prot_C-linearis_contig99.17155.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig99.17155.1
Unique Nameprot_C-linearis_contig99.17155.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1506
Homology
BLAST of mRNA_C-linearis_contig99.17155.1 vs. uniprot
Match: D7G7W0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7W0_ECTSI)

HSP 1 Score: 535 bits (1379), Expect = 4.970e-162
Identity = 560/1608 (34.83%), Postives = 682/1608 (42.41%), Query Frame = 0
Query:    1 MDIEEIDGNSSQEDRPPXXXXXXXXXXRPKSXXXXXXXXXXTQSPAIASVASGSSTLIRFLGPAGSPSLSAWEDVNRQCPVCQQTGFSSRSLALHVNKCLDVGSNAGAGVADEAGEAAAVGAKETAKKRVGNAGGRNAATAGAARXXXXXXXXTSNASHAAGAGSLEGEGVARTTPQAVPSKSKSPTSNG--------KAAKKLKTQQDGREAASERQGPGS---------DHATDKARSGTNS-----LQPSFAGSKPAGLAQQXXXXXXXXXXXXXXXTPLRRRGLGLARPPRVHPTGSDTAPTTNAAAAVSRVPNGSDERALNEIARAQLSYVLEASVNMPASAPQAGGWLGTQLFPKPGAEDSLKDGQCADCCCDRTARGQGACLAKCGASARVWAAGRGGKKIAANENSRVRPRPASWGACPSRSSGRRGWLEIWP--GDVDGGNDDDCWGDGDGYVTLRPFPSAAEPKATPXXXXXXXXXXXXXXXXXXXXXXXXXXSSLVVQAGGGPSLSSKGQKQGSSPAPTSRADRFLQVFARLQPARSALNLHESPPPSSKEKPKAKASEARHAEVEGAGARLRSRVAGDGGVNXXXXXXXXXXXXXXXGRQDVVSPGRKDSMTASVAVEFGEGEAKAGAGGTAGSCEVRGVGILATPSPKRDALGTLTLPSAGVSDAVGQRSSANINIVPDRSR-----AASSSSSPH-----------------CNSLGTSSTSVKSNSSVNKVRRK-ESRKPPSPTPTPAMPPTYTPQVGEPRGTGCLANSPLANTKGSVKQKSLLEAAPSVPPTSTSTPHLSG-------------------------------------------AMSVENVAIGMTKRPKPASVARTELNTAARGGGEPLPRDGSSRTSGRMIGRLTGASVTAKRSSAARDSDKREETLXXXXXXXXXXXXXXXXXXXXXXXPDAKHAAPVSSRWGAPRSRGALACRASSGLLRSADHAASPSXXXXXXXXXXXXXXXXXXXXASDRFVESSVSDXXXXXXXXXXXXXXXPFQGRKADVPQKGSLTVVCDHGATLRSSWSIDDSQEVGRLLFGASLGYDAVWYLDPADEDCVGVRRYRILPHPLLAPTGGWISERGRLRDDPYTIIKAIPSPTTKSXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXPAQAPLGRRHPAA-PYQRQQQQHRRQQHGNLGNEGLPKST---PTQGSNPSTNTSXNAGRRRGRG-------SSWYPSGESHDERASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKVFALPGAAPAKGRGSLHVGGATSPPAKALEASDTGDKVTCPVCNRGMDHCKPGQRQQHVHTCLLKQSSSTKKAPXXXKTPATAPVTPTPQTPGSAVGVGAGGSGYGNMARSSVEETGPFAFGQGRKGREAPGP---------SSAS--DADAGAADSPRSTRVSLQGVFSPKPARRSPKTGDIPIQLEHRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSGVGTKTNGFRGSTGTAEVRVPASKSTVAPKAKGPAECPVCQLHFGGRLGDWERQQHIKQCLES 1496
            MD EEID NSSQE   P          R K+            SPA+A     SSTL RFLGPAG PS SAW+DVNRQCPVCQQTGFSSRSLALHVN CL+  + A     D +   +A G ++ A   VGN  GRN ATA            +S  +   G+GS EG    R + +  P KSK+    G        KAAKK KT Q  R   +ER    +         + A DK +S T +     L  S   S P G  Q                 PLRRR LGLARP + H   SD  PT  AA+  SR   G D RAL+EIA+AQL Y+ EAS   PA     GGWLGT+LFP P  E    D    DC C  T  G+GA  + CG    V   G G       EN RVR RPASWGA P+    + GW   WP  G VD G  D CWGDGDGY+TL+ FP    P  T                           + + V A     L  +G     SPAP+SR DRFLQVF+RLQPAR AL LHE  PP+    P+       +A+V+  G R           N               G Q    PG   +M  SV  E G G   +   GTA SCE   V  L  P PKR AL T++  SA  +    +R  A I   P +S      A+  S S H                  N  G   +        N+   +  SRK   P PT     T+  Q     G     ++P  N+   VK  + +   P+      ++                                                A++ EN+ IG   R + A V R  ++    G  +P PR GSS  S  +   + GA+V  KR+S++ + + R  ++                       P  + A P SS+W   RSRGALA RASSGLLRSAD AA                       A+D  V+ + S+                 +GRKADV QKGSLTVV +HGATLR SWSID S E+GRL FGA L YDAVWYL PAD DCVGV RY ++PHP LAPTGGWIS  GRLRDDPY I+KA  +P+ +                                  +   G+R P   P+  Q         G +G EGL KST      G   +  +  +AGR RG           + P+ ESH +R S                                       S+V  LP A  A G   L    ATSP AKALEA+D+GDKVTCPVCNRGMDH K GQRQQHVH CL+KQ SS KK      T      TP+   P             G   RSS++  G    G+    R    P         SSA+  +  +G ++ PRS+RVSLQGVFSPKPA                RD                                               TN    S GTA               KG  ECPVC + FGGR G WERQ H++QCL+S
Sbjct:    2 MDAEEIDDNSSQEANLPPATLTLATKKRTKTKK---------DSPAVAP----SSTLTRFLGPAGPPSRSAWDDVNRQCPVCQQTGFSSRSLALHVNDCLERRARA-----DASDSESAAGGRKDAAGGVGNPDGRNTATA-----TTVGNEASSAVTDVTGSGSREGN-TRRMSREGTP-KSKAVHGRGGEKQVRQDKAAKKTKTLQGERAIDTERAASATSKARVSHTRNQAADKTKSNTRAALQHRLPNSTQSSSPDGSQQP---------------NPLRRRALGLARP-KGHQIVSDAMPTPAAASNASRARKGCDSRALDEIAQAQLLYLREASARGPA---HGGGWLGTKLFPAPDEEGESADDGSMDCWCVGTGGGEGAYRSSCG----VGECGTGRNTRMRKENRRVRGRPASWGARPNDE--QWGWFGTWPAGGSVDDGGVD-CWGDGDGYLTLKAFP----PPET-------------LVESDGEDERDGGGAVMPVDAARSMRLGEEG-----SPAPSSRVDRFLQVFSRLQPARRALRLHE--PPTPXXXPQDSGDNRANAKVKNVGTRSPPTAVAPTNKNTVASSS---------GPQQAERPGGSPTMRPSVEREPG-GAGNSARTGTARSCEGERVRELTMPPPKRTALETISEVSANNN----RRPGATIASSPVQSTSPAIIASFKSVSGHKISRKQPPQEPPQQRKPANRSGEEGSRRHEQEDRNRTSSEGSSRKLSLPAPTVRRTSTFEVQACS-GGVENSVSAPKGNSPRVVKTPAKIYGPPNESAADAASQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTRRPVAVANENLTIGE-HRKRTAHVDRAPVDATTHGVPQPPPRHGSSTGSDEVKRSMPGATVAKKRASSSHERNVRVSSMDAGGHRRSQRDPP----------PGLQRAIPTSSQWNGSRSRGALASRASSGLLRSADLAARSENQRKENENAKVAPA------ANDGVVDLAGSNSSQLEEC----------EGRKADVRQKGSLTVVWEHGATLRDSWSIDSSHELGRLAFGALLDYDAVWYLSPADTDCVGVLRYSVVPHPRLAPTGGWISGSGRLRDDPYIIVKAEAAPSIRPSKAASRDRGD----------------------GRGGSGQRQPNLDPHHHQ---------GRVGVEGLTKSTHGAADGGYTAAAPSRGHAGRSRGTNXXXXXXAERYEPAEESHSDRVSAGPTAEGGRRTQPQTP-----------------------SRV--LPKAVSAGGSFGL----ATSPSAKALEANDSGDKVTCPVCNRGMDHWKSGQRQQHVHACLMKQPSSAKK------TRLAGDATPSASRPS------------GITHRSSLQFDGSSDPGESTTPRPERRPGVRRTEGTGSSANRQEGPSGPSEGPRSSRVSLQGVFSPKPA----------------RDPDG--------------------------------------------TNTVSASRGTAPXXXXXXXXXXX-XXKGLTECPVCGVSFGGRQGQWERQAHVQQCLDS 1353          
BLAST of mRNA_C-linearis_contig99.17155.1 vs. uniprot
Match: A0A7S4J0S2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J0S2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 8.710e-6
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 0
Query:  966 PQKGSLTVVCDHGATLRSSWSIDDSQ-EVGRLLFGASLGYDAVWYLDPA---------DEDCVGVRRYRILPHPLLAPT---------GGWISERGRLRDDPYTIIK 1053
            P  G++ +V + GAT+R  + ID+++  +G+L  G    Y    +L P          D++C+GV RY+I+  P+   T          GWIS+RGRL+ +PY I+K
Sbjct:  374 PVLGTVRIVSEKGATIREIFDIDEAKLSLGKLKHGDVRQYVEKRFLPPPEDEDEFDNDDDECIGVYRYKIILKPVDKETVDSELDHFNHGWISDRGRLKCEPYKILK 480          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7W0_ECTSI4.970e-16234.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4J0S2_9STRA8.710e-633.64Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig99contigC-linearis_contig99:226406..233880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig99.17155.1mRNA_C-linearis_contig99.17155.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig99 226406..234019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig99.17155.1 ID=prot_C-linearis_contig99.17155.1|Name=mRNA_C-linearis_contig99.17155.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1506bp
MDIEEIDGNSSQEDRPPPTTTTATTKKRPKSKSKSKSKSKETQSPAIASV
ASGSSTLIRFLGPAGSPSLSAWEDVNRQCPVCQQTGFSSRSLALHVNKCL
DVGSNAGAGVADEAGEAAAVGAKETAKKRVGNAGGRNAATAGAARRAGNV
GARTSNASHAAGAGSLEGEGVARTTPQAVPSKSKSPTSNGKAAKKLKTQQ
DGREAASERQGPGSDHATDKARSGTNSLQPSFAGSKPAGLAQQQQQQQQQ
QQQQQQQPTPLRRRGLGLARPPRVHPTGSDTAPTTNAAAAVSRVPNGSDE
RALNEIARAQLSYVLEASVNMPASAPQAGGWLGTQLFPKPGAEDSLKDGQ
CADCCCDRTARGQGACLAKCGASARVWAAGRGGKKIAANENSRVRPRPAS
WGACPSRSSGRRGWLEIWPGDVDGGNDDDCWGDGDGYVTLRPFPSAAEPK
ATPTPTREDAESEDAGVGGGSGDGEGSGNSSLVVQAGGGPSLSSKGQKQG
SSPAPTSRADRFLQVFARLQPARSALNLHESPPPSSKEKPKAKASEARHA
EVEGAGARLRSRVAGDGGVNGGGNAGDGGGDGDCDGRQDVVSPGRKDSMT
ASVAVEFGEGEAKAGAGGTAGSCEVRGVGILATPSPKRDALGTLTLPSAG
VSDAVGQRSSANINIVPDRSRAASSSSSPHCNSLGTSSTSVKSNSSVNKV
RRKESRKPPSPTPTPAMPPTYTPQVGEPRGTGCLANSPLANTKGSVKQKS
LLEAAPSVPPTSTSTPHLSGAMSVENVAIGMTKRPKPASVARTELNTAAR
GGGEPLPRDGSSRTSGRMIGRLTGASVTAKRSSAARDSDKREETLTLTST
ADEGCEAEAQAQARPRPPPDAKHAAPVSSRWGAPRSRGALACRASSGLLR
SADHAASPSAAPSASASASGGAEPKLTPAASDRFVESSVSDTSQQEREQE
QEQEQEPFQGRKADVPQKGSLTVVCDHGATLRSSWSIDDSQEVGRLLFGA
SLGYDAVWYLDPADEDCVGVRRYRILPHPLLAPTGGWISERGRLRDDPYT
IIKAIPSPTTKSSSSSSSSSWSHTASSDRLSRPQIQTQTQTQTPAQAPLG
RRHPAAPYQRQQQQHRRQQHGNLGNEGLPKSTPTQGSNPSTNTSTNAGRR
RGRGSSWYPSGESHDERASASATATAPSPSSPSSSKVGGGRRTAPQPRTA
SASASASASKVFALPGAAPAKGRGSLHVGGATSPPAKALEASDTGDKVTC
PVCNRGMDHCKPGQRQQHVHTCLLKQSSSTKKAPPPPKTPATAPVTPTPQ
TPGSAVGVGAGGSGYGNMARSSVEETGPFAFGQGRKGREAPGPSSASDAD
AGAADSPRSTRVSLQGVFSPKPARRSPKTGDIPIQLEHRRDRDRDSDRDR
DTSSRGPSSSSSAASPRTEAVTPTPTPTPNRKSGVGTKTNGFRGSTGTAE
VRVPASKSTVAPKAKGPAECPVCQLHFGGRLGDWERQQHIKQCLESLDGV
FDSEE*
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