prot_C-linearis_contig99.17152.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig99.17152.1
Unique Name	prot_C-linearis_contig99.17152.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	190

Homology

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BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Match: A0A6H5L318_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L318_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 1.350e-82
Identity = 142/195 (72.82%), Postives = 153/195 (78.46%), Query Frame = 0

Query:    1 MGWRCRL--GRRAMSSSRFLLLLLAVLRTRSGVAFT---AVGRQR-ISNGMGKAGRLHCSSKGAYPASLRRSRGGSGGLSMDARSCAPEITDDTFEAEVLDEERPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAELKIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHMDL 189
            + W CRL  GR A  +   LLLLLA      GV+F     + RQR  S G+G+ GRL  SSKGAYP   RR RG   GL MDA SCAPEITDD+FEAEVLDE+RPVLVFFRAPWCGPCRMVGPIVDEVIA+HG    KLKVLELCTDENPKTVAE KIRNIPTLMLF++RKSVMTVVGAVPKSALVSSIKKHMDL
Sbjct:    4 LSWGCRLIAGRTAGEACSVLLLLLAC--ATPGVSFIQGRGMARQRTFSYGVGRIGRLQASSKGAYPPPSRRLRGR--GLCMDASSCAPEITDDSFEAEVLDEDRPVLVFFRAPWCGPCRMVGPIVDEVIADHGS---KLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 191

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BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Match: D7G7W3_ECTSI (Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W3_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 5.680e-69
Identity = 105/115 (91.30%), Postives = 110/115 (95.65%), Query Frame = 0

Query:   75 MDARSCAPEITDDTFEAEVLDEERPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAELKIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHMDL 189
            MDARSCAPEITDD+FEAEVLDE+RPVLVFFRA WCGPCRMVGPIVDEVIA+HGG   KLKVLELCTDENPKTVAE KIRNIPTLMLF++RKSVMTVVGAVPKSALVSSIKKHMDL
Sbjct:    1 MDARSCAPEITDDSFEAEVLDEDRPVLVFFRAAWCGPCRMVGPIVDEVIADHGG---KLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 112

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BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Match: A0A524RKQ5_9CYAN (Thioredoxin n=2 Tax=Aphanocapsa feldmannii TaxID=192050 RepID=A0A524RKQ5_9CYAN)

HSP 1 Score: 126 bits (316), Expect = 2.910e-34
Identity = 62/109 (56.88%), Postives = 79/109 (72.48%), Query Frame = 0

Query:   79 SCAPEITDDTFEAEVLDEERPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAELKIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHM 187
            S A  +TDD+FE EVL  + PVL+ F APWCGPCRMV PIVDE+ +E  G   ++KV++L TDENP   ++  IR+IPTLMLF   + V TVVGAVPK+ L S+I KH+
Sbjct:    2 SSAAAVTDDSFEVEVLKSDIPVLIDFWAPWCGPCRMVAPIVDEIASEFAG---RIKVVKLNTDENPNVASQYGIRSIPTLMLFKAGQRVDTVVGAVPKNTLSSTITKHL 107

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BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Match: A0A6B1A1K2_9SYNE (Thioredoxin n=16 Tax=Synechococcus TaxID=1129 RepID=A0A6B1A1K2_9SYNE)

HSP 1 Score: 124 bits (312), Expect = 1.170e-33
Identity = 63/109 (57.80%), Postives = 80/109 (73.39%), Query Frame = 0

Query:   79 SCAPEITDDTFEAEVLDEERPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAELKIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHM 187
            S A  +TD +FEA+VL  E PVLV F APWCGPCRMV PI+DE+ AE     GK+KV++L TDENP    +L IR+IPTLM+F + + V TVVGAVPK+ L S+I K++
Sbjct:    2 SNAAPVTDASFEADVLKSEVPVLVDFWAPWCGPCRMVAPIIDEIAAE---LDGKIKVVKLNTDENPSVAGQLGIRSIPTLMVFKDGQRVDTVVGAVPKTTLSSTIAKYL 107

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BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Match: B1X5G8_PAUCH (Thioredoxin n=1 Tax=Paulinella chromatophora TaxID=39717 RepID=B1X5G8_PAUCH)

HSP 1 Score: 124 bits (312), Expect = 1.320e-33
Identity = 63/113 (55.75%), Postives = 79/113 (69.91%), Query Frame = 0

Query:   75 MDARSCAPEITDDTFEAEVLDEERPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAELKIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHM 187
            M+  S A ++TD +FE E+L    PVLV F APWCGPCRM+ PIVDE+  E  G   KLKV +L TDENP   ++  IR+IPTLM+F E + V TVVGAVPKS L  +I+KH+
Sbjct:    1 MEKMSSAADVTDASFETEILMSNIPVLVDFWAPWCGPCRMLAPIVDEIAKEFEG---KLKVFKLNTDENPTIASQYGIRSIPTLMIFNEGQKVDTVVGAVPKSTLSVTIEKHV 110

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BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Match: A0A4D6BL56_9FLOR (Thioredoxin n=1 Tax=Balbiania investiens TaxID=111861 RepID=A0A4D6BL56_9FLOR)

HSP 1 Score: 124 bits (311), Expect = 2.040e-33
Identity = 57/106 (53.77%), Postives = 78/106 (73.58%), Query Frame = 0

Query:   83 EITDDTFEAEVLDEERPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAELKIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHMD 188
            ++ D TF+ EVL+ + PVLV F APWCGPCRMV P+VDE+  E+ G+   +KV+ + TDENP T  E  IR+IPTLM+F + K V TV+GAVPKS L +++ K++D
Sbjct:    5 QVIDSTFQEEVLNHKLPVLVDFWAPWCGPCRMVAPVVDEIANEYNGS---IKVVTINTDENPSTATEYGIRSIPTLMIFKDGKRVDTVIGAVPKSTLATALNKYLD 107

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BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Match: K9UKE4_CHAP6 (Thioredoxin n=2 Tax=Chamaesiphon TaxID=217161 RepID=K9UKE4_CHAP6)

HSP 1 Score: 124 bits (310), Expect = 2.350e-33
Identity = 59/109 (54.13%), Postives = 81/109 (74.31%), Query Frame = 0

Query:   79 SCAPEITDDTFEAEVLDEERPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAELKIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHM 187
            S A E+TD +F+ +VLD E PVLV F APWCGPCRMVGP+VDE+ A++ G   K+KV +L TD NP   ++  IR+IPTLM+F   + V TVVGAVPK+ L ++++K++
Sbjct:    2 SSAVEVTDGSFKEDVLDSEIPVLVDFWAPWCGPCRMVGPVVDEIAAQYEG---KIKVFKLNTDNNPNVASQYGIRSIPTLMIFKGGQKVDTVVGAVPKATLSNTVEKYL 107

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BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Match: UPI0019F25E60 (Thioredoxin n=1 Tax=Gloeomargaritaceae cyanobacterium C42_A2020_066 TaxID=2747801 RepID=UPI0019F25E60)

HSP 1 Score: 123 bits (309), Expect = 3.330e-33
Identity = 59/109 (54.13%), Postives = 79/109 (72.48%), Query Frame = 0

Query:   79 SCAPEITDDTFEAEVLDEERPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAELKIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHM 187
            S A  +TD +F+ EVLD   PVLV F APWCGPCR+V P+VDE+  E+ G   K+KV++L TDENPK  +E  IR+IPTLM+F   + V T+VGAVPK++L  ++ KH+
Sbjct:    2 SAAAAVTDASFQGEVLDSAVPVLVDFWAPWCGPCRIVAPVVDEIAQEYAG---KVKVVKLNTDENPKVASEYGIRSIPTLMVFKGGQKVDTLVGAVPKTSLADTLNKHL 107

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BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Match: A0A1B7W1G5_APHFL (Thioredoxin n=5 Tax=Nostocales TaxID=1161 RepID=A0A1B7W1G5_APHFL)

HSP 1 Score: 123 bits (309), Expect = 3.640e-33
Identity = 59/109 (54.13%), Postives = 81/109 (74.31%), Query Frame = 0

Query:   79 SCAPEITDDTFEAEVLDEERPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAELKIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHM 187
            S A  +TD TF+ EVLD   PVLV F APWCGPCRMVGP+VDE+  ++G    KLKV+++ TDENP+  ++  IR+IPTLM+F + + V  VVGAVPK+ L ++++KH+
Sbjct:    2 SAAAPVTDSTFKEEVLDSIVPVLVDFWAPWCGPCRMVGPVVDEIADQYGE---KLKVVKVNTDENPQIASQYGIRSIPTLMIFKDGQKVDMVVGAVPKTTLSTTVEKHL 107

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BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Match: Q7NM87_GLOVI (Thioredoxin n=3 Tax=Gloeobacterales TaxID=307595 RepID=Q7NM87_GLOVI)

HSP 1 Score: 123 bits (309), Expect = 3.640e-33
Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 0

Query:   79 SCAPEITDDTFEAEVLDEERPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAELKIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHMDL 189
            S A  + D  F+ EVLD E PVLV F APWCGPCRMV P+VDE+  ++ G   KLKV+++ TDENP+  ++  IR+IPTLM+F     V  VVGAVPK+ L ++++KH+D+
Sbjct:    2 SAAVPVGDSNFKTEVLDSELPVLVDFWAPWCGPCRMVAPVVDEIAQQYSG---KLKVVKVNTDENPQVASQYGIRSIPTLMVFKSGSKVDMVVGAVPKTTLATTLEKHIDI 109

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot

BLAST of mRNA_C-linearis_contig99.17152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L318_9PHAE	1.350e-82	72.82	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
D7G7W3_ECTSI	5.680e-69	91.30	Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
A0A524RKQ5_9CYAN	2.910e-34	56.88	Thioredoxin n=2 Tax=Aphanocapsa feldmannii TaxID=1...	[more]
A0A6B1A1K2_9SYNE	1.170e-33	57.80	Thioredoxin n=16 Tax=Synechococcus TaxID=1129 RepI...	[more]
B1X5G8_PAUCH	1.320e-33	55.75	Thioredoxin n=1 Tax=Paulinella chromatophora TaxID...	[more]
A0A4D6BL56_9FLOR	2.040e-33	53.77	Thioredoxin n=1 Tax=Balbiania investiens TaxID=111...	[more]
K9UKE4_CHAP6	2.350e-33	54.13	Thioredoxin n=2 Tax=Chamaesiphon TaxID=217161 RepI...	[more]
UPI0019F25E60	3.330e-33	54.13	Thioredoxin n=1 Tax=Gloeomargaritaceae cyanobacter...	[more]
A0A1B7W1G5_APHFL	3.640e-33	54.13	Thioredoxin n=5 Tax=Nostocales TaxID=1161 RepID=A0...	[more]
Q7NM87_GLOVI	3.640e-33	52.25	Thioredoxin n=3 Tax=Gloeobacterales TaxID=307595 R...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 108..117 score: 59.22 coord: 100..108 score: 58.83 coord: 151..162 score: 35.93
None	No IPR available	GENE3D	3.40.30.10		coord: 82..188 e-value: 1.5E-26 score: 94.4
None	No IPR available	PANTHER	PTHR45663:SF1		coord: 79..188
None	No IPR available	PANTHER	PTHR45663	FAMILY NOT NAMED	coord: 79..188
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 17..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 26..34
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..189
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..32 score: 0.729
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 83..185 e-value: 1.1E-22 score: 80.0
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 75..188 score: 11.046
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 81..188

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig99	contig	C-linearis_contig99:218685..220458 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig99.17152.1	mRNA_C-linearis_contig99.17152.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig99 217758..220563 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig99.17152.1 ID=prot_C-linearis_contig99.17152.1|Name=mRNA_C-linearis_contig99.17152.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=190bp
MGWRCRLGRRAMSSSRFLLLLLAVLRTRSGVAFTAVGRQRISNGMGKAGR
LHCSSKGAYPASLRRSRGGSGGLSMDARSCAPEITDDTFEAEVLDEERPV
LVFFRAPWCGPCRMVGPIVDEVIAEHGGAGGKLKVLELCTDENPKTVAEL
KIRNIPTLMLFTERKSVMTVVGAVPKSALVSSIKKHMDL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013766	Thioredoxin_domain
IPR036249	Thioredoxin-like_sf