prot_C-linearis_contig10.486.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.486.1
Unique Nameprot_C-linearis_contig10.486.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length557
Homology
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BLAST of mRNA_C-linearis_contig10.486.1 vs. uniprot
Match: A0A6H5LBA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBA6_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.910e-32
Identity = 92/179 (51.40%), Postives = 107/179 (59.78%), Query Frame = 0 
Query:    2 VGECGLVAGCTGSKPLTVITQEELNELGSLHDVDLFVKLSALRLGGLWCRDCHQSFIDATSAGVQQQQ-QQESGRKREFAEISEATPPDPGPTRAGTEQTRELAARELAAMR-DTPPDAAASPLAASAPAEG---------EAAAGPRFTVTSPYPSPREAPSGPNLRTLSLAAENGTG 169
            VG CGLVAGC G K +T ITQE+LN LGSL DVDLFVKLSALR+GG+WC DCHQ   +A S   QQQQ Q ESGRKR+ AE      P P P  A    TRE     LAAMR +TP DAA++P AA+              E A G  ++ ++PYPSP  AP       L  + ENG G
Sbjct:    7 VGPCGLVAGCAGDKQVTFITQEQLNGLGSLRDVDLFVKLSALRVGGIWCEDCHQLLFNAASGSKQQQQLQPESGRKRDHAETMTHERPQPQPLVAPPGDTREPVGHGLAAMRGNTPSDAASTPQAATXXXXXXXXXXXXPVEEADGSTYSDSAPYPSPPAAPEVNLAAALPPSIENGAG 185
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBA6_9PHAE1.910e-3251.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1221030..1223494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.486.1mRNA_C-linearis_contig10.486.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1221024..1224371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.486.1 ID=prot_C-linearis_contig10.486.1|Name=mRNA_C-linearis_contig10.486.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=557bp
MVGECGLVAGCTGSKPLTVITQEELNELGSLHDVDLFVKLSALRLGGLWC
RDCHQSFIDATSAGVQQQQQQESGRKREFAEISEATPPDPGPTRAGTEQT
RELAARELAAMRDTPPDAAASPLAASAPAEGEAAAGPRFTVTSPYPSPRE
APSGPNLRTLSLAAENGTGEVLAAAPAGHHATTAAPWAVESAAPTPFAVD
GGGKVEGAGAGTGEKVPTAPALTTTAPWSRQAQEAPPASTAEAAEVAEAA
AAVAAAATAAVAVEAAHQLPLPQHQPPPQLQAALQHHSASVPSQHQLPPP
PPPQQQQQQQQQQQQQQQQHPHPHQQPQQRPNQQNGSLPHLTTPAQQAAV
AGAWVGFSPPGATTITSTAPHAHGENATAPFAPPPPGTGAPTSPTHADAN
AVHGVMATVGGQVAYPQWVATMLPQQHQQHNGRAGGVGHAVGAAAPGRSL
NGGAGSGSGGGGGDGRGRRGGARPRQRCGRDSDWRPAWHGDGAWGRRHRR
RRLLLPGLRGETVLRHEGRQEAVRLRRPPGGGPGRHQAPPGAPQLRLRRL
PGAPPV*
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