prot_C-linearis_contig99.17159.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig99.17159.1
Unique Name	prot_C-linearis_contig99.17159.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	141

Homology

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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: D7G7V6_ECTSI (Acyl carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V6_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 5.710e-70
Identity = 121/143 (84.62%), Postives = 129/143 (90.21%), Query Frame = 0

Query:    1 MQRVAAAALGRAVCLGARRVGSTS-QARSLQLHNAWQ-APVAA-RQFHFSRPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            MQRVA AALGRA CL ARR GS + + RSLQLHN+WQ AP AA R FHFSRPVAGAAG++FL+KGD TARI+AVVKAFEKVDPTKVSE ALFKDDL+LDSLDAVEVVMAIEDEFTIEIPDSEADKI GIADAVAYIISHPAAK
Sbjct:    1 MQRVAVAALGRAACLTARRAGSAAARGRSLQLHNSWQQAPAAAVRHFHFSRPVAGAAGDTFLDKGDATARIIAVVKAFEKVDPTKVSENALFKDDLALDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIISHPAAK 143

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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A1E7ETX9_9STRA (Acyl carrier protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETX9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.000e-30
Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 0

Query:   54 AGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            A  +FL+ G+V+ RI  VVK F+KVD  K++ETA F +DL LDSLDAVEVVMAIEDEF IEIPD+EADKI+ +ADAV YI+SHP AK
Sbjct:   35 AASTFLDAGEVSTRIQGVVKNFDKVDQNKITETAKFTEDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKILSVADAVEYIVSHPMAK 121

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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A059LDR7_9CHLO (Acyl carrier protein n=2 Tax=unclassified Helicosporidium TaxID=2626013 RepID=A0A059LDR7_9CHLO)

HSP 1 Score: 115 bits (288), Expect = 1.790e-30
Identity = 57/91 (62.64%), Postives = 76/91 (83.52%), Query Frame = 0

Query:   50 VAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            V G A  S+L+K DVT+R+LA+VK FEKVDP KV+E+A F+ DL LDSLD VE+VMA+E+EF IEIPD+EADKI+ +++AV+Y+ S+P AK
Sbjct:   39 VRGFADSSYLDKSDVTSRVLAIVKNFEKVDPAKVTESAAFQKDLGLDSLDTVELVMALEEEFAIEIPDAEADKILSVSEAVSYVASNPLAK 129

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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A7S0UFZ0_9STRA (Acyl carrier protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFZ0_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.840e-30
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0

Query:   48 RPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            +P+   A  +FL+ G+V  RI  V+K F+KVD  KV++TA F DDL LDSLDAVEVVMAIEDEF IEIPD+EADKI+ +ADAV YI SHP AK
Sbjct:   26 QPLRTFAASTFLDSGEVAGRITGVIKNFDKVDGNKVTDTAKFTDDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKILSVADAVEYISSHPMAK 118

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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A7S1FKS7_9STRA (Acyl carrier protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FKS7_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.070e-30
Identity = 57/84 (67.86%), Postives = 72/84 (85.71%), Query Frame = 0

Query:   57 SFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            SFL+  +V++R++ VVKAF+KVDP+KV+ T+ F DDL LDSLDAVEVVMAIEDEF IEIPD+EAD+I+ + DAVAYI +HP AK
Sbjct:   52 SFLDPSEVSSRVVEVVKAFDKVDPSKVAATSKFADDLGLDSLDAVEVVMAIEDEFAIEIPDAEADRILSVEDAVAYISAHPMAK 135

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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A7S2LP29_9STRA (Acyl carrier protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LP29_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.660e-30
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 0

Query:   43 QFHFSRPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            + +FSR  AG  G SFL+ G+VT RI+ VVK F+KVDP KV  ++ F DDL LDSLD VEVVMAIEDEF IEIPD EADKI  I DA  YI +HP AK
Sbjct:   36 RLNFSRGFAG--GTSFLDAGEVTERIVQVVKNFDKVDPAKVHASSKFVDDLGLDSLDTVEVVMAIEDEFAIEIPDVEADKIASITDATEYIAAHPMAK 131

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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A7S2SKU6_9STRA (Acyl carrier protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SKU6_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.730e-29
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 0

Query:   53 AAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            AAG +FL+  +VT RI++VVK F+KVDP  V   + F+DDL LDSLD+VEVVMAIEDEF IEIPD+EADKI  IADAV YI  HP AK
Sbjct:   36 AAGSTFLDPSEVTDRIVSVVKNFDKVDPANVQPESKFEDDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIASIADAVEYIAGHPMAK 123

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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A7S2EA28_TRICV (Acyl carrier protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EA28_TRICV)

HSP 1 Score: 112 bits (281), Expect = 1.730e-29
Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 0

Query:   47 SRPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            ++PV   A  +FL   +VT RI++VVK F+KVDP KV+ T+ F +DL LDSLD+VEVVMAIEDEF IEIPD+EADKIV I DAV YI  HP AK
Sbjct:   30 AQPVRTFAASTFLSPNEVTERIVSVVKNFDKVDPGKVAPTSKFAEDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIVSIGDAVEYIAGHPMAK 123

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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A6U4LK30_9STRA (Acyl carrier protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4LK30_9STRA)

HSP 1 Score: 111 bits (278), Expect = 4.520e-29
Identity = 66/122 (54.10%), Postives = 81/122 (66.39%), Query Frame = 0

Query:   19 RVGSTSQARSLQLHNAWQAPVAARQFHFSRPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            RV   +QA  + +  A  AP+A R F            +FLEKG VT RI+ V+K F+KVD  KV+E A FK+DL LDSLDAVEVVMAIE+EF IEIPD+EAD I  + DA+ +I SHP AK
Sbjct:    9 RVLRAAQAARMPMALARPAPMAIRAF----------SSTFLEKGMVTERIMVVIKNFDKVDAGKVTEKATFKEDLGLDSLDAVEVVMAIEEEFAIEIPDAEADAIKSVEDAITFISSHPMAK 120

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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A6U6F713_9STRA (Acyl carrier protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6F713_9STRA)

HSP 1 Score: 111 bits (277), Expect = 6.980e-29
Identity = 67/126 (53.17%), Postives = 79/126 (62.70%), Query Frame = 0

Query:   15 LGARRVGSTSQARSLQLHNAWQAPVAARQFHFSRPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            L AR   S    RS    NA+ +        +S+PV   A  +FL   +VT RI+ VVK F+KVDP KV   + F +DL LDSLD+VEVVMAIEDEF IEIPD+EADKI  I DAV YI  HP AK
Sbjct:    4 LAARTAASRLAVRSTVQSNAFAS------LRYSQPVRTFAATTFLNPEEVTDRIVTVVKNFDKVDPDKVESASKFAEDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIASIEDAVEYIAGHPMAK 123

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot

BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7V6_ECTSI	5.710e-70	84.62	Acyl carrier protein n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A1E7ETX9_9STRA	1.000e-30	67.82	Acyl carrier protein n=1 Tax=Fragilariopsis cylind...	[more]
A0A059LDR7_9CHLO	1.790e-30	62.64	Acyl carrier protein n=2 Tax=unclassified Helicosp...	[more]
A0A7S0UFZ0_9STRA	1.840e-30	64.52	Acyl carrier protein n=1 Tax=Pseudo-nitzschia deli...	[more]
A0A7S1FKS7_9STRA	6.070e-30	67.86	Acyl carrier protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A7S2LP29_9STRA	7.660e-30	64.29	Acyl carrier protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A7S2SKU6_9STRA	1.730e-29	67.05	Acyl carrier protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S2EA28_TRICV	1.730e-29	63.83	Acyl carrier protein n=1 Tax=Trieres chinensis Tax...	[more]
A0A6U4LK30_9STRA	4.520e-29	54.10	Acyl carrier protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A6U6F713_9STRA	6.980e-29	53.17	Acyl carrier protein n=1 Tax=Odontella aurita TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 50..139 e-value: 1.5E-24 score: 88.0
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 62..136
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 67..133 e-value: 1.1E-8 score: 35.3
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 62..137 score: 18.893
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 64..135 e-value: 3.7E-21 score: 72.8
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 63..137 score: 16.124
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 19..140
None	No IPR available	PANTHER	PTHR20863:SF37		coord: 19..140
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..140
None	No IPR available	PRODOM	PD000887		coord: 101..136 e-value: 5.0E-7 score: 124.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig99	contig	C-linearis_contig99:242891..244809 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig99.17159.1	mRNA_C-linearis_contig99.17159.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig99 242880..245606 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig99.17159.1 ID=prot_C-linearis_contig99.17159.1|Name=mRNA_C-linearis_contig99.17159.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=141bp
MQRVAAAALGRAVCLGARRVGSTSQARSLQLHNAWQAPVAARQFHFSRPV
AGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDA
VEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036736	ACP-like_sf
IPR009081	PP-bd_ACP
IPR003231	Acyl_carrier