prot_C-linearis_contig10.494.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.494.1
Unique Nameprot_C-linearis_contig10.494.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1115
Homology
BLAST of mRNA_C-linearis_contig10.494.1 vs. uniprot
Match: D7FZY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY2_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 8.410e-86
Identity = 441/1134 (38.89%), Postives = 509/1134 (44.89%), Query Frame = 0
Query:    2 VPRRIYGGATEAF-APEGGDNDGRASMSHKTKSTEDYSVDDWGPDFVGGIVLTPKTGGPGSTWGRAQEALEECDDEVTDDSCAADFGCRSSSNPQRAPSTHSSPDRHTTSGMMMHGAPLPPAHHRAQDHAAAAFDVRDEDDQSAWSAPELSLELSTTXXXXXXXXXCSGNMVRGHRRTCAMIPSAVTRIGSRRMMSIXXXXXXXXXXXXXXXXXXXXXXXXXNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRRTRGFQTISKEEYTPMYVPTAWLNPKSNRWEPVDGYAVDMSGFGASEDGDXXXXXXXXXXXXXXDGNKGSDLEKSLSDPGSSMLRGPNRAA----ESTPPPXXXXXXXXXXXXXVPGDGSGRVGWGVGEEGMRNERTGSLN------RPPLSRDRSGQSMSSSAXXXXXXPTSQGRS-RRRAGAFEDRLVAFHLGPATRKHLANSVQAHDEAMMRFLGEQGYARAKREGAARLLRLPGVAAIAAEDASASPGKRRQPSHKRGSGGELS-GRGSSDARSSGGXXXXXXXXXXXXXXXXXXXXXXXEQGTPPSRTGRNHPNPAARLFPGTAPGPELASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPLRSRKGSGAPTAPVKGTSP-FQGRVSVPPPISTRR--TSPYSSRRGV-------------------PSVSPAGETKRHTGAAGGASPGSS---GRSPAAAAANRRRRSPASCSSRGASPKMSXXXXXXXXXXXXXXXXXXAEGGXXXXXXXXXXXXXAGSAASPTGAGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNASTGSPDRAVRRPSNSSGSRRXXXXXXXXXXXXSASTQRGTPDAPVRSSSLRRDASGGAGTQQRLRSEDAAALSASSASGAGGATRSGGRGSACSALPSRLSSRVLRSPPRRDLGGDPIT--RRATIASPPMSPRAVRLQRTSSSGRMSSWR---PAGRSWARAGGXXXXXXXXXXVHDSRRGGAEVGVGEXXXXXXXXXXXXXERERAARRLERFRYTAEFAANTVKERFSLFGGRTSAEVPFTGDL--RRGHRRRRSGGESST 1090
            + RRIY  +TE   APEGG+ND R S SH+TKSTEDYSVDDWG DFVGGIVLTPKTGGPG+ WGRAQ+ALEE D+E  D                             T G+               D        R   D++  S  E +   S++           G      RR            GS+                                                            RRP+RTRGFQTIS  EYTPMYVPTAWL+PKS+RW+PVDGYAVDMSGF                     DG+ G                  N  A     + PPP               G   GR G   GEEG +  R G         RP LSR  S  S+SSSA      P+SQ R  RR +  FEDRL AF LGPA R+HLA S QAHDEAM  FLGEQGYARAKREGAARLLR+PGVAA+AA++  A+    R+P  +  SGG    G+GS+  +SSG  XXXXXXXXXX                 P R+G++    A     G++ G     AXXXXXXXXXXXXXXXX                              XXXXX   XXXX   T P R RK      +P K  S   +G   V P +  R+  T+  ++ RG                     S SP    K   G    A P +    GR+ +  A  R RRS +  S   A+    XXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXX     S +G G                                               G+  RA      + GS               AS+   T +  VR+++            +RLRS  A         G GG++ SG  G      P R SS VLRS PRR LG    T  RRATIASPPMSPRAVRL R +SSGRMS+WR   PA       GG          V D+RR      VG              ERERAARRLERFRY AEFAANTVKERFSLFGGR SAEVPFTGDL  R GH+RRRSGGE+ST
Sbjct: 1645 ISRRIYQRSTEEGPAPEGGENDARTSASHRTKSTEDYSVDDWGADFVGGIVLTPKTGGPGTMWGRAQDALEEGDEETDD-----------------------------TDGL---------------DETRTLLLKRRGGDEAVASGREDAGWGSSSGEDAADGGDGDGGETPVQRRR-----------GSK----------------------------------------------------------LRRRPKRTRGFQTISLAEYTPMYVPTAWLDPKSHRWKPVDGYAVDMSGF-------------------DPDGSSGGGXXXXXXXXXXXXXXLSNAVAGNVSRNNPPP---------------GAEGGRAG---GEEGRQGARVGGGRAEGLGARPSLSRGASAVSVSSSAGTWAGTPSSQERGCRRPSRGFEDRLAAFQLGPAARQHLAKSEQAHDEAMALFLGEQGYARAKREGAARLLRMPGVAAVAADEEEANASLNRKPLKRGSSGGXXXPGKGSTSTKSSGARXXXXXXXXXX-----------------PRRSGQSVGGGAGT---GSSRGSSPQQAXXXXXXXXXXXXXXXXGTAVPSTPPRVSPYAARGRAKKSAAASSSGXXXXXGTPXXXXATPT-PGRRRKAGAREFSPKKTVSQRTEGGRRVSPGVKGRQGATAGAAAERGARIGNRXXXXXXXXXXXXXXXSRSPVLAPKTDDGFDAEAKPAAGRTLGRTGSKDADGRSRRSRSDSSVGMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASGNG-------------------------------------------TPQYGAAGRAPIGSRGTPGSSSRQRGRNADVTAAPASSPSSTTEPAVRAAA------------ERLRSSGA---------GRGGSSSSGTPGGVS---PPRASSHVLRSLPRRSLGFGSATAARRATIASPPMSPRAVRLCRAASSGRMSAWRRRVPASERLRTGGGGR--------VQDTRRA-----VGGVSAEAEAAAVATAERERAARRLERFRYMAEFAANTVKERFSLFGGRMSAEVPFTGDLPPRIGHQRRRSGGEAST 2527          
BLAST of mRNA_C-linearis_contig10.494.1 vs. uniprot
Match: A0A6H5KL36_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL36_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 5.660e-72
Identity = 422/1093 (38.61%), Postives = 496/1093 (45.38%), Query Frame = 0
Query:   45 DFVGGIVLTPKTGGPGSTWGRAQEALEECDDEV--TDDSCAADFGCRSSSNPQR-APSTHSSPDRHTTSGMMMHGAPLPPAHHRAQDHAAAAFDVRDEDDQSAWSAPELSLELSTTXXXXXXXXXCSGNMVRGHRRTCAMIPSAVTRIGSRRMMSIXXXXXXXXXXXXXXXXXXXXXXXXXNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRRTRGFQTISKEEYTPMYVPTAWLNPKSNRWEPVDGYAVDMSGFGASEDGDXXXXXXXXXXXXXXDGNKGSDLEKSLSDPGSSMLRGPNRAAESTPPPXXXXXXXXXXXXXVPGDGSGRVGWGVGEEGMRNE--RTGSLN-RPPLSRDRSGQSMSSSAXXXXXXPTSQGRS-RRRAGAFEDRLVAFHLGPATRKHLANSVQAHDEAMMRFLGEQGYARAKREGAARLLRLPGVAAIAAEDASASPGKRRQPSHKRGSGGELSGRGSSDARSSGGXXXXXXXXXXXXXXXXXXXXXXXEQGTPPSRTGRNH--PNPAARLFPGTAPGPELASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPLRSRK--GSGAPTAPVKGTSPFQGRVSVPP-------------------PISTRRTSPYSSRRGVPSVSPAGETKRHTGA---AGGASPGSSGRSPAAAAANRRRRSPASCSSRGASPK--MSXXXXXXXXXXXXXXXXXXAEGGXXXXXXXXXXXXXAGSAASPTGAGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNASTGSPD---RAVRRPSNSS---------------------------GSRRXXXXXXXXXXXXSASTQRGTPD-APVRSSSLRRDASGGAGTQQRLRSEDAAALSASSASG--------------AGGATRSGG--RGSACSALPSRLSSRVLRSPPRRDLGGDPIT--RRATIASPPMSPRAVRLQRTSSSGRMSSWRPAGRSWARAGGXXXXXXXXXXVHDSRRGGAEVGVGEXXXXXXXXXXXXXERERAARRLERFRYTAEFAANT 1053
            DFVGGIVLTPKTGGPG+ WGRAQEALEE D+E   TD       G   +SN Q  APSTH S +R T     +  AP PP         AA   +   D+QSAWSAPEL L   +     XXXXX           T AM  +++TR GS+  + +                                                       RRP+RTRGFQTIS  EYTPMYVPTAWL+PKS+RW+PVDGYAVDMSGFG        XXXXXXXX          D +K+LSD  +  L G N      PPP               G   GR     G +G R    R  SL  RP LSR  S  S+SSS       P+SQ R  +R +  FEDRL AF LGPA  +HLA S QAHDEAM  FLGE+GYARAKREGAARLLR+PGVAA+AA++  A+    R+P  +   GG    RGS+  RSSG                         +GT  ++  R     +PAARL   TAP     S  XXXXXXXXXXXXXXXXXXXXXXX                                      TP RS +  G G  T  ++G+SP Q   + P                    P +  R SPY++R         G  K+ + A     G++ G+ G S A     RRR +     SR  SPK  +S                  A  G             A +   P    + XXXXXXXXXXXXXXXX                            TGS D   R+ R  S+SS                               XXXXXXXXXXXX  ++  GTP  +  R + LR   + G+ ++QR R+ D  A  ASS S               + GA R G   RGS     P R SS VLRS PRR LG    T  RRATIASPPMSPRAVRL RT+SSGRMS+WR   ++  R G           V D+RR  AE GV               ERERAARRLERFRY AEFAANT
Sbjct: 1529 DFVGGIVLTPKTGGPGTMWGRAQEALEEGDEETDGTD-------GLDDTSNHQHGAPSTHGSSNRPTLQHEGIFSAPAPPL-------VAARASLDPGDEQSAWSAPELILSDGSDVGERXXXXXXXXXX------TYAM--TSMTRFGSKHRLLLKRWGGEKAVASGREDVEWGPSSGED-------AADGGDGDRGGTPVQRRRGSKLHRRPKRTRGFQTISLAEYTPMYVPTAWLDPKSHRWKPVDGYAVDMSGFGPEGSSGEGXXXXXXXXH---------DQKKNLSDAVAENLPGNN------PPP---------------GADGGRAAGAEGRQGARGGGGRAESLGARPSLSRGASAVSVSSSVGTWAGTPSSQERGCKRPSRGFEDRLAAFQLGPAALQHLAKSEQAHDEAMTLFLGEKGYARAKREGAARLLRMPGVAAVAADEQEANASLNRKPLKRGSGGGGGPTRGSTSTRSSGAKGRG--------------------KGTSRAKPAREKGGSSPAARL---TAPSSRRPSVRXXXXXXXXXXXXXXXXXXXXXXXASGVGKG-------------------------------TPRRSGQSVGGGTGTGSLRGSSPQQALRASPASARKTAXXXXXXXXXGTAVPSTPPRVSPYAAR---------GRAKKSSAAXXXGAGSTSGTPGSSSATPTPGRRRMA----DSREVSPKEAVSQGTHGSRRVSPGVKGRQRATAG-------------AAAEGGPWIGNRXXXXXXXXXXXXXXXXXSRSPVPTPKTESGFDAEVKPAAGHTLGRTGSKDADGRSRRSHSDSSVGMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGNGTPQHSAARRAPLRSRGAPGSSSRQRGRNADVTAAPASSPSSTTEPAVRTAAERLRSSGAGRGGSSSRGSPGGVSPPRASSHVLRSLPRRSLGFGSATAARRATIASPPMSPRAVRLHRTASSGRMSAWRRRVQASERLG-----IGGGGRVQDTRR--AEGGVSAEAKAAAVATA---ERERAARRLERFRYMAEFAANT 2472          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZY2_ECTSI8.410e-8638.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL36_9PHAE5.660e-7238.61Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1441827..1450913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.494.1mRNA_C-linearis_contig10.494.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1439873..1450974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.494.1 ID=prot_C-linearis_contig10.494.1|Name=mRNA_C-linearis_contig10.494.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1115bp
MVPRRIYGGATEAFAPEGGDNDGRASMSHKTKSTEDYSVDDWGPDFVGGI
VLTPKTGGPGSTWGRAQEALEECDDEVTDDSCAADFGCRSSSNPQRAPST
HSSPDRHTTSGMMMHGAPLPPAHHRAQDHAAAAFDVRDEDDQSAWSAPEL
SLELSTTSGGGGGGGGCSGNMVRGHRRTCAMIPSAVTRIGSRRMMSIRRR
SGGGGGDDGSSSDDEDGGGGGGNGNGNGNGGEREGARRPAAGSSRRTSSK
TRRRPRRTRGFQTISKEEYTPMYVPTAWLNPKSNRWEPVDGYAVDMSGFG
ASEDGDDNDNDNNNNNDDEDDGNKGSDLEKSLSDPGSSMLRGPNRAAEST
PPPRPPPPPPPPPHPPVPGDGSGRVGWGVGEEGMRNERTGSLNRPPLSRD
RSGQSMSSSAGTGAGTPTSQGRSRRRAGAFEDRLVAFHLGPATRKHLANS
VQAHDEAMMRFLGEQGYARAKREGAARLLRLPGVAAIAAEDASASPGKRR
QPSHKRGSGGELSGRGSSDARSSGGGGRGTAKAKARAGATGGGGGGGGEQ
GTPPSRTGRNHPNPAARLFPGTAPGPELASASSTQGEGGSSGGSGSRSKR
RRSSSRPRARKAKSPSPSPARGLAVAVRGGASTTSGAGAGSGTTPLRSRK
GSGAPTAPVKGTSPFQGRVSVPPPISTRRTSPYSSRRGVPSVSPAGETKR
HTGAAGGASPGSSGRSPAAAAANRRRRSPASCSSRGASPKMSASQQVEAD
RRRSSRRQSPAEGGARARAGARRRAGGAGSAASPTGAGKSATAAARSPSC
GGSASGRVAGSSRTRRSRSDSVATAASATVSNASTGSPDRAVRRPSNSSG
SRRRGSGSGGGGSKASASTQRGTPDAPVRSSSLRRDASGGAGTQQRLRSE
DAAALSASSASGAGGATRSGGRGSACSALPSRLSSRVLRSPPRRDLGGDP
ITRRATIASPPMSPRAVRLQRTSSSGRMSSWRPAGRSWARAGGGGGGGGG
GGHVHDSRRGGAEVGVGEVSAEAVAAAAALAERERAARRLERFRYTAEFA
ANTVKERFSLFGGRTSAEVPFTGDLRRGHRRRRSGGESSTGGASVGSGSS
AGLGSMVGLTTVWR*
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