mRNA_C-tenellus_contig100.7.10 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Match: D8LEI5_ECTSI (EamA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEI5_ECTSI) HSP 1 Score: 149 bits (375), Expect = 1.030e-34 Identity = 97/316 (30.70%), Postives = 155/316 (49.05%), Query Frame = 2 Query: 464 VVLLLAWTSFSGWTFVAELALQEGINSLALTLERQLVAVPAMLWFAHWNKGDLLPRGADTPMIIILGALGFGNIVGAIEALKYVDAGAVALGQLCVPVATVCFCWLFGAEQMSKLKVASILVCVAGAMLVSVFYNEAGGYISVAGTTGSRLW--------------------------WVGVLLLTVHVVCAAGLAVGLSDIVRRYHPASVTAWYYIVGTVFTLFACIFSNTQLRDFGLKGRAEPWIAIVYGALVVSFFNWNAISWAIARLPASVVMASGTSRPLLTALLALWIHNDKLGVVEWVGSVMIGVGLLL 1333 +VL FSGW +A++AL +G+N++AL + R++ A M A G + A +G GN+VG I AL+ ++ A + Q +PV + ++ G EQMS+LK + + VAGA+ V +F + + +VAG+T + W+G L+L A L V ++ Y PA++TAWYY VG+ TL C F + DF L G+ EPWIA+VY +V + + +NA SW + + + T +P+ T +L++ N + E G ++I VGLL+ Sbjct: 27 LVLFSVQVCFSGWHVLAKVALNDGVNAVALAMAREICATILMFIIARRVDGAVSLDPAHAIRFFWMGFASCGNVVGCILALRTLNPMAFGVMQPSIPVLAMLLSYMLGLEQMSQLKCLGVFISVAGAVWVELFASTSDW--AVAGSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWLGSLILLWQCGSMAALMVLQKPMLAVYPPATLTAWYYAVGSALTLVVCGFFGVRPVDFLLTGQWEPWIALVYAVVVGTVYTYNAYSWVLNIVSTTTATTYLTLQPVTTVILSVVFLNTAVRGHEVCGGIVIAVGLLV 340
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Match: A0A1Y1HRB9_KLENI (WAT1-related protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HRB9_KLENI) HSP 1 Score: 84.3 bits (207), Expect = 1.770e-13 Identity = 83/330 (25.15%), Postives = 143/330 (43.33%), Query Frame = 2 Query: 464 VVLLLAWTSFSGWTFVAELALQEGINSLALTLERQLVAVPAMLWFAHWNKGDLLPRGADTPM-------IIILGALGF-GNIVGAIEALKYVDAGAVALGQLCVPVATVCFCWLFGAEQM------SKLKVASILVCVAGAMLVSVFY-------NEAGGY-------------ISVAGTT----GSRLWWVGVLLLTVHVVCAAGLAVGLSDIVRRYH-PASVTAWYYIVGTVFTLFACIFSNTQLRDFGLKGRAEPWIAIVYGALVVSFFNWNAISWAIARLPASVVMASGTSRPLLTALLALWIHNDKLGVVEWVGSVMIGVGLLLL 1336 + L+ ++ G+ V ++AL+ G+N R ++A+ + A + + RG PM I+LG G GN + + L Y A Q +PV T + GAE + + KVA +L CV+GA+L++++ +EA G +S G + G W +GV+ L + + + S +++RY P SVTA Y G + L + + L G A++YG ++ S N+ +SWA + ++V +PL +ALL+ N + + +G V+I GL L+ Sbjct: 41 IALVFVQVAYGGYHVVVKVALKGGVNQFVFCALRDIIALAILAPVAFFGE-----RGRRPPMTRGLLASFILLGMTGILGNQLLFMFGLNYTSPMYAAAMQPSIPVLTFLLAIVSGAETVFLRRKDGQAKVAGVLACVSGALLMAIYRGAPVFGTDEANGLQAAGRSALVVSEDVSYVGRSLASYGMSWWHLGVVCLIGNCISMSVYIAVQSPVLQRYPAPLSVTALAYFFGALLMLLCALLFVDTRAAWVLTGSQIG--AVLYGGIIASAVNYGLMSWANKCVGPAIVAMYLPLQPLASALLSRLFLNSTIYLGSILGGVLILSGLFLV 363
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Match: A0A7S4SSY0_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SSY0_9DINO) HSP 1 Score: 75.5 bits (184), Expect = 1.030e-10 Identity = 65/305 (21.31%), Postives = 131/305 (42.95%), Query Frame = 2 Query: 491 FSGWTFVAELALQEGINSLALTLERQL-------VAVPAMLWFAHWNKGDLLPRGADTPMIIILGALGFGNIVGAIEALKYVDAGAVALGQLCVPVATVCFCWLFGAEQMSKLKVASILVCVAGAMLVSVFYNEAGGYISVAGTTGSRLWWVGVLLLTVHVVCAAGLAVGLSDIVRR-YHPASVTAWYYIVGTVFT----LFACIFSNTQLRDFGLKGRAEPW-IAIVYGALVVSFFNWNAISWAIARLPASVVMASGTSRPLLTALLALWIHNDKLGVVEWVGSVMIGVGLLLLHIAHHQEEAE 1366 FSG++ + AL ++++A + R++ A+ A++ W P+ ++ G G + + ALK G V+L Q P+ W + EQ+ + ++ +++CV GA Y V+GT G +G + + V V +++ Y P V Y+V + T + S +L + G + + +A++Y L+ + +N+ ++W R A+ V + + L T + LGV++ +G+++ G+GL++ +A + AE Sbjct: 47 FSGYSLLVHHALSGSVSAVAFAVYREIGASCCFAAAIMALVPKEDW------PQRRHARFFVLAGGSMGGQLTLMLLALKATSPGVVSLMQPISPIFVALLAWCYYREQLERKQICGMILCVGGA------------YFLVSGTGGLGTLDMGASVAILQSVVGGNYLVMQRPLLQAGYTPLVVAGGSYLVALMLTGVIAAVTYVASMVELSEVQWWGDSSLYPVAVLYAVLLTTVYNYVVMAWVTKRTGATTVGLANLLQGLFTNAAEFLFFSKSLGVLQVLGALLAGLGLVVFFLATPRPAAE 333
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Match: A0A067GDS2_CITSI (WAT1-related protein n=4 Tax=Citrus TaxID=2706 RepID=A0A067GDS2_CITSI) HSP 1 Score: 68.6 bits (166), Expect = 1.720e-8 Identity = 73/297 (24.58%), Postives = 127/297 (42.76%), Query Frame = 2 Query: 524 LQEGINSLALTLERQLVAVPAMLWFAHWNKGDLLPRGADTPMIIILGALGFGNIVGA-------IEALKYVDAGAVALGQLCVPVATVCFCWLFGAEQMS------KLKVASILVCVAGAMLVSVF---------YNEAGGYISVAG---TTGSRLWWVGVLLLTVHVVCAAGLAVGLSDIVRRYH-PASVTAWYYIVGTVFTLFACIFSNTQLRDFGLKGRAEPWIAIVYGALVVSFFNWNAISWAIARLPASVVMASGTSRPLLTALLALWIHNDKLGVVEWVGSVMIGVGLLLL 1336 L+EG+N L R LVA + ++ + + P+ + IL L F IVG + ++Y A VPV T FG E + K KV LVC+ GAML++++ Y++A I+V T + W G + LTV + A S I +RY S TA + G + C+ +N + KG+ E I+++Y +V S + ++W + + A ++ A+ + + +++L + +GS+ + +GL +L Sbjct: 31 LEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLT----LRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEI-ISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL 322
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Match: A0A3N7EKA8_POPTR (WAT1-related protein n=4 Tax=Populus TaxID=3689 RepID=A0A3N7EKA8_POPTR) HSP 1 Score: 68.6 bits (166), Expect = 1.910e-8 Identity = 87/343 (25.36%), Postives = 144/343 (41.98%), Query Frame = 2 Query: 488 SFSGWTFVAELALQEGINSLALTLERQLVAVPAMLWFAHWNKGDLLPRGADTPMII-ILGALGFGNIVGA-------IEALKYVDAGAVALGQLCVPVATVCFCWLFGAEQM------SKLKVASILVCVAGAMLVSV------FYNEAGGYISVAGTTGSRL--------WWVGVLLLTVHVVCAAGLAVGLSDIVRRYH-PASVTAWYYIVGTVFTLFACIFSNTQLRDFGLKGRAEPWIAIVYGALVVSFFNWNAISWAIARLPASVVMASGTSRPLLTALLALWIHNDKLGVVEWVGSVMIGVGLLLLHIAHHQEEAEEDLTVEREQYLQGERKPLLEE 1429 +FS + + L EGIN L L R ++ + ++ + RG+ P+ IL L IVGA + ++Y A VPV T F E + K KV LVCVAGAML+++ F N G ++ A +L W G + L V + +G V S I RRY S TA G + + C+ + L + LKG+ E I ++Y ++ S + +SW + + A ++ A+L + I +++L + +GS+ + +GL +L ++E V +E E+ P L++ Sbjct: 22 AFSIVNILLKKVLDEGINRLVLITYRLSISAIFLGPIGYFRE-----RGSRPPLTFRILCYLFLSAIVGASLTQYFFLIGIQYTSATFSCAFINMVPVVTFIMALPFKMETVHIKSNSGKAKVLGTLVCVAGAMLLTLIRGAPLFNNSPGQAVTRAMDHSLKLSQTKRAGRWTFGCITLLVGTLLWSGWFVLQSHIGRRYPCQCSSTAIMSFFGAIQSAILCLSTERSLSIWVLKGKIEI-ITVLYAGIIGSGLCYVGMSWCVKKRGPVFTAAFSPLVQIMAAMLDVPILHEELYLGSLLGSIFVIIGLYILLWGKNKEMQNHATRVAQEAEEIKEQDPPLQD 358
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Match: A0A2R6XLP6_MARPO (WAT1-related protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XLP6_MARPO) HSP 1 Score: 68.6 bits (166), Expect = 2.280e-8 Identity = 87/365 (23.84%), Postives = 150/365 (41.10%), Query Frame = 2 Query: 428 CTGWVWKIIG-TPVVLLLAWTSFSGWTFVAELALQEGINSLALTLERQLVAVPAMLWFAH-WNKGDLLPRGADTPMIIILGALGFGNIVGA----IEALKYVDAGAVALGQLCVPVATVCFCWLFGAEQM------SKLKVASILVCVAGAMLVSVFYNEA--GGYISVAGTT----------GSRL-------WWVGVLLLTVHVVCAAGLAVGLSDIVRRYH-PASVTAWYYIVGTVFTLFACIFSNTQLRDFGLKGRAEPWIAIVYGALVVSFFNWNAISWAIARLPASVVMASGTSRPLLTALLALWIHNDKLGVVEWVGSVMIGVGLLLL---HIAHHQEEAEEDLTVEREQYLQGERKP 1417 C W G L++ F+G ++ +AL G++ + R +A+ M FA+ K D P L LG IVG+ + L Y A A Q VPV T + G E++ + KV +VCVAGA+L+SV+ A G+ G GS L W +G +LL ++ + A + + I++ P ++TA+ Y G++ ++ L A+ I++ Y ++ S N++ SWAI + +V + ++ A L++ + D L + VG +GL L+ + H + +A E + + L+ P Sbjct: 24 CVDWFCNGTGKVHAALMMMQLGFAGHQILSRVALTSGLSQFVYAIYRNGLALIIMGPFAYVLEKKDRPPMTLKLMYRFFL--LGLTGIVGSQQLFLAGLIYTSATFAATMQNAVPVITFLMAMMLGLEKVRIGRLDGQAKVLGTVVCVAGAILMSVYKGPAVYHGWAKEDGNEDLHKLVGHFLGSHLVRFGISQWQLGGILLLINCISWAAYLIMQAPILKVCPTPLTITAFTYFFGSLQVGVLMFIVTGGKINWSLSWGAQA-ISVAYAGVISSGINFSLQSWAIQKGGPLLVSLYTPVQTIIVAFLSVLLLGDSLYLGSLVGGSGAVLGLYLVTWGQVEHRKRDALEIAAETKNEDLEASAHP 385
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Match: A0A3M6V2F1_POCDA (EamA domain-containing protein n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6V2F1_POCDA) HSP 1 Score: 66.2 bits (160), Expect = 4.650e-8 Identity = 59/253 (23.32%), Postives = 110/253 (43.48%), Query Frame = 2 Query: 674 FGNIVGAIEALKYVDAGAVALGQLCVPVATVCFCWLFGAEQMSKL-------KVASILVCVAGAMLVSVFYNEAGGYISVAGTTGSRLWWVGVLLL-------TVHVVCAAGLAVGLSDIVRRYHPASVTAWYYIVGTVFTLFACIFSNTQLRDFGLKGRAEPWIAIVYGALVVSFFNWNAISWAIARLPASVVMASGTSRPLLTALLALWIHNDKLGVVEWVGSVMIGVGLLLLHIAHHQEEA-----EEDL 1375 FGN + + + Y +A ++ Q +PV T + E K IL+ GA++++V ++ + +VG + L V+++ D + P +VTAW Y+ G +F A ++ + F + E + I+Y + S + ISW ++ AS+V A+ + L A+L+ ++ + L +E+VG V+I +GL+ + ++ EE EEDL Sbjct: 2 FGNQLLYLLGIYYTNANIASIFQPAIPVWTALLAIIVRIEPFPDFRTLRGWAKSLGILLAAVGAIVMTVEKKTGQASDHSGSSSSGSVNFVGYIFLLGNTLSMAVYILLQKKFIFDKEDSCWKTKPVTVTAWSYLFGAMFMALASLYYVNKPEKFTYFPQEEVY-PILYAIFIASGLCYLLISWCNMQISASLVTATWPLQVLFCAILSYFVLGEVLKTLEYVGGVLIVIGLMAVVWSNFSEEEMKSEQEEDL 253
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Match: A0A0G3ERL2_9BURK (Multidrug DMT transporter permease n=3 Tax=Pandoraea TaxID=93217 RepID=A0A0G3ERL2_9BURK) HSP 1 Score: 64.7 bits (156), Expect = 2.020e-7 Identity = 72/301 (23.92%), Postives = 125/301 (41.53%), Query Frame = 2 Query: 488 SFSGWTFVAELALQEGINSLALTLERQLVAVPAMLWFAHWNKGDLLPRGADTPMIIILGALGF-GNIVGAIEALKYVDAGAVALGQLCVPVATVCFCWLFGAEQMSKLKVASILVCVAGAMLVSVFYNEAGGYISVAGTTGSRLWWVGVLLLTVHVVCAAGLAVGLSDIVRRYHPASVTAWYYIVGTVFTLFACIFSNTQLRDFGLKGRAEPWIAIVYGAL---VVSFFNWNAISWAIARLPASVVMASGTSRPLLTALLALWIHNDKLGVVEWVGSVMIGVGLLLLHIAHHQEEAEEDLT 1378 +F A A +G + L L R +A + WFA W++ LP + ++G +G+ G + EAL++ AG VAL P +F E+++++K+ ++L+C AG L GG V G L ++ ++++V A ++ G+ P + T ++ A + + A W+A+V A+ VV+ + A + RL A+ T P +T LA +KL + G ++I G+L L + Q A E T Sbjct: 26 AFGAMPIFARAAYADGADVFGLLLTRFGLAFVLLGWFA-WSRRIALPPWRRVAALALMGGIGYVGQSICYFEALRFAQAGLVALLLYLYPFFVTVLAAMFLHERLTRVKIGALLLCSAGCAL-----TVGGG---VGQPLGIGLAIGAAMIYSIYIVVGARVSAGVD-------PRATTLVVCGAASLVLSCAALVRSHAGAPPHWPAHAGGWLALVAIAVFSTVVAILTFFA---GMQRLGAARASMLSTLEPGVTVALAAITLGEKLKPGQLAGGLLILAGVLWLSVRDRQSHAPEPPT 307
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Match: A0A3N7FGA6_POPTR (WAT1-related protein n=3 Tax=Populus TaxID=3689 RepID=A0A3N7FGA6_POPTR) HSP 1 Score: 63.9 bits (154), Expect = 5.250e-7 Identity = 80/304 (26.32%), Postives = 129/304 (42.43%), Query Frame = 2 Query: 608 NKGDLLP-RGADTPMII-ILGALGFGNIVGA-------IEALKYVDAGAVALGQLCVPVATVCFCWLFGAEQM------SKLKVASILVCVAGAMLVSV------FYNEAGGYISVAGTTGSRL--------WWVGVLLLTVHVVCAAGLAVGLSDIVRRYH-PASVTAWYYIVGTVFTLFACIFSNTQLRDFGLKGRAEPWIAIVYGALVVSFFNWNAISWAIARLPASVVMASGTSRPLLTALLALWIHNDKLGVVEWVGSVMIGVGLLLLHIAHHQEEAEEDLTVEREQYLQGERKPLLEE 1429 N+ LL RG+ P+ IL L IVGA + ++Y A VPV T F E + K KV LVCVAGAML+++ F N G ++ A +L W G + L V + +G V S I RRY S TA G + + C+ + L + LKG+ E I ++Y ++ S + +SW + + A ++ A+L + I +++L + +GS+ + +GL +L ++E V +E E+ P L++ Sbjct: 38 NQARLLACRGSRPPLTFRILCYLFLSAIVGASLTQYFFLIGIQYTSATFSCAFINMVPVVTFIMALPFKMETVHIKSNSGKAKVLGTLVCVAGAMLLTLIRGAPLFNNSPGQAVTRAMDHSLKLSQTKRAGRWTFGCITLLVGTLLWSGWFVLQSHIGRRYPCQCSSTAIMSFFGAIQSAILCLSTERSLSIWVLKGKIEI-ITVLYAGIIGSGLCYVGMSWCVKKRGPVFTAAFSPLVQIMAAMLDVPILHEELYLGSLLGSIFVIIGLYILLWGKNKEMQNHATRVAQEAEEIKEQDPPLQD 340
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Match: A0A3A9W2Q6_9FLAO (DMT family transporter n=3 Tax=Aquimarina TaxID=290174 RepID=A0A3A9W2Q6_9FLAO) HSP 1 Score: 62.8 bits (151), Expect = 7.690e-7 Identity = 64/295 (21.69%), Postives = 134/295 (45.42%), Query Frame = 2 Query: 464 VVLLLAWTSFSGWTFVAELALQEGINSLALTLERQLVAVPAMLWFAHWNKGDLLPR--GADTPMIIILGALGFGNIVGAIE--ALKYVDAGAVALGQLCVPVATVCFCWLFGAEQMSKLKVASILVCVAGAMLVSVFYNEAGGYISVAGTTGSRLWWVGVLLLTVHVVCAAGLAVGLSDIVRRYHPASVTAWYYIVGTVFTLFA-CIFSNTQLRDFGLKGRAEPWIAIVYGALVVSFFNWNAISWAIARLPASVVMASGTSRPLLTALLALWIHNDKLGVVEWVGSVMIGVGLLL 1333 ++ ++ FS + ++A + + S L L R ++P + A +NK L + D I+ G +G+ + + L+Y+ AG + P + +F +++K ++ +IL+ G ++ F+ E + T + L GV L+ + + A VG ++ ++ T++ I+ ++ + IF + + + L+ + + ++ S+ ISWAIARL AS V G+ P+ T LLA +I + L V++ +G+ ++ G+ + Sbjct: 12 ILAIIGVVLFSAKAVMVKMAYKYQVTSEHLLLFRMSFSLPVYIIIAQFNKPSSLEKIKKKDYLWIVFFGFIGY-YLASYFDFLGLQYIKAGLERIILFVYPTLVLVISRIFLKHKITKQQLVAILITYIGVLIT--FWQE------LQLDTPNLL--SGVSLIFLSALTYAIYLVGSGWLIPKFGVVVFTSYAMIISSLCIISQYLIFDRSDILSYSLEVYVLSVLMAFFSTIIPSYL----ISWAIARLGASNVAIIGSLGPVSTILLAFFILEESLSVLQIIGAGIVIFGIYI 291 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig100.7.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig100.7.10 >prot_C-tenellus_contig100.7.10 ID=prot_C-tenellus_contig100.7.10|Name=mRNA_C-tenellus_contig100.7.10|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=454bp MYENIYHLGFNYSSAKCLVGPCRLDTRSMSTSFFVRTPRPISPHLPTVPSback to top mRNA from alignment at C-tenellus_contig100:8713..17247- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig100.7.10 ID=mRNA_C-tenellus_contig100.7.10|Name=mRNA_C-tenellus_contig100.7.10|organism=Choristocarpus tenellus KU2346|type=mRNA|length=8535bp|location=Sequence derived from alignment at C-tenellus_contig100:8713..17247- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig100:8713..17247- >mRNA_C-tenellus_contig100.7.10 ID=mRNA_C-tenellus_contig100.7.10|Name=mRNA_C-tenellus_contig100.7.10|organism=Choristocarpus tenellus KU2346|type=CDS|length=1362bp|location=Sequence derived from alignment at C-tenellus_contig100:8713..17247- (Choristocarpus tenellus KU2346)back to top |