prot_C-linearis_contig10.436.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.436.1
Unique Nameprot_C-linearis_contig10.436.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length202
Homology
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 5.400e-28
Identity = 76/139 (54.68%), Postives = 94/139 (67.63%), Query Frame = 0
Query:   79 SQAAGERQASDQRRVFATMMAKSKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSGGPKTKNPAQAPKKGRPKNKRGG--------------GATGSAPPTTGNPEGRLDNSRRNTRMRDSCGPGSG---KRIKTE 200
            ++AA  R A+D+RRVFA+MMAKSKENVSEILRTV   KA+E+QA++D+ V+F+L + +G    KNPAQ  K GRPK  + G              G TGSA P  GNP+GR+D SRR  RMRDS GPGSG   +RIK E
Sbjct:  462 AKAAAARSATDERRVFASMMAKSKENVSEILRTVPHAKAMEIQADLDKWVRFQLAEATGQNSAKNPAQVKKAGRPKKSKSGEQQEKRGDGNGAPPGQTGSAKPV-GNPQGRMDKSRRAKRMRDSAGPGSGGPSRRIKKE 599          
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Match: A0A6H5L2H3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H3_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 4.160e-21
Identity = 63/133 (47.37%), Postives = 85/133 (63.91%), Query Frame = 0
Query:   79 SQAAGERQASDQRRVFATMMAKSKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSGGPKTKNPAQAPKKGRPKNKRGGGA-------------TGSAPPTTGNPEGRLDNSRRNTRMRDSCGPGSGKRIK 198
            ++A  +R  SD RRVFAT+MAK+KENV+EI+RTV   KALE+QAE+D+ V+F+L + +G  K+ NPAQ   KGRPK  +  G+             +GS  P  GNPEGR D SRR   ++D  G GSG + +
Sbjct:  419 AKAVADRSGSDHRRVFATLMAKNKENVTEIMRTVPHAKALEIQAELDKWVRFELAEATGENKSGNPAQVKAKGRPKKSKSEGSKQDRHDDNGAPADSGSVQPV-GNPEGRRDKSRREKMIKDVSGAGSGAKTR 550          
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Match: A0A6H5KGV5_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV5_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.510e-19
Identity = 67/141 (47.52%), Postives = 86/141 (60.99%), Query Frame = 0
Query:   64 AKVYDPIINCRLSSPSQAAGERQASDQRRVFATMMAKSKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSG-------GPKTKNPAQAPKKGRPKN--KRGGGATGSAPPTTGNPEGRLDNSRRNTRMRDSCGPGSGK 195
            A +YD   +   + P  A   R+ +DQRR FATMMAKSKENVSEILR+V   +ALE+Q  +D+ VKF+L    G       GP   NP  APKKGRPK   K+  G  G +   + NPEG++  + + TR RDS GPGSG+
Sbjct:  242 APIYDNNGDMDGALPQDA---RKVADQRRAFATMMAKSKENVSEILRSVNTAEALEIQRAVDECVKFQLTKRLGMLDGTAIGPG--NPEMAPKKGRPKGSTKQATGTIGQSKARSRNPEGQMGTTLKKTRFRDSYGPGSGR 377          
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Match: A0A6H5K7Y9_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Y9_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 4.100e-19
Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 0
Query:   85 RQASDQRRVFATMMAKSKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSG-------GPKTKNPAQAPKKGRPKN--KRGGGATGSAPPTTGNPEGRLDNSRRNTRMRDSCGPGSGK 195
            R+ +DQRR FATMMAKSKENVSEILR+V   +ALE+Q  +D+ VKF+L    G       GP   NP  APKKGRPK   K+  G  G +   + NPEG++  + + TR RDS GPGSG+
Sbjct:  399 RKVTDQRRAFATMMAKSKENVSEILRSVNTAEALEIQRAVDECVKFQLTKRLGMLDGTAIGPG--NPEMAPKKGRPKGSTKQATGTIGQSKARSRNPEGQMGTTLKKTRFRDSYGPGSGR 516          
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Match: A0A6H5JYU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU5_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.430e-17
Identity = 59/118 (50.00%), Postives = 74/118 (62.71%), Query Frame = 0
Query:   77 SPSQAAGERQASDQRRVFATMMAKSKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSGGPKTKNPAQAPKKGRPKNKRGGGA-------------TGSAPPTTGNPEGRLDNSRR 181
            S ++AA ER ASD R VFAT+MAK+KENV+E  RT    KALE+QAE+D+ V+F+L D +G  K+ NPAQ   KGRP   +  G+             +GS  P  GNPEGR D SRR
Sbjct:  347 SAAKAAAERSASDHRHVFATLMAKNKENVTETRRTAPHAKALEIQAELDKWVRFQLADATGENKSGNPAQVKAKGRPNKSKSEGSKQDRHDDNGAPADSGSVQPV-GNPEGRTDKSRR 463          
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Match: A0A6H5KG54_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG54_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 5.050e-17
Identity = 60/120 (50.00%), Postives = 75/120 (62.50%), Query Frame = 0
Query:   85 RQASDQRRVFATMMAKSKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSG-------GPKTKNPAQAPKKGRPKN--KRGGGATGSAPPTTGNPEGRLDNSRRNTRMRDSCGPGSGK 195
            R+ +DQRR FATMMAKSKENVSEILR V   +ALE+Q  +D+ VKF+L    G       GP   NP  APK GRPK   K+  G  G +   + NPEG++  +   TR+RDS GP SG+
Sbjct:  803 RKVADQRRAFATMMAKSKENVSEILRPVNTAEALEIQRAVDECVKFQLTKRLGMLDGTAIGPG--NPEMAPKNGRPKGSTKQATGTIGQSKARSRNPEGQMGTTLEKTRLRDSYGPRSGR 920          
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Match: A0A6H5JZB4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB4_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.350e-14
Identity = 43/76 (56.58%), Postives = 60/76 (78.95%), Query Frame = 0
Query:   79 SQAAGERQASDQRRVFATMMAKSKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSGGPKTKNPAQAPKKGRPK 154
            ++AA +R ASD RRVFAT+MA++KENV+EI++TV   KA E+QAE+D+ V+F+L + +G  K+ NPAQ   KGRPK
Sbjct:  908 AKAAADRSASDHRRVFATLMARNKENVTEIMKTVPHAKASEIQAELDKWVRFQLAEATGEKKSGNPAQVKAKGRPK 983          
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Match: A0A6H5KFX8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX8_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 4.770e-13
Identity = 52/101 (51.49%), Postives = 65/101 (64.36%), Query Frame = 0
Query:   85 RQASDQRRVFATMMAKSKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSG-------GPKTKNPAQAPKKGRPKN--KRGGGATGSAPPTTGNPEGRL 176
            R+ +DQRR FATMMAKSKENVSEILR+V   +ALE+Q  +D+ VKF+L    G       GP   NP  APKKGRPK   K+  G  G +   + NPEG++
Sbjct:  249 RKVADQRRAFATMMAKSKENVSEILRSVNTAEALEIQRAVDECVKFQLTKRLGMLDGTAIGPG--NPEMAPKKGRPKGSTKQATGTIGQSKARSRNPEGQM 347          
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Match: A0A6H5K9T1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T1_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.050e-13
Identity = 53/127 (41.73%), Postives = 78/127 (61.42%), Query Frame = 0
Query:   76 SSPSQAAGERQASDQRRVFATMMAKSKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSGGPKTKNPAQAPKKGRPKN---KRGGGATGSAPPTTGNPEGRLDNSRRNTRMRD-SCGPGSGKRIK 198
            + P   A +R ASD+RRV+A +MAKSKE V +I+R+V   +AL +Q ++ + +++ L+  +GG   +NP +APKKGRPK    ++       A    GNPEG+   SR+  RMRD + G  S KR K
Sbjct: 1293 TEPGGGAQDRSASDKRRVYAHLMAKSKELVGDIMRSVPLHQALSVQDKVGEYLRYLLNSSAGGTGAQNPGEAPKKGRPKKDGRRQPLQHRSGAKEEPGNPEGQQGKSRQTKRMRDFNNGRRSTKRSK 1419          
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Match: A0A6H5LMA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMA8_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 3.270e-12
Identity = 47/103 (45.63%), Postives = 65/103 (63.11%), Query Frame = 0
Query:   98 MAKSKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSGGPKTKNPAQAPKKGRPKNKRGGGA-------------TGSAPPTTGNPEGRLDNSRRNTRMRD 187
            MAK+KE+V+EI+RTV   KALE+QAE+D+ V+F+L + +G  K+ N AQ   KGRPK  +  G+             +GS  P  GNPEGR D SRR  R+++
Sbjct:    1 MAKNKESVTEIMRTVPHAKALEIQAELDKWVRFQLAEATGENKSGNSAQVKAKGRPKKSKSEGSKQDRHDDNGAPADSGSVQPV-GNPEGRRDKSRREKRIKE 102          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JY17_9PHAE5.400e-2854.68SWIM-type domain-containing protein n=3 Tax=Ectoca... [more]
A0A6H5L2H3_9PHAE4.160e-2147.37SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KGV5_9PHAE1.510e-1947.52SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K7Y9_9PHAE4.100e-1951.67SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JYU5_9PHAE1.430e-1750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KG54_9PHAE5.050e-1750.00SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JZB4_9PHAE2.350e-1456.58SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KFX8_9PHAE4.770e-1351.49SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K9T1_9PHAE7.050e-1341.73SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LMA8_9PHAE3.270e-1245.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:172157..173392 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.436.1mRNA_C-linearis_contig10.436.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 171585..173403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.436.1 ID=prot_C-linearis_contig10.436.1|Name=mRNA_C-linearis_contig10.436.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=202bp
MSQARRMAGKGRTSNAYLSTGNRHYNVLSELKDLLAQILDNPRGDTDGIA
VNHPQLRAARLRAAKVYDPIINCRLSSPSQAAGERQASDQRRVFATMMAK
SKENVSEILRTVTFDKALELQAEIDQLVKFKLHDPSGGPKTKNPAQAPKK
GRPKNKRGGGATGSAPPTTGNPEGRLDNSRRNTRMRDSCGPGSGKRIKTE
K*
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