAKQTPIESAFIKALPDHLback to top mRNA from alignment at C-tenellus_contig10002:1314..4662- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10002.1.1 ID=mRNA_C-tenellus_contig10002.1.1|Name=mRNA_C-tenellus_contig10002.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3349bp|location=Sequence derived from alignment at C-tenellus_contig10002:1314..4662- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10002:1314..4662- >mRNA_C-tenellus_contig10002.1.1 ID=mRNA_C-tenellus_contig10002.1.1|Name=mRNA_C-tenellus_contig10002.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=357bp|location=Sequence derived from alignment at C-tenellus_contig10002:1314..4662- (Choristocarpus tenellus KU2346)back to top |