mRNA_C-tenellus_contig1.10.3 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Match: D8LK57_ECTSI (PWI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK57_ECTSI) HSP 1 Score: 232 bits (592), Expect = 5.530e-74 Identity = 125/170 (73.53%), Postives = 142/170 (83.53%), Query Frame = 1 Query: 1 MSSGFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMKRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKRLQLQLTGFLEKSTSTFMEELWGLLVDAQNSLGGIPSAFLQDKKQEMLKAKASEAGRKEQEVELQKRMTEHQQEMEHAALLAEA 510 MSS FFRGT EQDSR+GD++KKL+++ KFSK+L+QKV NMKKVN DVM+RWIAQRITSLLGFEDDIVVGTC+NYLSEEGKLDPK+LQLQLTGFLEKST FMEELWGLLVDAQ+SLGGIPSAFLQDKKQE+L L++RM EHQQE+E A LA+A Sbjct: 1 MSSNFFRGTTAEQDSRWGDAEKKLLRRTKFSKVLEQKV--NMKKVNMDVMQRWIAQRITSLLGFEDDIVVGTCINYLSEEGKLDPKKLQLQLTGFLEKSTGMFMEELWGLLVDAQSSLGGIPSAFLQDKKQELLXXXXXXXXXX---XXLRRRMVEHQQELERTAALAQA 165
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Match: A0A6H5KM37_9PHAE (PWI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM37_9PHAE) HSP 1 Score: 231 bits (588), Expect = 8.050e-73 Identity = 125/170 (73.53%), Postives = 141/170 (82.94%), Query Frame = 1 Query: 1 MSSGFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMKRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKRLQLQLTGFLEKSTSTFMEELWGLLVDAQNSLGGIPSAFLQDKKQEMLKAKASEAGRKEQEVELQKRMTEHQQEMEHAALLAEA 510 MSS FFRGT EQDSR+GD++KKL+++ KFSK+L+QKV NMKKVN DVM+RWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPK+LQLQLTGFLEKST FMEELWGLLVDAQ+SLGGIPSAFLQDKKQE+L+ +RM EHQQE+E A LA+A Sbjct: 1 MSSNFFRGTTAEQDSRWGDAEKKLLRRTKFSKVLEQKV--NMKKVNMDVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKKLQLQLTGFLEKSTGMFMEELWGLLVDAQSSLGGIPSAFLQDKKQELLQKXXXXXXXX---XXXXRRMVEHQQELERTAALAQA 165
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Match: A0A1X2GZS3_SYNRA (PWI domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2GZS3_SYNRA) HSP 1 Score: 149 bits (375), Expect = 1.680e-42 Identity = 77/140 (55.00%), Postives = 104/140 (74.29%), Query Frame = 1 Query: 10 GFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMKRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKRLQLQLTGFLEKSTSTFMEELWGLLVDAQNSLGGIPSAFLQDKKQEMLKAKASEAGR 429 GFF+GT+ +QDSRF + +KKL+K M F DQKV +MKKVN DVM+ WI+ RIT LLGFED++V+ + L EE K DP+R+Q+ LTGFLEK+T TF+ +LW LL+ AQ S+GG+P FL+ KK+E+ ++K EA R Sbjct: 5 GFFKGTSADQDSRFSNKEKKLLKSMTFPPEFDQKV--DMKKVNLDVMRPWISTRITELLGFEDEVVIDFTIGLLEEE-KPDPRRMQINLTGFLEKNTQTFILDLWKLLLSAQGSIGGVPQEFLEAKKRELQQSKRDEAER 141
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Match: S2J644_MUCC1 (PWI domain-containing protein n=3 Tax=Mucor TaxID=4830 RepID=S2J644_MUCC1) HSP 1 Score: 147 bits (371), Expect = 6.200e-42 Identity = 76/143 (53.15%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 10 GFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMKRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKRLQLQLTGFLEKSTSTFMEELWGLLVDAQNSLGGIPSAFLQDKKQEMLKAKASEAGRKEQ 438 GFF+GT+ +QDSRF + +KKL+K M F DQKV +MKKVN DV+K WI+ RIT LLGFED++V+ + L E+ + DPKR+Q+ LTGFLE T F+ ELW LL+ AQNS+GGIP+ F++ KKQE+ + + E R+ Q Sbjct: 5 GFFKGTSADQDSRFSNKEKKLLKSMSFPPEFDQKV--DMKKVNLDVIKPWISNRITELLGFEDEVVIDYTCSLLEEKDQ-DPKRMQINLTGFLESKTQAFLSELWNLLLSAQNSVGGIPTEFIEQKKQELRRKQTQEDERRNQ 144
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Match: A0A0C9MPB6_9FUNG (PWI domain-containing protein n=1 Tax=Mucor ambiguus TaxID=91626 RepID=A0A0C9MPB6_9FUNG) HSP 1 Score: 147 bits (372), Expect = 4.610e-41 Identity = 76/143 (53.15%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 10 GFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMKRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKRLQLQLTGFLEKSTSTFMEELWGLLVDAQNSLGGIPSAFLQDKKQEMLKAKASEAGRKEQ 438 GFF+GT+ +QDSRF + +KKL+K M F DQKV +MKKVN DV+K WI+ RIT LLGFED++V+ + L E+ + DPKR+Q+ LTGFLE T F+ ELW LL+ AQNS+GGIP+ F++ KKQE+ + + E R+ Q Sbjct: 5 GFFKGTSADQDSRFSNKEKKLLKSMSFPSEFDQKV--DMKKVNLDVIKPWISNRITELLGFEDEVVIDYTCSLLEEKDQ-DPKRMQINLTGFLESKTQAFLSELWNLLLSAQNSVGGIPTEFIEQKKQELRRKQTQEDERRNQ 144
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Match: A0A8H7V7E3_9FUNG (PWI domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7V7E3_9FUNG) HSP 1 Score: 146 bits (368), Expect = 8.150e-41 Identity = 76/141 (53.90%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 10 GFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMKRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKRLQLQLTGFLEKSTSTFMEELWGLLVDAQNSLGGIPSAFLQDKKQEMLKAKASEAGRK 432 GFF+GT+ +QDSRF + +KKL+K M F DQKV +MKKVN DV+K WI+ RIT LLG ED+IV+ + L E+ + DPKR+Q+ LTGFLE +T F+ ELW LL+ AQNS+GGIP+ F++ KK+E+ K K+ E R+ Sbjct: 5 GFFKGTSADQDSRFSNKEKKLLKSMSFPPEYDQKV--DMKKVNLDVIKPWISNRITELLGLEDEIVIDYTCSLLEEKNQ-DPKRMQINLTGFLESNTKKFVTELWNLLLSAQNSVGGIPAIFIEQKKEELRKKKSQEDERR 142
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Match: A0A0L0HPG5_SPIPD (PWI domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HPG5_SPIPD) HSP 1 Score: 152 bits (383), Expect = 9.180e-41 Identity = 75/131 (57.25%), Postives = 99/131 (75.57%), Query Frame = 1 Query: 10 GFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMKRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKRLQLQLTGFLEKSTSTFMEELWGLLVDAQNSLGGIPSAFLQDKKQEML 402 GFF+GT+ EQD+RFGD KKL+K MKF KI DQKV ++KKVNT+V+K W+ R+ L+GF+DD+ V N L E KLDP+ +Q++++GFLE FMEELWGLLV AQN++GGIP AFL KK+E++ Sbjct: 36 GFFKGTSAEQDARFGDKQKKLLKTMKFPKIYDQKV--DIKKVNTNVIKPWVTSRVVELMGFDDDVFVEFVFNLLEAE-KLDPRTMQIEISGFLETKAPIFMEELWGLLVSAQNTIGGIPQAFLDQKKEEIM 163
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Match: A0A2T9ZCZ4_9FUNG (PWI domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZCZ4_9FUNG) HSP 1 Score: 149 bits (375), Expect = 1.050e-40 Identity = 76/133 (57.14%), Postives = 102/133 (76.69%), Query Frame = 1 Query: 1 MSSGFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMKRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKRLQLQLTGFLEKSTSTFMEELWGLLVDAQNSLGGIPSAFLQDKKQEM 399 MS GFF+GT+ EQDSRFGD KKL++K+KFS IL+++V ++KKVN VMK W+A+++ LGF+DD+VV ++ L EE K+DPK++Q+ LTGFLE TS FMEELW L+ AQN + GIP F++ KKQEM Sbjct: 1 MSGGFFKGTSLEQDSRFGDPQKKLLQKLKFSPILNEQV--DIKKVNMTVMKPWVAKKVFETLGFDDDVVVEFVLSML-EEDKIDPKQMQINLTGFLESKTSAFMEELWKTLLSAQNGVQGIPREFIESKKQEM 130
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Match: A0A7S2SU80_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU80_9STRA) HSP 1 Score: 146 bits (368), Expect = 6.160e-40 Identity = 78/144 (54.17%), Postives = 103/144 (71.53%), Query Frame = 1 Query: 1 MSSGFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMKRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKRLQLQLTGFLEKSTSTFMEELWGLLVDAQNSLGGIPSAFLQDKKQEMLKAKASEAGRK 432 MSSGFFRGT+ +QDSR+G+++K+LMKKMKF+ +L KV KVN VM RWI +R+T LLGFED+IV+G +N+L PK+LQL +TGFLEK F+EELW LL AQ + GIP F++ KK+E+ A+ S +GRK Sbjct: 1 MSSGFFRGTSVDQDSRWGNTNKRLMKKMKFAAVLGTKVDTG--KVNLPVMNRWITERLTQLLGFEDEIVIGLVINFLEANKHPAPKQLQLDVTGFLEKKAGQFVEELWTLLAAAQENKNGIPPQFIEKKKEELAVAQ-SRSGRK 141
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Match: K8Z0N4_NANGC (Serine/arginine repetitive matrix protein 1 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z0N4_NANGC) HSP 1 Score: 141 bits (356), Expect = 6.930e-40 Identity = 72/134 (53.73%), Postives = 102/134 (76.12%), Query Frame = 1 Query: 1 MSSGFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMKRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKRLQLQLTGFLEKS-TSTFMEELWGLLVDAQNSLGGIPSAFLQDKKQEM 399 M+SGFFRGT +QD+RFG+++K+LMKKMKF+ IL +KV +++KVN DV+KRWI ++ LGFE+++ +G +NYL E D K+LQLQ T F+ K+ STF+ ELW LLVDAQ + GIP+AF++ KK+E+ Sbjct: 1 MASGFFRGTTADQDARFGNAEKRLMKKMKFASILSEKV--DLRKVNMDVIKRWITDQLVEFLGFEEEVTIGLVINYL--ESDTDAKKLQLQCTEFIGKNKASTFVTELWALLVDAQRNPSGIPTAFIEAKKKEL 130 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1.10.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1.10.3 >prot_C-tenellus_contig1.10.3 ID=prot_C-tenellus_contig1.10.3|Name=mRNA_C-tenellus_contig1.10.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=174bp MSSGFFRGTNTEQDSRFGDSDKKLMKKMKFSKILDQKVCVNMKKVNTDVMback to top mRNA from alignment at C-tenellus_contig1:20919..22174+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1.10.3 ID=mRNA_C-tenellus_contig1.10.3|Name=mRNA_C-tenellus_contig1.10.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1256bp|location=Sequence derived from alignment at C-tenellus_contig1:20919..22174+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1:20919..22174+ >mRNA_C-tenellus_contig1.10.3 ID=mRNA_C-tenellus_contig1.10.3|Name=mRNA_C-tenellus_contig1.10.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=522bp|location=Sequence derived from alignment at C-tenellus_contig1:20919..22174+ (Choristocarpus tenellus KU2346)back to top |