mRNA_C-linearis_contig99.17159.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig99.17159.1
Unique NamemRNA_C-linearis_contig99.17159.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: D7G7V6_ECTSI (Acyl carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V6_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 2.790e-66
Identity = 121/143 (84.62%), Postives = 129/143 (90.21%), Query Frame = 3 
Query:   12 MQRVAAAALGRAVCLGARRVGSTS-QARSLQLHNAWQ-APVAA-RQFHFSRPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 431
            MQRVA AALGRA CL ARR GS + + RSLQLHN+WQ AP AA R FHFSRPVAGAAG++FL+KGD TARI+AVVKAFEKVDPTKVSE ALFKDDL+LDSLDAVEVVMAIEDEFTIEIPDSEADKI GIADAVAYIISHPAAK
Sbjct:    1 MQRVAVAALGRAACLTARRAGSAAARGRSLQLHNSWQQAPAAAVRHFHFSRPVAGAAGDTFLDKGDATARIIAVVKAFEKVDPTKVSENALFKDDLALDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIISHPAAK 143
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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A1E7ETX9_9STRA (Acyl carrier protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETX9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 6.170e-28
Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 3 
Query:  171 AGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 431
            A  +FL+ G+V+ RI  VVK F+KVD  K++ETA F +DL LDSLDAVEVVMAIEDEF IEIPD+EADKI+ +ADAV YI+SHP AK
Sbjct:   35 AASTFLDAGEVSTRIQGVVKNFDKVDQNKITETAKFTEDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKILSVADAVEYIVSHPMAK 121
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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A059LDR7_9CHLO (Acyl carrier protein n=2 Tax=unclassified Helicosporidium TaxID=2626013 RepID=A0A059LDR7_9CHLO)

HSP 1 Score: 115 bits (289), Expect = 1.090e-27
Identity = 57/91 (62.64%), Postives = 76/91 (83.52%), Query Frame = 3 
Query:  159 VAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 431
            V G A  S+L+K DVT+R+LA+VK FEKVDP KV+E+A F+ DL LDSLD VE+VMA+E+EF IEIPD+EADKI+ +++AV+Y+ S+P AK
Sbjct:   39 VRGFADSSYLDKSDVTSRVLAIVKNFEKVDPAKVTESAAFQKDLGLDSLDTVELVMALEEEFAIEIPDAEADKILSVSEAVSYVASNPLAK 129
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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A7S0UFZ0_9STRA (Acyl carrier protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFZ0_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.100e-27
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 3 
Query:  153 RPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 431
            +P+   A  +FL+ G+V  RI  V+K F+KVD  KV++TA F DDL LDSLDAVEVVMAIEDEF IEIPD+EADKI+ +ADAV YI SHP AK
Sbjct:   26 QPLRTFAASTFLDSGEVAGRITGVIKNFDKVDGNKVTDTAKFTDDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKILSVADAVEYISSHPMAK 118
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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A7S1FKS7_9STRA (Acyl carrier protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FKS7_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.500e-27
Identity = 57/84 (67.86%), Postives = 72/84 (85.71%), Query Frame = 3 
Query:  180 SFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 431
            SFL+  +V++R++ VVKAF+KVDP+KV+ T+ F DDL LDSLDAVEVVMAIEDEF IEIPD+EAD+I+ + DAVAYI +HP AK
Sbjct:   52 SFLDPSEVSSRVVEVVKAFDKVDPSKVAATSKFADDLGLDSLDAVEVVMAIEDEFAIEIPDAEADRILSVEDAVAYISAHPMAK 135
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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A7S2LP29_9STRA (Acyl carrier protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LP29_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.340e-27
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 3 
Query:  138 QFHFSRPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 431
            + +FSR  AG  G SFL+ G+VT RI+ VVK F+KVDP KV  ++ F DDL LDSLD VEVVMAIEDEF IEIPD EADKI  I DA  YI +HP AK
Sbjct:   36 RLNFSRGFAG--GTSFLDAGEVTERIVQVVKNFDKVDPAKVHASSKFVDDLGLDSLDTVEVVMAIEDEFAIEIPDVEADKIASITDATEYIAAHPMAK 131
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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A7S2SKU6_9STRA (Acyl carrier protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SKU6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 9.290e-27
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 3 
Query:  168 AAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 431
            AAG +FL+  +VT RI++VVK F+KVDP  V   + F+DDL LDSLD+VEVVMAIEDEF IEIPD+EADKI  IADAV YI  HP AK
Sbjct:   36 AAGSTFLDPSEVTDRIVSVVKNFDKVDPANVQPESKFEDDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIASIADAVEYIAGHPMAK 123
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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A7S2EA28_TRICV (Acyl carrier protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EA28_TRICV)

HSP 1 Score: 113 bits (282), Expect = 9.290e-27
Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 3 
Query:  150 SRPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 431
            ++PV   A  +FL   +VT RI++VVK F+KVDP KV+ T+ F +DL LDSLD+VEVVMAIEDEF IEIPD+EADKIV I DAV YI  HP AK
Sbjct:   30 AQPVRTFAASTFLSPNEVTERIVSVVKNFDKVDPGKVAPTSKFAEDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIVSIGDAVEYIAGHPMAK 123
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BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A6U4LK30_9STRA (Acyl carrier protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4LK30_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.300e-26
Identity = 66/122 (54.10%), Postives = 81/122 (66.39%), Query Frame = 3 
Query:   66 RVGSTSQARSLQLHNAWQAPVAARQFHFSRPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 431
            RV   +QA  + +  A  AP+A R F            +FLEKG VT RI+ V+K F+KVD  KV+E A FK+DL LDSLDAVEVVMAIE+EF IEIPD+EAD I  + DA+ +I SHP AK
Sbjct:    9 RVLRAAQAARMPMALARPAPMAIRAF----------SSTFLEKGMVTERIMVVIKNFDKVDAGKVTEKATFKEDLGLDSLDAVEVVMAIEEEFAIEIPDAEADAIKSVEDAITFISSHPMAK 120
[Close]
BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Match: A0A6U6F713_9STRA (Acyl carrier protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6F713_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.510e-26
Identity = 67/126 (53.17%), Postives = 79/126 (62.70%), Query Frame = 3 
Query:   54 LGARRVGSTSQARSLQLHNAWQAPVAARQFHFSRPVAGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 431
            L AR   S    RS    NA+ +        +S+PV   A  +FL   +VT RI+ VVK F+KVDP KV   + F +DL LDSLD+VEVVMAIEDEF IEIPD+EADKI  I DAV YI  HP AK
Sbjct:    4 LAARTAASRLAVRSTVQSNAFAS------LRYSQPVRTFAATTFLNPEEVTDRIVTVVKNFDKVDPDKVESASKFAEDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIASIEDAVEYIAGHPMAK 123
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7V6_ECTSI2.790e-6684.62Acyl carrier protein n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A1E7ETX9_9STRA6.170e-2867.82Acyl carrier protein n=1 Tax=Fragilariopsis cylind... [more]
A0A059LDR7_9CHLO1.090e-2762.64Acyl carrier protein n=2 Tax=unclassified Helicosp... [more]
A0A7S0UFZ0_9STRA1.100e-2764.52Acyl carrier protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S1FKS7_9STRA3.500e-2767.86Acyl carrier protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2LP29_9STRA4.340e-2764.29Acyl carrier protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2SKU6_9STRA9.290e-2767.05Acyl carrier protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2EA28_TRICV9.290e-2763.83Acyl carrier protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U4LK30_9STRA2.300e-2654.10Acyl carrier protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U6F713_9STRA2.510e-2653.17Acyl carrier protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig99contigC-linearis_contig99:242880..245606 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score217.6
Seed ortholog evalue3.7e-54
Seed eggNOG ortholog2880.D7G7V6
KEGG koko:K03955
KEGG TC3.D.1.6
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00146
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.acyl binding
EggNOG OGsCOG0236@1,KOG1748@2759
Ec32 ortholog descriptionAcyl carrier protein
Ec32 orthologEc-06_000160.1
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Exons3
Model size1231
Cds size423
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig99.17159.1prot_C-linearis_contig99.17159.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig99 242891..244809 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930848.00784-UTR-C-linearis_contig99:242879..2428901622930848.00784-UTR-C-linearis_contig99:242879..242890Chordaria linearis ClinC8C monoicousUTRC-linearis_contig99 242880..242890 +
1690881280.6035814-UTR-C-linearis_contig99:242879..2428901690881280.6035814-UTR-C-linearis_contig99:242879..242890Chordaria linearis ClinC8C monoicousUTRC-linearis_contig99 242880..242890 +
1622930848.0844386-UTR-C-linearis_contig99:244809..2456061622930848.0844386-UTR-C-linearis_contig99:244809..245606Chordaria linearis ClinC8C monoicousUTRC-linearis_contig99 244810..245606 +
1690881280.6478932-UTR-C-linearis_contig99:244809..2456061690881280.6478932-UTR-C-linearis_contig99:244809..245606Chordaria linearis ClinC8C monoicousUTRC-linearis_contig99 244810..245606 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930848.0233498-CDS-C-linearis_contig99:242890..2430581622930848.0233498-CDS-C-linearis_contig99:242890..243058Chordaria linearis ClinC8C monoicousCDSC-linearis_contig99 242891..243058 +
1690881280.6179478-CDS-C-linearis_contig99:242890..2430581690881280.6179478-CDS-C-linearis_contig99:242890..243058Chordaria linearis ClinC8C monoicousCDSC-linearis_contig99 242891..243058 +
1622930848.0473626-CDS-C-linearis_contig99:243972..2440351622930848.0473626-CDS-C-linearis_contig99:243972..244035Chordaria linearis ClinC8C monoicousCDSC-linearis_contig99 243973..244035 +
1690881280.6286452-CDS-C-linearis_contig99:243972..2440351690881280.6286452-CDS-C-linearis_contig99:243972..244035Chordaria linearis ClinC8C monoicousCDSC-linearis_contig99 243973..244035 +
1622930848.064174-CDS-C-linearis_contig99:244617..2448091622930848.064174-CDS-C-linearis_contig99:244617..244809Chordaria linearis ClinC8C monoicousCDSC-linearis_contig99 244618..244809 +
1690881280.6382542-CDS-C-linearis_contig99:244617..2448091690881280.6382542-CDS-C-linearis_contig99:244617..244809Chordaria linearis ClinC8C monoicousCDSC-linearis_contig99 244618..244809 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig99.17159.1

>prot_C-linearis_contig99.17159.1 ID=prot_C-linearis_contig99.17159.1|Name=mRNA_C-linearis_contig99.17159.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=141bp
MQRVAAAALGRAVCLGARRVGSTSQARSLQLHNAWQAPVAARQFHFSRPV
AGAAGESFLEKGDVTARILAVVKAFEKVDPTKVSETALFKDDLSLDSLDA
VEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK*
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mRNA from alignment at C-linearis_contig99:242880..245606+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig99.17159.1 ID=mRNA_C-linearis_contig99.17159.1|Name=mRNA_C-linearis_contig99.17159.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2727bp|location=Sequence derived from alignment at C-linearis_contig99:242880..245606+ (Chordaria linearis ClinC8C monoicous)
ACCAACTGACAATGCAGCGCGTGGCAGCAGCAGCTCTGGGGCGGGCAGTG
TGCCTAGGTGCACGGCGGGTGGGATCGACCTCGCAGGCACGGTCTTTGCA
GCTTCACAACGCATGGCAGGCGCCGGTTGCCGCGAGGCAGTTCCACTTCT
CTAGGCCTGTCGCAGGCGCCGCAGGAGAGGTGAGAGAGAGAGAGAGAGAG
CGTGCAAGGAAGCCAAAGACGGCAACGAGAGTGATATGGTAGAGAGTGTG
CTGTTGCAAAGCGTGGCTTTCACCAGCAGGTTGTGGCGGCGAAGGTTGAG
ATCGCCAGGAGTGGACTCCTGACTCCGAGGCCTCCTGAAACAAACCAAAC
AAACCGCTCCTGTTTCGGAACCTACTGCTTTACATGCCTGCAAAGAATCA
GGACTCTCTCACGTGTTGCGGGGCATACAGCATATAACATGGGGTGCGGC
TTGGCTTGGCGGGACGTTCGCTGACAGCAGGGTTCGACAGAGGATTCATT
GGTGGCTCTTTCTCGTGCAATAGCAAGGATTGGCCGATCACGATTGTACA
TGCCGCGTTCGCTCTTTAGATGAGCAAAAACCACGGCGCTATATGACTGT
ACCCACTGCCATCGTCGGCGTGAGCTCGCCGCTTGTGTGCATGAGACTAC
ATAGACAGGAGCGAACGTTGAGCACGGAAGATCGGACGCTACGATGTTGT
GGTGCCTAATATAGTTAACGGCAGCCTTAGGATGTTATGGCGGTCAAGGT
TTGGGTTGTGCTTGTAGCGGTTGCGTGATGCATCAGTACCCACAACACAA
GTTCTATAAGTTTGTACTCGGAGTACGTAGTCTACCGTGTACGAACAGCA
GTGGGGCACGCCAATCCACACCGCCTCTCCCGTGGCATTTTGCCTACAAG
TGACCTTGTGTGTTCATGTGTCAAAATACTTCTACCGCGGAATAAGCTGG
GTCATCCAACGAACAAGTTGGATTTCGGCTGCGCGATGAAAAATTGACGT
TCCTCAACACTAACCTTCCGCCTTCGCGTGGTGGTGCTGGTGTGCTTCTG
TGCTCGGATGTTGGCATTGCATTGCATTGTGATTGCACTGCAGTCGTTTT
TGGAGAAGGGGGACGTCACAGCTCGAATCCTGGCCGTCGTGAAGGCCTTT
GAGAAGGTGAGGAAGAGGTGGCACATGCTGCTGGCTAATCAATTTAAATG
GTAGGAGAGACACCGGAGATGAGCCCGCCGCCTCAACCCTCTCGATGAGT
ACTCTGTCCACCGGTAGCAACCCTTGTGTTGAAGGCCTTGCCCAGCGAGC
CAACTGCTTCATCTTGAGGTGTATAAATTGCCAAGTTGGGCACCACATAT
GACCGGAAGAAACGGTGCATGTTAAAATTGATTTGTGTTGGTAGACGGCA
AGTAGGTTTGTTGTTACTTTCCTTGCATCCGTTTTTTGTGTGTATTTCTG
GAGGTCTTGGTCCTAAACGTGGAGTGTGTGCCGTACAGGTGGGACTCGTG
TATCTGTATCTGAGAAAATTATTCCTTCGTGTGTGCCGGGTATTACCTTT
TGCAATCCACACTGCTGTATGTACGTATTTACCCCTGCAAAGGGCGGGCC
AGTTCACGTACTTTGTATCTTTGTATTTGTATTTGTATTTTTGAAGTCGA
TAAACGATACATAAGTGTGCCGCTCTCGGCGATTTCTATTGTCCGGTACT
TTAAGCATGAACATGTAAACATGTCATGGCATGAACAGGTGGACCCGACC
AAGGTTTCTGAGACGGCGTTGTTCAAGGACGACTTGTCGCTCGACTCCCT
GGACGCTGTAGAAGTGGTGATGGCCATCGAGGACGAGTTCACCATCGAGA
TCCCAGACTCAGAGGCAGACAAGATCGTGGGCATCGCTGACGCGGTAGCC
TACATCATCTCGCACCCCGCCGCCAAATAACAAATGTAAAGCATGCTTGC
CTTGCTAAGGCAGGCCTAAGCTTTTGAGGGAGGAGGAGGGACGAGAGAGG
CTGCAAACTGGTGCGGCAGCAGACGTATTTGAGTGGATCAGAGAGCCATG
TTCTGGCTTGGGGGCGGCGGCGAGGGCTGGACCACGGTTGATGTGGAGTT
TTTATTTTGACCGCCTGGTGTGCTTTGCACGCCGCGTACACCCTTGCGCT
CGGAAAACATCGGAAATCCTAATTTACGAGTGACTGCCCGCGCCAGCGGT
GCGCGTTTCAATCTCGGTGGTGCAGTGGTGTTGGCCACACTGCGATATTC
CTATTTCGCATGTTATCTTTGATTCGTGTGGGTGCACGTTTCGTTCAAGC
GTTGGTTTGCGAACTGCAGGGTATTTTGAAGTATTTTGGAAGCGAGTTAA
GTCTTACTTTCGACCATGTATTTCTCCTTTTCCTGATTTGCGTCACTTGT
CACCAACGTTGGCTTCCGCGTGTTTTCTGGGGCCAATTGGGCGCACGGTA
CCATGGTGCTCCGGAATCTCCGTGGGTAAAGTGTTGGTATGCTGCGCTTC
AAAAGGCTACAATGGGTGACAGATGATGGTAATGGAAACCACGTTGTGTC
GCAACGATTGGGGACATGTGCGAGTGTTGCGCAAAGCAGAAAAAAATACC
GTATTGTACTTGGATTGGAAACGCGTCCGGCAATGGCTTACTGCTCCGTG
GTTGTAGTACCCAATTATTCTTGTTCGTTCGCCATCTGGTTCAGTGCTTC
AAGGCACAACACGACACGACACGACCC
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Coding sequence (CDS) from alignment at C-linearis_contig99:242880..245606+

>mRNA_C-linearis_contig99.17159.1 ID=mRNA_C-linearis_contig99.17159.1|Name=mRNA_C-linearis_contig99.17159.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=846bp|location=Sequence derived from alignment at C-linearis_contig99:242880..245606+ (Chordaria linearis ClinC8C monoicous)
ATGCAGCGCGTGGCAGCAGCAGCTCTGGGGCGGGCAGTGTGCCTAGGTGC
ACGGCGGGTGGGATCGACCTCGCAGGCACGGTCTTTGCAGCTTCACAACG
CATGGCAGGCGCCGGTTGCCGCGAGGCAGTTCCACTTCTCTAGGCCTGTC
GCAGGCGCCGCAGGAGAGATGCAGCGCGTGGCAGCAGCAGCTCTGGGGCG
GGCAGTGTGCCTAGGTGCACGGCGGGTGGGATCGACCTCGCAGGCACGGT
CTTTGCAGCTTCACAACGCATGGCAGGCGCCGGTTGCCGCGAGGCAGTTC
CACTTCTCTAGGCCTGTCGCAGGCGCCGCAGGAGAGTCGTTTTTGGAGAA
GGGGGACGTCACAGCTCGAATCCTGGCCGTCGTGAAGGCCTTTGAGAAGT
CGTTTTTGGAGAAGGGGGACGTCACAGCTCGAATCCTGGCCGTCGTGAAG
GCCTTTGAGAAGGTGGACCCGACCAAGGTTTCTGAGACGGCGTTGTTCAA
GGACGACTTGTCGCTCGACTCCCTGGACGCTGTAGAAGTGGTGATGGCCA
TCGAGGACGAGTTCACCATCGAGATCCCAGACTCAGAGGCAGACAAGATC
GTGGGCATCGCTGACGCGGTAGCCTACATCATCTCGCACCCCGCCGCCAA
ATAAGTGGACCCGACCAAGGTTTCTGAGACGGCGTTGTTCAAGGACGACT
TGTCGCTCGACTCCCTGGACGCTGTAGAAGTGGTGATGGCCATCGAGGAC
GAGTTCACCATCGAGATCCCAGACTCAGAGGCAGACAAGATCGTGGGCAT
CGCTGACGCGGTAGCCTACATCATCTCGCACCCCGCCGCCAAATAA
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