prot_C-linearis_contig99.17148.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig99.17148.1
Unique Nameprot_C-linearis_contig99.17148.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length85
Homology
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BLAST of mRNA_C-linearis_contig99.17148.1 vs. uniprot
Match: A0A6H5KU43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU43_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 8.340e-29
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 
Query:   22 TFGGGTIGGSQNGDSGEEGSRRTVAIGSAEDERLKAPDVAATTVTESTMLVTLYDGVVLAARG 84
            TFGGGTIGGSQNGDSGEEGSRRTVAIGSAEDERLKAPDVAATTVTESTMLVTLYDGVVLAARG
Sbjct:  195 TFGGGTIGGSQNGDSGEEGSRRTVAIGSAEDERLKAPDVAATTVTESTMLVTLYDGVVLAARG 257
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BLAST of mRNA_C-linearis_contig99.17148.1 vs. uniprot
Match: D7G6J6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J6_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 3.310e-11
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 0 
Query:   22 TFGGGTIGGSQNGDSGEEGSRRTVAIGSAEDERLKAPDVAATTVTESTMLVTLYDGVVLAAR 83
            TF GG IGG+Q G      +RRTV +GS ED+RL  P+VAATTVT+STM++ LYD  VL+AR
Sbjct:  147 TFDGGVIGGAQRG------ARRTVVLGSEEDQRLNTPEVAATTVTDSTMIIPLYDAFVLSAR 202
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BLAST of mRNA_C-linearis_contig99.17148.1 vs. uniprot
Match: D7FWV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV7_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 3.320e-11
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 0 
Query:   22 TFGGGTIGGSQNGDSGEEGSRRTVAIGSAEDERLKAPDVAATTVTESTMLVTLYDGVVLAAR 83
            TF GG IGG+Q G      +RRTV +GS ED+RL  P+VAATTVT+STM++ LYD  VL+AR
Sbjct:  147 TFDGGVIGGAQRG------ARRTVVLGSEEDQRLNTPEVAATTVTDSTMIIPLYDAFVLSAR 202
[Close]
BLAST of mRNA_C-linearis_contig99.17148.1 vs. uniprot
Match: A0A6H5L5E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E5_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.350e-8
Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 0 
Query:   22 TFGGGTIGGSQNGDSGEEGSRRTVAIGSAEDERLKAPDVAATTVTESTMLVTLYDGVVLAAR 83
            TFGGGTIGG+QNG      +R+ VA+ S ED RLK P VAATTV  +TM + L D  V AAR
Sbjct:  275 TFGGGTIGGAQNG------ARKLVALDSEEDFRLKTPGVAATTVDHTTMFLRLNDAAVFAAR 330
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KU43_9PHAE8.340e-29100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6J6_ECTSI3.310e-1159.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWV7_ECTSI3.320e-1159.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5E5_9PHAE2.350e-858.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig99contigC-linearis_contig99:120724..120978 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig99.17148.1mRNA_C-linearis_contig99.17148.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig99 120416..121289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig99.17148.1 ID=prot_C-linearis_contig99.17148.1|Name=mRNA_C-linearis_contig99.17148.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=85bp
MTPEPGRRWTTTAECSRVTAATFGGGTIGGSQNGDSGEEGSRRTVAIGSA
EDERLKAPDVAATTVTESTMLVTLYDGVVLAARG*
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