prot_C-linearis_contig99.17167.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig99.17167.1
Unique Nameprot_C-linearis_contig99.17167.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length253
Homology
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match: D7G7U8_ECTSI (Thylakoid lumenal 15 kDa protein, chloroplast (P15) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U8_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 1.540e-76
Identity = 163/213 (76.53%), Postives = 179/213 (84.04%), Query Frame = 0
Query:   40 SMSLRGNAAKCFPAILLGVALATSPLSVPLLDNHAVNSNGVLGASPVFADEDKGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGCP 252
            +M+L  +AA+C PA+LLGV L TS    PLLD+ A ++  VLGASPVFAD DKGMSSVSDSKLS+GAASTGDKGARKTVTRGVNIENADYH KDLS VSFQQSLVRGTN              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +VTEAY+SGATKMEPA +EGADFTDTFLRKDQV+YLC L++ KGTNPV+GVDTRDSLGCP
Sbjct:   38 TMNLFNDAARCVPAVLLGVTLTTS---APLLDSPAAHT-AVLGASPVFAD-DKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLETAKGTNPVSGVDTRDSLGCP 245          
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match: A0A835YUD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD1_9STRA)

HSP 1 Score: 154 bits (390), Expect = 6.540e-43
Identity = 107/160 (66.88%), Postives = 120/160 (75.00%), Query Frame = 0
Query:   92 KGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 251
            +G SSVSD+K+  GAAST D G+RK +TRGVN+ENAD+HGKD+SGVSFQQSLVRGTN                   XXXXXXXXXXXXXXXXXXXXXXXX      Y+SGATK EP ++EGADFTDTFLRKDQ+ YLC +   KGTNPVTGVDT DSL C
Sbjct:   75 EGASSVSDTKMLSGAASTLDTGSRKIITRGVNLENADFHGKDMSGVSFQQSLVRGTNFASSKLIGSGFFDADLSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATKFEPKDIEGADFTDTFLRKDQIMYLCAI--AKGTNPVTGVDTADSLSC 232          
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match: A0A7S2CVZ3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVZ3_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.680e-32
Identity = 102/196 (52.04%), Postives = 127/196 (64.80%), Query Frame = 0
Query:   59 ALATSPLSVPLLDNHAVNSNGVLGASPVFADEDKGMSSVSDSKLSIGAAST--GDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGCP 252
            A+++  +  P     A+ +  +L A+P FA+ D G S+V ++K+  G AST    +GARKT+TRGV ++ A++ G+DL+GVSFQQS +RG                   XXXXXXXXXXXXXXXXXXXXXXXXXX         GAT  + A +EGADFTDTFLRKDQ K LC   + KGTNP TGVDTRDSL CP
Sbjct:   15 AVSSMEIKAPAAAASALAAALLLSATPAFAESDGGASNVENTKIMNGGASTIVNQRGARKTITRGVQLDKANFAGEDLTGVSFQQSQIRGGVFEKTKLLGASFFDATLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSFKDAKIEGADFTDTFLRKDQQKELCA--TAKGTNPTTGVDTRDSLMCP 208          
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match: A0A7S1BVJ1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVJ1_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.750e-30
Identity = 110/218 (50.46%), Postives = 132/218 (60.55%), Query Frame = 0
Query:   35 PSMATSMSLRGNAAKCFPAILLGVALATSPLSVPLLDNHAVNSNGVLGASPVFADEDKGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPA-NVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 251
            PS A S+  R  AA    A+LL  +LA SPL     DN A +                    VS+ K++ G AST   G   T+TRGVN++ AD+ G+ L GV+FQQS+VR  NXXXXXXXXXXXXXXXXXXXXXXXXXXXX               AVV EAY+ G T      ++EGADF+DT+LR DQ KYLCE  + KGTN VTG+DTR+SL C
Sbjct:    6 PSAAASLPDR--AASLAAALLLASSLALSPLPSSAADNGATD--------------------VSNQKITTGGASTLQSGRTITITRGVNLDRADFGGQKLKGVAFQQSIVRDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNLEMCQLNRANLRDAVVREAYVGGTTMFTGIKSIEGADFSDTYLRADQKKYLCEHPTAKGTNSVTGMDTRESLMC 201          
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match: A0A448ZI41_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI41_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.170e-30
Identity = 87/168 (51.79%), Postives = 115/168 (68.45%), Query Frame = 0
Query:   85 PVFADEDKGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPA-NVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 251
            P FAD+  G ++ S++K++ G AST   G    +TRGVN++N+++ G++L GV+FQQS+VR +N     X XXXXXXXXXXXXXXXXXXX                  V+ E Y+SGAT  E   ++EG+D+++TFLRKDQ KYLCE  + KGTNPVTGVDTR+SL C
Sbjct:   68 PAFADQ--GATAASNAKITTGGASTLQSGRTIAITRGVNLDNSNFXGQNLKGVAFQQSIVRDSNFKGANXVXXXXXXXXXXXXXXXXXXXTLSNVEMAQFNRANLKNTVMKEVYVSGATLFEGVKSIEGSDWSETFLRKDQQKYLCEHPTAKGTNPVTGVDTRESLMC 233          
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match: A0A7S3L2E8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2E8_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.160e-29
Identity = 111/180 (61.67%), Postives = 135/180 (75.00%), Query Frame = 0
Query:   74 AVNSNGVLGASPVFADEDKGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPA-NVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGCP 252
            AV   G+L   P  A  D G S  S++K++ G AST   G    +TRGVN++ +D+  ++L GV+FQQS+VR + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A++ E Y+SGAT  E   ++EG+D+TDT LRKDQ KYLC   + KGTNPVTGVDTR+SL CP
Sbjct:   64 AVFLAGILALHPAMAAGDGGASVGSNAKITTGGASTLQSGRTIAITRGVNLDKSDFSNQNLKGVAFQQSIVRDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNAILKEMYVSGATLFEGVKDIEGSDWTDTELRKDQKKYLCNHPTAKGTNPVTGVDTRESLMCP 243          
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match: A0A7S1QSD0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QSD0_ALECA)

HSP 1 Score: 117 bits (294), Expect = 1.550e-28
Identity = 89/154 (57.79%), Postives = 108/154 (70.13%), Query Frame = 0
Query:  100 SKLSIGAASTG-DKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGCP 252
            SK+  G AST    G RK +TRG+N+E A+Y G+DLSGVSFQQS+VR   XXXXXXXXXXXXXXXXXXXXXXXXX                  A+ T+ Y++G T+MEP  ++GADFT T  RKDQ+ YLC++   +GTNPVT VDTR+SL CP
Sbjct:   89 SKIKAGGASTSAGLGTRKIITRGINLEKANYAGQDLSGVSFQQSIVREXXXXXXXXXXXXXXXXXXXXXXXXXXXMTQANLELARATDAIFTNAIATDMYVNGTTRMEPKRIDGADFTGTIFRKDQLNYLCKI--AEGTNPVTKVDTRESLMCP 240          
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match: A0A7S4HSJ0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSJ0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 4.320e-28
Identity = 97/213 (45.54%), Postives = 131/213 (61.50%), Query Frame = 0
Query:   40 SMSLRGNAAKCFPAILLGVALATSPLSVPLLDNHAVNSNGVLGASPVFADEDKGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPA-NVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 251
            ++  +  AA  F A+ +  A+A SP +                     A +D G S+ +++K++ G AST   G    +TRGVN++ +D+ G++L GV+FQQS+VR +NXXXXXXXXXXXXXXXXXXXXXXXXXX                 AV+ E Y+SGAT +    ++EG+D+TDT LR+DQ KYLC   + KGTNP TGVDTR+SL C
Sbjct:   61 ALKAKSAAASVFAALSIAAAVAFSPPAA-------------------IAADDTGASTAANAKITTGGASTLQSGRTIAITRGVNLDRSDFGGQNLKGVAFQQSIVRDSNXXXXXXXXXXXXXXXXXXXXXXXXXXTLANFEMAQFNRANLKNAVLREMYVSGATILTGVKDIEGSDWTDTMLRRDQTKYLCSHPTAKGTNPTTGVDTRESLMC 254          
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match: A0A7S3Y7I5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y7I5_9EUKA)

HSP 1 Score: 116 bits (291), Expect = 4.930e-28
Identity = 108/159 (67.92%), Postives = 129/159 (81.13%), Query Frame = 0
Query:   97 VSDSKLSIGAAST-GDKGARKT---VTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 251
             SDSK++ GAAST GDKG        TRGV ++ +D+ GKDLSGVSFQQS+VR TN XXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ EAYISG+T +   N++ +D+TDTF+RKDQ++YLC++ S  GTNP TGV TR+SLGC
Sbjct:   90 ASDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQIAS--GTNPTTGVGTRESLGC 246          
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match: A0A7S2TUI3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TUI3_9EUKA)

HSP 1 Score: 116 bits (291), Expect = 5.160e-28
Identity = 108/159 (67.92%), Postives = 129/159 (81.13%), Query Frame = 0
Query:   97 VSDSKLSIGAAST-GDKGARKT---VTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 251
             SDSK++ GAAST GDKG        TRGV ++ +D+ GKDLSGVSFQQS+VR TN XXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ EAYISG+T +   N++ +D+TDTF+RKDQ++YLC++ S  GTNP TGV TR+SLGC
Sbjct:   92 ASDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQIAS--GTNPTTGVGTRESLGC 248          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7U8_ECTSI1.540e-7676.53Thylakoid lumenal 15 kDa protein, chloroplast (P15... [more]
A0A835YUD1_9STRA6.540e-4366.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CVZ3_9STRA3.680e-3252.04Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1BVJ1_9STRA2.750e-3050.46Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A448ZI41_9STRA3.170e-3051.79Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S3L2E8_9STRA2.160e-2961.67Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1QSD0_ALECA1.550e-2857.79Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S4HSJ0_9STRA4.320e-2845.54Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3Y7I5_9EUKA4.930e-2867.92Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2TUI3_9EUKA5.160e-2867.92Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.100coord: 108..252
e-value: 5.8E-38
score: 131.4
NoneNo IPR availablePANTHERPTHR47200FAMILY NOT NAMEDcoord: 81..251
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..252
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 118..221
NoneNo IPR availableTMHMMTMhelixcoord: 9..31
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 162..201
e-value: 2.5E-9
score: 36.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig99contigC-linearis_contig99:294421..299210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig99.17167.1mRNA_C-linearis_contig99.17167.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig99 294361..299862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig99.17167.1 ID=prot_C-linearis_contig99.17167.1|Name=mRNA_C-linearis_contig99.17167.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=253bp
MLSTARKSVVLLFAGASVANSFVVTSPLHLSTRPPSMATSMSLRGNAAKC
FPAILLGVALATSPLSVPLLDNHAVNSNGVLGASPVFADEDKGMSSVSDS
KLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNFK
GSKLVAAGFFDADLSNCNFESANMNQANLELANLSGANMKNAVVTEAYIS
GATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLG
CP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat