prot_C-linearis_contig99.17186.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig99.17186.1
Unique Name	prot_C-linearis_contig99.17186.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	1265

Homology

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BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Match: D8LR20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR20_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 4.180e-92
Identity = 272/383 (71.02%), Postives = 283/383 (73.89%), Query Frame = 0

Query:    1 MADSGTG-TMPSEDMPRLGPTWSRGGGMFKPPKRPEGHPEGEDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARKAPPVFGHASRGGLEALASATTQRGFAPRDGSGGLSGGTPAVEAGAAGGVGGVRIAAGPXXXXXXXXXXX----WRERERAASMDKRKVQRFSPQDLVALRRAPTRPLGKMPILGADISVIVSEEPLEPVTAIPADEEAISKASSKSIKSDKIPLSFLIWAAAAERQPMRGRRSRWGSGEDGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRESEDDLWDDVGGXXXXXXXXXXXXXXXXDAGGGLHGVEGMDLLSMAQAADKFQEQMDSMARRMEGVELHEQ 378
            MADSGT   M  EDMPRLGPTWSRGGGMFKPPKRPEGH EGE+G          XXXXXXXXXXXX             +RKAPPVFGHA+RGGLEALASATTQRGFAPRDGSGGLSGGT AVE G   GVGGVRIAAGPXXXXXXXX       W ERERAAS+DKRKVQRFSP++L+ALRRAPTRPLGKMP+LG DIS+IVSEEPLEPVTA PAD+EAIS+                IWAAAAERQPMRGRRSRWG      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              D  GGLHGVEGMDLLSMAQ ADKFQEQMDSM RRMEGVELHEQ
Sbjct:    1 MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRPEGHVEGEEG-------VGTXXXXXXXXXXXXRGSTLASSAADPPSRKAPPVFGHAARGGLEALASATTQRGFAPRDGSGGLSGGTAAVETG---GVGGVRIAAGPXXXXXXXXGLGPPGRW-ERERAASIDKRKVQRFSPEELLALRRAPTRPLGKMPVLGGDISIIVSEEPLEPVTATPADQEAISR----------------IWAAAAERQPMRGRRSRWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-----------------------AADGSGGLHGVEGMDLLSMAQKADKFQEQMDSMKRRMEGVELHEQ 333

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BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Match: A0A6H5KUY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY1_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 2.660e-64
Identity = 156/255 (61.18%), Postives = 167/255 (65.49%), Query Frame = 0

Query:    1 MADSGTG-TMPSEDMPRLGPTWSRGGGMFKPPKRPEGHPEG---------------------------EDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSA-----RKAPPVFGHASRGGLEALASATTQRGFAPRDGSGGLSGGTPAVEAGAAGGVGGVRIAAGPXXXXXXXXXXX----WRERERAASMDKRKVQRFSPQDLVALRRAPTRPLGKMPILGADISVIVSEEPLEPVTAIPADEEAISK 218
            MADSGT   M  EDMPRLGPTWSRGGGMFKPPKRPEGH EG                           + G                                  SA     RKAPPVFGHA+RGGLEALASATTQRGFAPRDGSGGLSGGT AVE G   GVGGVRIAAGPXXXXXXXX       W +RERAAS+DKRKVQRFSP++L+ALRRAPTRPLGKMP+LG DIS+IVSEEPLEPVTA PAD+EAIS+
Sbjct:    1 MADSGTERAMAPEDMPRLGPTWSRGGGMFKPPKRPEGHLEGVGHRTTLGEDWRVLGIGVSLNCWGVFRDKGLLLFAARDQEEGVGTGVPSPGTGAGGGRASTLASSAADPPSRKAPPVFGHAARGGLEALASATTQRGFAPRDGSGGLSGGTAAVETG---GVGGVRIAAGPXXXXXXXXGLGPPGRW-DRERAASIDKRKVQRFSPEELLALRRAPTRPLGKMPVLGGDISIIVSEEPLEPVTATPADQEAISR 251

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BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Match: F0YBM2_AURAN (GYF domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBM2_AURAN)

HSP 1 Score: 74.7 bits (182), Expect = 7.600e-13
Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 0

Query:  903 WYYLDPHNRIQGPFEGSEMRQWFEAGYFQRNLPVRRGVVGEFIPLERLFPGQGATTAFLEAP 964
            W+Y DP  + QGPFE  +MRQWF AGYF  +LP+R+G  G+F+PL RLF       AF+  P
Sbjct:    5 WFYKDPQGQHQGPFEAPQMRQWFNAGYFDDDLPLRQGESGDFVPLGRLF--SSPQDAFVTKP 64

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BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Match: A0A7S2W5H4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5H4_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 5.470e-11
Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 0

Query:  902 GWYYLDPHNRIQGPFEGSEMRQWFEAGYFQR--NLPVRRGVVGEFIPLERLFPGQGATTAFLEAPPR 966
            GWYYLDPH R+QGPF GS MR+W + G+F R  +LP+RRG  G F+PL + F   G+   F +  P+
Sbjct:  496 GWYYLDPHQRVQGPFSGSRMREWHQDGHFDRLPDLPIRRGESGPFVPLSQAF---GSGEKFADVTPQ 559

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BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Match: A0A6H5KW39_9PHAE (GYF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW39_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.620e-9
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0

Query:  902 GWYYLDPHNRIQGPFEGSEMRQWFEAGYFQ 931
            GW+YLDP NRIQGPF+GSEMRQWFEAGYFQ
Sbjct:  177 GWFYLDPQNRIQGPFDGSEMRQWFEAGYFQ 206

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BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Match: A0A8J2SWM6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWM6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.600e-9
Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 0

Query:  903 WYYLDPHNRIQGPFEGSEMRQWFEAGYFQRNLPVRRGVVGEFIPLERLF---PGQGATTA--FLEAPP 965
            W+Y DP   +QGPFE ++MRQWF+AGYF  +LP+R+G  G+F  L+ LF   PG    T    L APP
Sbjct:  325 WFYRDPQGAVQGPFEATQMRQWFQAGYFDDDLPLRQGSNGDFHSLKLLFTNPPGDAFVTKPKDLSAPP 392

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BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Match: A0A7S3XSI3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSI3_HETAK)

HSP 1 Score: 65.9 bits (159), Expect = 2.760e-8
Identity = 33/65 (50.77%), Postives = 39/65 (60.00%), Query Frame = 0

Query:  903 WYYLDPHNRIQGPFEGSEMRQWFEAGYFQRNLPVRRGVVGE---FIPLERLFPGQGATTAFLEAP 964
            W Y DP  + QGPF  ++MRQWFE GYFQ +LP+R     E   F PL +LFPG     AF  AP
Sbjct:  121 WQYRDPAGQCQGPFSSADMRQWFEEGYFQPDLPLRPLQAPEGTPFAPLGQLFPG--GADAFAAAP 183

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BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Match: A0A485K828_9STRA (Aste57867_1245 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K828_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.820e-8
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0

Query:  903 WYYLDPHNRIQGPFEGSEMRQWFEAGYFQRNLPVRRGVVGEFIPLERLF 951
            W+YLDP    QGPF+ SEMR+WFEAGYF+ +LP+R G  GEF  L   F
Sbjct:  335 WFYLDPQGLQQGPFKSSEMREWFEAGYFKPHLPIRFGNEGEFASLANHF 383

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BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Match: F0W5M6_9STRA (Uncharacterized protein AlNc14C21G2191 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5M6_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 8.390e-8
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0

Query:  903 WYYLDPHNRIQGPFEGSEMRQWFEAGYFQRNLPVRRGVVGEFIPLERLF 951
            W+YLDP  + QGPF+ SEMR+WF+AGYF+ +LP+R   V  F PL   F
Sbjct:  405 WFYLDPQGQQQGPFKTSEMREWFDAGYFKPHLPIRSSQVSRFTPLANHF 453

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BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Match: A0A6S8CDN4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8CDN4_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 8.420e-8
Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 0

Query:  903 WYYLDPHNRIQGPFEGSEMRQWFEAGYFQRNLPVRRGVV-GEFIPLERLFPGQGATTAFLEAPPRGD 968
            WYY DP   IQGPFE  +MRQWF+AGYF  +LPVR+    G F+ L  +F    A TAF+ APP  D
Sbjct:  440 WYYRDPQGNIQGPFEPMQMRQWFDAGYFDDDLPVRQQTPDGPFLALGIVF--SSARTAFV-APPAVD 503

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot

BLAST of mRNA_C-linearis_contig99.17186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LR20_ECTSI	4.180e-92	71.02	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KUY1_9PHAE	2.660e-64	61.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
F0YBM2_AURAN	7.600e-13	51.61	GYF domain-containing protein (Fragment) n=1 Tax=A...	[more]
A0A7S2W5H4_9STRA	5.470e-11	50.75	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A6H5KW39_9PHAE	3.620e-9	90.00	GYF domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A8J2SWM6_9STRA	4.600e-9	50.00	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S3XSI3_HETAK	2.760e-8	50.77	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A485K828_9STRA	4.820e-8	59.18	Aste57867_1245 protein n=1 Tax=Aphanomyces stellat...	[more]
F0W5M6_9STRA	8.390e-8	55.10	Uncharacterized protein AlNc14C21G2191 n=1 Tax=Alb...	[more]
A0A6S8CDN4_9STRA	8.420e-8	53.73	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 611..649
None	No IPR available	COILS	Coil	Coil	coord: 770..797
None	No IPR available	COILS	Coil	Coil	coord: 972..1061
None	No IPR available	COILS	Coil	Coil	coord: 664..763
None	No IPR available	COILS	Coil	Coil	coord: 801..825
None	No IPR available	COILS	Coil	Coil	coord: 1131..1166
None	No IPR available	COILS	Coil	Coil	coord: 524..562
None	No IPR available	COILS	Coil	Coil	coord: 403..430
None	No IPR available	COILS	Coil	Coil	coord: 842..883
None	No IPR available	PANTHER	PTHR14445	GRB10 INTERACTING GYF PROTEIN	coord: 375..476
None	No IPR available	PANTHER	PTHR14445:SF41		coord: 375..476
IPR003169	GYF domain	SMART	SM00444	gyf_5	coord: 901..958 e-value: 4.6E-10 score: 49.4
IPR003169	GYF domain	PFAM	PF02213	GYF	coord: 903..947 e-value: 3.9E-17 score: 61.7
IPR003169	GYF domain	PROSITE	PS50829	GYF	coord: 900..948 score: 13.998
IPR035445	GYF-like domain superfamily	GENE3D	3.30.1490.40		coord: 902..950 e-value: 3.9E-10 score: 40.9
IPR035445	GYF-like domain superfamily	SUPERFAMILY	55277	GYF domain	coord: 901..952

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig99	contig	C-linearis_contig99:422980..434574 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig99.17186.1	mRNA_C-linearis_contig99.17186.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig99 421169..444330 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig99.17186.1 ID=prot_C-linearis_contig99.17186.1|Name=mRNA_C-linearis_contig99.17186.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1265bp
MADSGTGTMPSEDMPRLGPTWSRGGGMFKPPKRPEGHPEGEDGNGGGTGA
PSPGGGAGASGRGSTAASSTGESSTSTSARKAPPVFGHASRGGLEALASA
TTQRGFAPRDGSGGLSGGTPAVEAGAAGGVGGVRIAAGPPPPPEAGGGGG
WRERERAASMDKRKVQRFSPQDLVALRRAPTRPLGKMPILGADISVIVSE
EPLEPVTAIPADEEAISKASSKSIKSDKIPLSFLIWAAAAERQPMRGRRS
RWGSGEDGPGGGGPPPPGHGHGHGHGHGGGGGGGGRWGGGGGGGGGGGGD
RSHIHRRESEDDLWDDVGGGGGGGGGGGGGDGNGNDAGGGLHGVEGMDLL
SMAQAADKFQEQMDSMARRMEGVELHEQQEEARRKARDDEFQQRKRAASV
SSNSSASQQQQQQQQQQQQQQQQQQQQQQQPVSTPQSTAATLVSVSKSHP
VLDPAALLSSSPSQQQQQQQQSERSLAQQGGAGTSEGGSRMGMGMDSGGA
PPPPPAAETLASSRKTRRSPPLVVVAAEQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQAQGRRDPGADLLSMLHQQSVVHSQQQQSREREQQLGGGAQ
SQQQQQQHRQQQQLLLQQEALQRRLQAQRRELEANAELLQKQQARQLQQQ
AMQHQEQRNREHLLEQSQQQQQRVQREAEVARLRAVQQQQQQQQRELYQQ
QQRAQQQAHLLQQQQLQKQQANQLAEQQRQAQRAARHLTEMQEAALQERN
DRQRHLLEQAQLQQREQLRERELRANAAQLLQQQQQAQQAQQAQQRRRLQ
LYEQQQRAEAVRAEMQQQQQQQQQQQQPPPPPSTTTTTPGQLTQQQVQQR
QQLQQLQRMQQQQQQQQQQQQQQQAAAEAASEREAAAEAARGGNGSGGGG
SGWYYLDPHNRIQGPFEGSEMRQWFEAGYFQRNLPVRRGVVGEFIPLERL
FPGQGATTAFLEAPPRGDDKANANANASASAYRRQEEQQQQQQQRRMSQE
SEEAAMQQQQQQQQALRQRQQQQRQQQEEQQQQQLLLQQQQQQQQQLLRE
QQQQQQQQQQQQVRPSKGQGLQCAHVAEDSSARSMPRAGSSANILDAWGS
PHAESVASNNSSNNLRGMQQQQVASPAADGVAEEAKRRQQQQQQQQQQQQ
QQQQQQQQQLRQQQVQQQAQQQAQQRAQPPPPPPPPTAPPPQQQQQQQQQ
QQQGGAMQPLLRLRAMLGVEERALRRRRTRNPSWRYRRKRAGAGSRPSGS
SSSSNNSSCSSNSL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003169	GYF
IPR035445	GYF-like_dom_sf