prot_C-linearis_contig99.17168.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig99.17168.1
Unique Nameprot_C-linearis_contig99.17168.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length200
Homology
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BLAST of mRNA_C-linearis_contig99.17168.1 vs. uniprot
Match: D7G7U7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U7_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 2.570e-37
Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0 
Query:   20 MPFSLTENIPFLALPVTLITLKITYDVLPPVAFLALVAVAIGCYMFYAGNKSPAAQRTAKKAEATADSLIQELTREEDRAKE 101
            MPFSLTEN+PFLALP+ LITLK+TYDVLP +AFLALVAVA+GCYMFYAG  SPAAQRTAKKAEATADSLI+ELTREEDRAKE
Sbjct:    1 MPFSLTENLPFLALPLALITLKVTYDVLPFMAFLALVAVAVGCYMFYAGKSSPAAQRTAKKAEATADSLIRELTREEDRAKE 82
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7U7_ECTSI2.570e-3787.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availableTMHMMTMhelixcoord: 46..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig99contigC-linearis_contig99:302401..307195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig99.17168.1mRNA_C-linearis_contig99.17168.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig99 302401..307195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig99.17168.1 ID=prot_C-linearis_contig99.17168.1|Name=mRNA_C-linearis_contig99.17168.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=200bp
TREAPPPPSSRPRISSPGTMPFSLTENIPFLALPVTLITLKITYDVLPPV
AFLALVAVAIGCYMFYAGNKSPAAQRTAKKAEATADSLIQELTREEDRAK
EEAARKQAAKDRKAAAKKQQEAARKAAVAAKEAAAAKLLAQQEEESKPRS
APQTQSSGKKQPKKKQPKKQPKAAQQVEEEDSDDEDDFLLRMADLERAR*
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