prot_C-linearis_contig10.435.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.435.1
Unique Nameprot_C-linearis_contig10.435.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length187
Homology
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BLAST of mRNA_C-linearis_contig10.435.1 vs. uniprot
Match: A0A6H5L1X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X5_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.560e-32
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 0 
Query:   60 LGLSREDMNTTVNAVSQATIASMLASLEDQLNAYNATHPAEEDASSQSTAGSSQSAPV--AVAVRTTQAPGFDLIGRARAWLHEREDPADGGGGKKNQEFNVVLFKNLHNVYQKNLAKCKHKSCGNIDDA 187
            +GLSR++M   +N + Q  I++M+ SL      +N+  P + DASSQ T  SSQS+P    + ++  QAPGFDL+ RARAW+  R+ PA+GGG K NQ+F  V FKN HNVY+K +AKCK K CG +DDA
Sbjct:    1 MGLSRKEMCLLMNNIGQDIISNMMGSLGTDQRDFNSCQPKDADASSQETQESSQSSPADAVLQLQPEQAPGFDLLRRARAWVDARKLPAEGGGNKTNQDFLNVFFKNCHNVYKKRMAKCKDKKCGTLDDA 130
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1X5_9PHAE1.560e-3250.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:126356..128150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.435.1mRNA_C-linearis_contig10.435.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 126354..128150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.435.1 ID=prot_C-linearis_contig10.435.1|Name=mRNA_C-linearis_contig10.435.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=187bp
QSQLGTEGPSAEHQARGIYAPGKRANGMFSYVLSRHSTLIAVSAESGEPE
REPYEAHEVLGLSREDMNTTVNAVSQATIASMLASLEDQLNAYNATHPAE
EDASSQSTAGSSQSAPVAVAVRTTQAPGFDLIGRARAWLHEREDPADGGG
GKKNQEFNVVLFKNLHNVYQKNLAKCKHKSCGNIDDA
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