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Homology
BLAST of mRNA_C-linearis_contig98.17142.1 vs. uniprot
Match: D7FMQ7_ECTSI (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ7_ECTSI) HSP 1 Score: 330 bits (845), Expect = 1.720e-101 Identity = 164/194 (84.54%), Postives = 176/194 (90.72%), Query Frame = 1
Query: 478 GYARIALVLTSYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYGRLHAFAFLVLMFVDLFSHWMHTHSVVDEHHKSTTALRRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQSRAFPLLRKLCFWLCLPSCVLKQFINIAQIFSAAQTLALEELDQ 1059
GYAR+ALVL SYYLAETNWKAS FYLVAFAGDAVDGH+AR F QASRFGAVLDMVTDRCSTAGLLLVLSRLY R HAFAFLVLMF+DLFSHWMHTHSVV++HHKST L+RRN L+R YYD+LPFFAFCCIG ELFYVLLYLLHFVS++SRAF LR CFWLCLP+CVLKQF+NIAQIFSAA LALEELDQ
Sbjct: 9 GYARVALVLASYYLAETNWKASSCFYLVAFAGDAVDGHVARKFKQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVVEKHHKSTATLKRRNMLIRTYYDNLPFFAFCCIGAELFYVLLYLLHFVSEESRAFAPLRTSCFWLCLPACVLKQFVNIAQIFSAASCLALEELDQ 202
BLAST of mRNA_C-linearis_contig98.17142.1 vs. uniprot
Match: A0A6H5JEV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV5_9PHAE) HSP 1 Score: 316 bits (810), Expect = 7.970e-95 Identity = 164/211 (77.73%), Postives = 178/211 (84.36%), Query Frame = 1
Query: 427 EEHQRVRNVLLYYPNLIGYARIALVLTSYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYGRLHAFAFLVLMFVDLFSHWMHTHSVVDEHHKSTTALRRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQSRAFPLLRKLCFWLCLPSCVLKQFINIAQIFSAAQTLALEELDQ 1059
EE +RVR+VLLYYPNLIGYAR+ALVL SYYLAETNWKAS FYLVAFAGD VDGH+AR F QASRFGAVLDMVTDRCSTAGLLLVLSRLY R HAFAFLVL+ VV++HHKST L+RRN L+R YYD+LPFFAFCCIG ELFYVLLYLLHFVS++SRAF LR CFWLCLP+CVLKQF+NIAQIFSAA LALEELDQ
Sbjct: 119 EEQKRVRSVLLYYPNLIGYARVALVLASYYLAETNWKASSCFYLVAFAGDVVDGHVARKFKQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLI-------------VVEKHHKSTATLKRRNILIRTYYDNLPFFAFCCIGAELFYVLLYLLHFVSEESRAFTPLRTSCFWLCLPACVLKQFVNIAQIFSAASCLALEELDQ 316
BLAST of mRNA_C-linearis_contig98.17142.1 vs. uniprot
Match: D8LI10_ECTSI (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI10_ECTSI) HSP 1 Score: 238 bits (606), Expect = 7.570e-68 Identity = 126/207 (60.87%), Postives = 152/207 (73.43%), Query Frame = 1
Query: 451 VLLYYPNLIGYARIALVLTSYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRCSTAGLLLVLSRLY-GRLHAFAFLVLMFVDLFSHWMHTHSVVDEHHKSTTALRRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQSRAFP------LLRKLCFWLCLPSCVLKQFINIAQIFSAAQTLALEE 1050
VL Y+PNLIGYARI VL SYYLA+TNWKAS Y++AF GDAVDG +AR FNQ+S+FGAVLDMVTDRCSTAGLL+VLSRLY G AF FL+LMF+DLFSHWMH S HHK+ L RN + R +Y PFFAFCC+GTELFYV LYLL FV + S A L +C+++ LP+CV KQ +N+AQ+ +A+ +LA E
Sbjct: 9 VLFYFPNLIGYARIIAVLASYYLADTNWKASFVCYVLAFVGDAVDGAVARYFNQSSKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFVPEASLALGGGGAAVSLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASAE 215
BLAST of mRNA_C-linearis_contig98.17142.1 vs. uniprot
Match: A0A835ZHK8_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK8_9STRA) HSP 1 Score: 211 bits (538), Expect = 9.310e-59 Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 1
Query: 451 VLLYYPNLIGYARIALVLTSYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYGRLHAFAFLVLMFVDLFSHWMHTHSVVDE-HHKSTTALRRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQSRAFPL-------LRKLCFWLCLPSCVLKQFINIAQIFSAAQTLA 1041
V LYYPNLIGY+RIA VL SYY+A TNWK S+ FY++AFAGD VDG +AR FNQ+S FGA LDMVTDRCSTAG+L VL+ LY +AF F+ LMF+D+FSHW+H SV + HHK+ L+ RN+L+R +Y PFF +CC+ TE FY+ LY+L F AF L +L F+ CLP+CV KQ +NIAQ+ +AA ++A
Sbjct: 9 VFLYYPNLIGYSRIAAVLASYYVAGTNWKLSVCFYVLAFAGDVVDGAVARRFNQSSSFGATLDMVTDRCSTAGMLFVLAGLYPA-YAFHFMCLMFLDIFSHWIHVASVATKGHHKAAGTLQGRNWLIRLFYSCYPFFGYCCVFTEFFYICLYMLAF---NKDAFITVGGVEVHLWQLTFYGCLPACVCKQAVNIAQLCAAAYSMA 209
BLAST of mRNA_C-linearis_contig98.17142.1 vs. uniprot
Match: A0A2D4CBV6_PYTIN (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBV6_PYTIN) HSP 1 Score: 189 bits (479), Expect = 7.510e-51 Identity = 107/208 (51.44%), Postives = 141/208 (67.79%), Query Frame = 1
Query: 451 VLLYYPNLIGYARIALVLTSYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYGR-LHAFAFLVLMFVDLFSHWMHTHSVVDEHHKSTTALRRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQSRAFPL----LRKLCFWLCLPSCVLKQFINIAQIFSAAQTLALEELDQ 1059
V Y PN+IGY R+ L S +A ++K S+ Y ++F D DG AR FNQ S +GAVLDMVTDRCSTAGLL++LS LY + +H F FL+++ D SHW H +S HHK+ +A RNFL+R YY PFF +CC+GTELFY+LLY+LHF S P+ L LCF++CLP+CVLK INIAQ+ SAA T+A ++++Q
Sbjct: 14 VFFYVPNIIGYVRVVLSAYSLLIAMDDYKTSIICYALSFVCDYFDGFFARWFNQCSNYGAVLDMVTDRCSTAGLLVILSHLYPKFMHVFLFLLIL--DFSSHWYHMYSSKG-HHKTVSA--DRNFLLRLYYGVYPFFGYCCVGTELFYILLYVLHF--NASYVIPVIELPLHHLCFYVCLPACVLKNLINIAQLSSAAYTVAQDDVNQ 214
BLAST of mRNA_C-linearis_contig98.17142.1 vs. uniprot
Match: A0A5D6XI13_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI13_9STRA) HSP 1 Score: 187 bits (474), Expect = 3.530e-50 Identity = 106/203 (52.22%), Postives = 138/203 (67.98%), Query Frame = 1
Query: 451 VLLYYPNLIGYARIALVLTSYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYGRLHAFAFLVLMFVDLFSHWMHTHSVVDEHHKSTTALRRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQ---SRAFPLLRKLCFWLCLPSCVLKQFINIAQIFSAAQTLALEE 1050
V Y PNLIGYAR+AL S +A+T+ +AS+ Y ++F D DG AR F+Q S FGAVLDMVTDRCSTAGLL++LS LY + + AFL L+ +D SHW H ++ HHK+ A RN L+R YY + PFF FCC+GTELFY+LLY+LHF PL +LC+++C P+CVLK INIAQ+ SAA +A+E+
Sbjct: 12 VFFYVPNLIGYARVALTAYSLAVAQTSPRASVTCYALSFVCDYFDGFFARWFDQCSNFGAVLDMVTDRCSTAGLLVILSHLYPQ-YMLAFLFLLILDFSSHWYHMYASKG-HHKTVAA--ERNLLLRVYYGNYPFFGFCCVGTELFYILLYVLHFFPTALIPGVDVPL-AQLCYYVCGPACVLKNLINIAQLTSAAHAVAVED 209
BLAST of mRNA_C-linearis_contig98.17142.1 vs. uniprot
Match: A0A8K1FF61_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF61_PYTOL) HSP 1 Score: 184 bits (468), Expect = 1.990e-49 Identity = 104/205 (50.73%), Postives = 135/205 (65.85%), Query Frame = 1
Query: 451 VLLYYPNLIGYARIALVLTSYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYGRLHAFAFLVLMFVDLFSHWMHTHSVVDEHHKSTTALRRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQ---SRAFPLLRKLCFWLCLPSCVLKQFINIAQIFSAAQTLALEELD 1056
V Y PNLIGY R+ L L S Y+A ++K S+ Y ++F D DG AR FNQ S FGAVLDMVTDRCSTAGLL++LS LY + + FL L+ +D SHW +S HHK+ RN L+R YY+ PFF +CC+GTE FY+LLY+LHF AFPL KL F++CLP+CVLK IN+AQ+ SAA +A ++++
Sbjct: 10 VFFYVPNLIGYVRVVLSLYSLYVALDDYKTSVLCYALSFVCDYFDGFFARWFNQCSNFGAVLDMVTDRCSTAGLLVILSHLYPK-YMIVFLYLLILDFSSHWYQMYSAKG-HHKTVAD---RNLLLRLYYNVYPFFGYCCVGTEFFYILLYVLHFDPAYVIPGTAFPL-EKLAFYVCLPACVLKNIINVAQLASAAHAVAQDDIN 208
BLAST of mRNA_C-linearis_contig98.17142.1 vs. uniprot
Match: A0A0N7L8K7_PLAHL (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L8K7_PLAHL) HSP 1 Score: 184 bits (468), Expect = 2.050e-49 Identity = 104/207 (50.24%), Postives = 137/207 (66.18%), Query Frame = 1
Query: 442 VRNVLLYYPNLIGYARIALVLTSYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYGRLHAFAFLVLMFVDLFSHWMHTHSVVDEHHKSTTALRRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQSRAFPLLR----KLCFWLCLPSCVLKQFINIAQIFSAAQTLALEE 1050
V V Y PNLIGY R+ L L S +A TN+K S+ Y ++F D DG AR NQ+S +GAVLDMVTDRCSTAGLLLVLS LY + + FL L+ +D SHW H +S HHK +A RNF++R YY PFF FCC+G ELFY+LLY+LHF + P++ KLCF++CLP+C+ K +N+AQ+ SAA ++A ++
Sbjct: 6 VMGVFFYVPNLIGYMRVLLTLYSLAVAFTNYKVSVLCYALSFTCDYFDGFFARLCNQSSTYGAVLDMVTDRCSTAGLLLVLSHLYPQ-YWIIFLYLLILDFSSHWYHMYSSRG-HHKVVSA--ERNFVLRFYYGFYPFFGFCCVGAELFYILLYVLHF--NPTVLIPIVNVPVMKLCFYVCLPACICKNIVNLAQLCSAASSIATDD 206
BLAST of mRNA_C-linearis_contig98.17142.1 vs. uniprot
Match: A0A3M6VUR7_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUR7_9STRA) HSP 1 Score: 184 bits (467), Expect = 3.270e-49 Identity = 105/211 (49.76%), Postives = 141/211 (66.82%), Query Frame = 1
Query: 430 EHQRVRNVLLYYPNLIGYARIALVLTSYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYGRLHAFAFLVLMFVDLFSHWMHTHSVVDEHHKSTTALRRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQSRAFPLLR----KLCFWLCLPSCVLKQFINIAQIFSAAQTLALEE 1050
+H+ V V Y PN+IGY RI L + S +A T++K S+ Y ++F D DG AR +Q S FGAVLDMVTDRCSTAGLL+VLS LY + + F+ L+ +D SHW H +S HHK +A RNFL+R YY PFF FCC+GTELFY+LLY+L+F K P++ +LC+++CLP+CV K F N+AQ+FSAA ++A E+
Sbjct: 7 KHRTVMGVFFYVPNVIGYMRILLSIYSLAVAFTDYKTSVLCYALSFTCDYFDGFFARLCDQCSSFGAVLDMVTDRCSTAGLLIVLSHLYPQ-YMMLFMYLLILDFSSHWYHMYSSRG-HHKLVSA--ERNFLLRFYYGCYPFFGFCCVGTELFYILLYVLYFDPKLL--IPIINVPVMQLCYYVCLPACVCKIFTNLAQLFSAAHSIASED 211
BLAST of mRNA_C-linearis_contig98.17142.1 vs. uniprot
Match: F0W2D6_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2D6_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.120e-48 Identity = 104/204 (50.98%), Postives = 134/204 (65.69%), Query Frame = 1
Query: 445 RNVLLYYPNLIGYARIALVLTSYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYGRLHAFAFLVLMFVDLFSHWMHTHSVVDEHHKSTTALRRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQSRAFPLL--RKLCFWLCLPSCVLKQFINIAQIFSAAQTLALEE 1050
+NV LY PNLIGY R+AL L S +A ++K S+ Y +FA D DG AR NQ S FGAVLDMVTDRCSTAGLL +L+ LY + FL ++ +D SHWMH +S HHK T L RNFL+R YY P F FCC+G+E+FY+LLY+L F + F L LC+++CLP+CVLK +N+AQ+ SAA +A E+
Sbjct: 28 KNVFLYVPNLIGYLRVALSLYSLSIALIDYKISLLCYACSFACDYFDGLFARWLNQCSSFGAVLDMVTDRCSTAGLLFILAHLYPDKRIY-FLYILLLDFSSHWMHMYSSRG-HHK--TGLNERNFLLRVYYGCYPLFGFCCVGSEVFYMLLYVLAFEASYKIPFTQLPLTHLCYYVCLPACVLKNIVNLAQLLSAANAIATED 227
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 334.0 |
| Seed ortholog evalue | 8.4e-89 |
| Seed eggNOG ortholog | 2880.D7FMQ7 |
| Preferred name | PIS1 |
| KEGG rclass | RC00002,RC00031,RC00078,RC02795 |
| KEGG ko | ko:K00999,ko:K15893 |
| KEGG Reaction | R01388,R01802 |
| KEGG Pathway | ko00260,ko00562,ko00564,ko00630,ko01100,ko01110,ko01130,ko01200,ko04070,map00260,map00562,map00564,map00630,map01100,map01110,map01130,map01200,map04070 |
| KEGG Module | M00532 |
| Hectar predicted targeting category | signal peptide |
| GOs | GO:0003674,GO:0003824,GO:0003881,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0090407,GO:1901576 |
| EggNOG free text desc. | CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity |
| EggNOG OGs | COG0558@1,KOG3240@2759 |
| Ec32 ortholog description | CDP-diacylglycerol-inositol 3-phosphatidyltransferase |
| Ec32 ortholog | Ec-23_001230.1 |
| EC | 2.7.8.11 |
| COG Functional cat. | I |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
| Exons | 8 |
| Model size | 3741 |
| Cds size | 1011 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930844.8766708-UTR-C-linearis_contig98:574856..574913 | 1622930844.8766708-UTR-C-linearis_contig98:574856..574913 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig98 574857..574913 + |
| 1690881279.0873652-UTR-C-linearis_contig98:574856..574913 | 1690881279.0873652-UTR-C-linearis_contig98:574856..574913 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig98 574857..574913 + |
| 1622930845.0574849-UTR-C-linearis_contig98:579726..581927 | 1622930845.0574849-UTR-C-linearis_contig98:579726..581927 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig98 579727..581927 + |
| 1690881279.191483-UTR-C-linearis_contig98:579726..581927 | 1690881279.191483-UTR-C-linearis_contig98:579726..581927 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig98 579727..581927 + |
| 1622930845.0806065-UTR-C-linearis_contig98:582010..582482 | 1622930845.0806065-UTR-C-linearis_contig98:582010..582482 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig98 582011..582482 + |
| 1690881279.2024763-UTR-C-linearis_contig98:582010..582482 | 1690881279.2024763-UTR-C-linearis_contig98:582010..582482 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig98 582011..582482 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930844.8931763-CDS-C-linearis_contig98:574913..575334 | 1622930844.8931763-CDS-C-linearis_contig98:574913..575334 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 574914..575334 + |
| 1690881279.101008-CDS-C-linearis_contig98:574913..575334 | 1690881279.101008-CDS-C-linearis_contig98:574913..575334 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 574914..575334 + |
| 1622930844.9362316-CDS-C-linearis_contig98:576294..576358 | 1622930844.9362316-CDS-C-linearis_contig98:576294..576358 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 576295..576358 + |
| 1690881279.1111758-CDS-C-linearis_contig98:576294..576358 | 1690881279.1111758-CDS-C-linearis_contig98:576294..576358 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 576295..576358 + |
| 1622930844.9585238-CDS-C-linearis_contig98:576680..576751 | 1622930844.9585238-CDS-C-linearis_contig98:576680..576751 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 576681..576751 + |
| 1690881279.1242228-CDS-C-linearis_contig98:576680..576751 | 1690881279.1242228-CDS-C-linearis_contig98:576680..576751 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 576681..576751 + |
| 1622930844.9761376-CDS-C-linearis_contig98:577193..577350 | 1622930844.9761376-CDS-C-linearis_contig98:577193..577350 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 577194..577350 + |
| 1690881279.1341817-CDS-C-linearis_contig98:577193..577350 | 1690881279.1341817-CDS-C-linearis_contig98:577193..577350 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 577194..577350 + |
| 1622930844.9991238-CDS-C-linearis_contig98:577979..578083 | 1622930844.9991238-CDS-C-linearis_contig98:577979..578083 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 577980..578083 + |
| 1690881279.1443136-CDS-C-linearis_contig98:577979..578083 | 1690881279.1443136-CDS-C-linearis_contig98:577979..578083 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 577980..578083 + |
| 1622930845.016824-CDS-C-linearis_contig98:578778..578858 | 1622930845.016824-CDS-C-linearis_contig98:578778..578858 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 578779..578858 + |
| 1690881279.1613977-CDS-C-linearis_contig98:578778..578858 | 1690881279.1613977-CDS-C-linearis_contig98:578778..578858 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 578779..578858 + |
| 1622930845.0408754-CDS-C-linearis_contig98:579612..579726 | 1622930845.0408754-CDS-C-linearis_contig98:579612..579726 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 579613..579726 + |
| 1690881279.1783726-CDS-C-linearis_contig98:579612..579726 | 1690881279.1783726-CDS-C-linearis_contig98:579612..579726 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig98 579613..579726 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig98.17142.1 >prot_C-linearis_contig98.17142.1 ID=prot_C-linearis_contig98.17142.1|Name=mRNA_C-linearis_contig98.17142.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=337bp
MRFASLLLAHVVVAVVATHGGGSTTKSEIRRGREVSTAAAVVGRSVPTSD SSPHGNAALRRSPAPAMCSSSSPRGAREIASRRRKTSSNPHRRLKALPPQ PPPLWLLRGGGSTATRREERRAYEEHQRVRNVLLYYPNLIGYARIALVLT SYYLAETNWKASMGFYLVAFAGDAVDGHIARAFNQASRFGAVLDMVTDRC STAGLLLVLSRLYGRLHAFAFLVLMFVDLFSHWMHTHSVVDEHHKSTTAL RRRNFLVRKYYDHLPFFAFCCIGTELFYVLLYLLHFVSKQSRAFPLLRKL CFWLCLPSCVLKQFINIAQIFSAAQTLALEELDQNI* back to topmRNA from alignment at C-linearis_contig98:574857..582482+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig98.17142.1 ID=mRNA_C-linearis_contig98.17142.1|Name=mRNA_C-linearis_contig98.17142.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7626bp|location=Sequence derived from alignment at C-linearis_contig98:574857..582482+ (Chordaria linearis ClinC8C monoicous) ACCGCCGGCGCGAACGAGCCCGGACAAAACACCCAAGCCCTGCAGCATCA
CAGCATCATGCGCTTCGCAAGCTTGCTGCTGGCACACGTAGTGGTGGCGG
TTGTGGCCACACACGGCGGTGGAAGCACGACGAAATCCGAAATTCGAAGA
GGTCGCGAAGTATCCACAGCAGCAGCTGTAGTAGGGCGCAGCGTACCGAC
TTCCGATAGCAGCCCACACGGTAATGCGGCTCTACGTAGATCACCAGCAC
CAGCTATGTGTTCATCGTCGTCTCCGCGAGGAGCGCGAGAAATTGCAAGC
CGGAGACGGAAAACTTCATCAAATCCCCACCGCCGCTTGAAAGCTCTTCC
ACCGCAACCGCCGCCGCTATGGTTGCTTCGGGGTGGGGGATCTACTGCTA
CGCGACGGGAAGAGAGACGGGCGTACGAGGAGCACCAGCGAGTGAGAAAT
GTGCTGCTGTACTACCCAAACCTGATAGGTAAGGTTTCTGAAGACGCAAG
GTTTCTGAAGACGCAAGGTTTCTGAAGACGCGAACAACAAGCAGCACATT
TCATCGCGGGCGGTCTCACAAACAAACGCAGCAGCTAGCAGCAGTTCGGT
GCGCAGATAGATACGGCGGTGCTCGAGATGTCTAGCGCTGCTGCTGTTTG
TCAAGGCTCTCATGTAGCAACAACGGCGGCGTTTCTAGATAGCAGAATCG
CTCTGTGGCTTCTGCTGCTGTTGTTGCTACTCCTGCACTTACTATGTTTG
CCTTCACCTTACATCAAGCCTGAAATGGGCTCGTGCTGAAACAAATTGAA
GTGAGGATCGCATCTAGACGAGCGTCAACGGCCACGCTGTGATCCCTACT
CCCCCTACTCACACCCTTGATACTTTTATTCTGCGCATTGAATCCGCCGG
TATTTTTTTCTCTACGCGGCAGGAACACCGAGCATGTACATACTGCTGTA
TGTCACATGACACATCGCTGTGTTTATTTGTTGATGCAAATGTGTAATTT
AGCATCGTGCACATCAACACTTCTTTATTGTAGGAGTATGTGTTTGAACA
CCACATTTCTATTTTGATTTTTCCGAAGTGTACCTACTGCTTCGTAGGAT
CGCTCGTGGAGGGTGCGTTTGGTGCGTTCGTTGCGCGTGGCACCCTAACC
CTCTGGTGCCGCCGGCGCTCACGGGTCGCTTCCAGGACATGGATGTCTCT
CTCAAAGAACAAGCTATAATAGCCGAGGACTTAGGGCACGTTTGTCGTGG
CTAGGGTTTTTACGTTTTTACTCGGCATACGAAATGAGGCATGCTGCCTA
AGCAGGACTGTCAGTTCGTTCACCGTCTTGGGTAGGGTTCCGCTCTCCCC
ATCAAATAATTTTCTAGCTCGCTATCCGTTGTTGGAAGCGAATTAAACTC
CGCCTGCCCCCTCGACCCCCGTTTTTTTCCACCTTCAGGCTACGCGAGAA
TAGCCCTGGTGCTAACGAGCTACTACCTCGCGGAGACCAACTGGAAAGCA
AGGTGGGGAGGGGGGAAGAGAGAGCGAGATGGAAAGGAGAACGTGCCCTC
TACTACTTACTGTCCATGTCCAGGCTTCCTTCGGCCAGACCATATTCGGA
ATCAGCTCAGCTTCTTTCAGGCGCCTGCTGCTCTTCGGAACTAATTATCA
TGCATAGGCTTACTTTGTCCATCCGACAACAACTGCAGATTCGGTCAGTC
GAAATACACTCATCATGTCTATAAAAAGATTAATTGTTTTTACTTGATCC
GCCATACGTCTTTCTCTCGCCCTTGCCGATTGTGTGACACCTAACCCCGA
CTTAATATGTTGTGCTTGTTTCAGCATGGGGTTCTACCTGGTGGCCTTCG
CGGGGGACGCTGTTGACGGACACATCGCGCGCGCCTTCAACCAAGGTGCA
GACAGGATTGTGTTTTTCATCAGCCCGCGAGATACATTTTCTACCTCCTG
TTTATATTAGTGCGCAATGCACTGCGCTGCACGGCGCTGTAGCTGTGTTG
CCGTAGCTGTACCAGGTGCTGTACTGCAAGTTAGGCTGCTAAAGTTTCGC
GAGTTGGACGTTCCAACGTTTGCTCCATCAAGTCGGATTGCCACGCCAGC
TTCACTTGCCACGCAAGGTTATCTTGAGACGATGAACCGCAACGAAAACC
CGAACAACAGCAATGAGTGCACTCACGACGCCCCCCGGTGGTGTCTTCTT
TTGCGTGTCAACCACAACGATGTACATAGTCGGAAAACCCCCGGTTGTAA
CTTCCTTTTTGCGCCGATCAACAGGCAGCAGGATAGTCACGAAACTGCTG
TCTGTCCCCGTCATGTCTTTGTTTTGTGTGTCGAAAGCCTCGCGGTTCGG
CGCGGTGTTGGACATGGTGACGGATCGGTGCTCGACGGCGGGGCTGCTGC
TGGTGCTGTCCCGGCTGTACGGGCGGCTTCACGCCTTCGCCTTCCTCGTC
CTCATGTTCGTCGACCTCTTCAGCCACTGGATGCACACGCACAGGCGAGG
CGAGGGAGACCCACCTTACCGTGTATTGAAGAGATGGCTTCGCTGTCCTG
CTGTGCAGGGCCCTAGACCCAACGCGTCCACTCTTAGCTACAAACCACTT
TTTTTGTGCAGAGGTTCTTTTGAAGGCGGTGTCGGGGTCCATTTTATTGT
AACTCTCCAGTTATTTCGTTTTTTTCCATGGGGGCAGGAGTAGAAGCAGG
TAATAGTAGATGTTGTTGCTGCTGGTGCTGTTGTTTGTCATGTCTTGTGT
CGGGTTGCTACAGGAAAACGTTGGTGATGAAAACGGTGCGGTCAGCAGCA
CGGGTGTGTGCAACCGTCAAGGAAGTTTTGGACAGCCTGACACAGATGGG
ATGGGGGGAAACAGGACACTAACAACGCCTAGCCGAGATCGGTCGAGGTT
GATAGTTTTCCACAAGAGACCAAACACCTGGGGGATAAAATGAGCAAAAG
GGCTAATAGAGTCTTCGGGAAACACGTTGGACGCGCCTAAGCGTAGGTAG
GTGCTTCTGGTATGGATAGCACCCGCCTCCAAATGTTCATGTTTCGGATC
GAGCGTTCAGAGCAAGCATCCCCTCCCGGCGCTCTTCTGTCGCTGCCGTG
TGTTTGTTCTCCCCCGTCTTCAGCGTTGTCGACGAACATCACAAGTCCAC
GACCGCTCTCAGGCGGAGGAACTTCTTAGTCCGCAAATACTACGACCACC
TTCCCTTCTTCGCCTTCTGCTGCATCGGTGAGGATACTTGCATTGATTGC
ATCGATAAGTTCAACCATGTCCAGAGCCGTGTAAACATCGTGCACGTTTC
ATGAAGGCACCCTACGAAGCAAAGGGCAGCTCGCTCTTGGGGAGATGGAC
ACTTTGATTGTACTGCTGTGCTGCATGTCGCACATCGTCTCCCTCCTTTA
CCCGCCCGGGGTGAGAGGAAAACTTGTCTCCCTTTTTATGAACTTGTCCA
CAAATAAATTTAGATTCGTTCGTGCACTAAGGGTTGGTGTTTACGCGTTC
GCTTGGCACAGCCAGTAGAGTTCATTCTTGGGCAAGTTTTTTCGCTGCGT
CAAAACCAGAAGAAGAAACTTGGGTTTGGGGTACGACACGGCATGCAAAC
GCTCTGAAACAACGACTCACGGTATCGTTTCGTTGAGCGCATGACGGAAA
GTACGTTTACCCGTTAAAAATCCCGTAAAAAAACACGGGAGAAGCTGCAG
TACATACGTAAAAAGACGCGCCTTCATGAAGGAATCACGCGGATTTGTTC
TTGACGTCGGCATCGATCATTCCAACCGCCTGGCAGTGCATAACTAACTT
CGAACGTGTGCCCAAGGCATGTGCAGCGAGAGAGGTGAAAACACACGACG
ACCGAAAGCTTGAGCTCCGAATCCCTGTGCCCCTTTTATCGGATCGCCTA
TTTTTCTGTATCTATCTCTAAGGCACCGAGCTGTTCTACGTGCTGCTTTA
CCTCCTGCACTTCGTGTCCAAGCAGTCTAGGGCCTTCCCACTGCTTCGCA
AGGTGAGACATCATCTGTATCTTCCATCTTCCATGCCATAATGAACCCGA
AATTGCACAGCAGCAGGGTACCGTTTACTTCAAGTTTAGTTTGTTTTGCG
CTTGGCTGCTGTTTTGGCTTTCGTTTCAATCGCCAGTCACGGTGCCGCCA
GTCACGGTGCCCCTACCCTTCGCGGAAAGACCTTGCTTATTATGTATCCA
AACGTAGACAACCGGAGCCGGTTTTAGTGCGCAGGCAGTGCCGGAAATTG
CCTGGACACTTTTTGCGGTTTGCTTTGTGGATGGACTCCATTTTTTTTGC
AAACCGTTCGGATCTACGCATTTTTGCATTTTGTCGCCCTTTGGGGATTG
AGTCGCGCTCGGAAAGTAATTCAAGTGCTGTGATCTGAAGTTGCCAAGGA
GGGAGAGAGATAGTCCAGGCAATCCATTTCGACCAAGAGTATGCGAATCG
ATTCAACGGTGCTTCTCCTTCTCCCGCGGGTCGGGTGAAATTCCTTCATG
GTGTAGAGGTGCTTGGTCTGGCCAGCAGCGTGTGAGCGAGCAACTCATTG
CTTTTTTTTACCTTCAGTTGTTTTGGGAGTAGATTAGACCGACCGCTTGC
TTTCTCGTGTCCGATCGCTGGCCGATGGTCGATTGATTCTCTCTTCCTGT
TGTAGCCCCAAAGGTAAGCAAGTTAAGGTAGTGTTGGCATGACGATTGTC
TTTTACTTCTCTCTCGCTCCCGCCCTCCCTCTCTCTTCCCCTTCCCCTGC
CGCCAGTTGTGCTTCTGGCTATGCCTGCCGTCGTGCGTCCTGAAGCAGTT
CATCAACATTGCCCAGATCTTCTCTGCCGCACAGACTCTGGCCCTTGAGG
AGCTGGACCAAAATATTTAACTGCTGCTGCTGTCGCTTCCTCGTTCCGAG
AAGCTAACGAACCCCACTCATATGGAAGGCGCACGCAGTGACCTAGTTTC
ATACCCTCGAGTTTTGGAGGGGTAAAAAATGAGGTGACAAGGTGCGCGTT
CCATGAGTAGGGCAGGGCTCGTCAGCTCTCAAGAACGAGGCAGCACATTT
AGGAAAGACAGACAGACAGACAGCAGTGACGCTGCTGACAGTCTCTTAAG
ACCTCCTTTGTTGCGTTTGTTGCACGACCGTGAGTACAGAGCAGCACCAA
AACGGCTCGGCTGTTTTGTTGACAGAACGGGTTGAAACGACTCTTCCTAT
CATCAGGTGCGGGGTGCAGCATGCATGTTTCCCTTCTTCTGCGCAGGCGG
CGTGGACCGATCTACCTGTCTGTGCGGGTTGTCATTCTCCCGTGTTTTTA
TGTCTACATAGGCGGTGGTTTTCTGTGTACAGTAGCCACTCACCCGCGCA
TGGGACCGGCGATCTGTTATTTATTCTTCACCATTATCTATTTCGGTTCA
AGTGTACAATCAATAGTTGTCCGTAGACACCGCTTTCGGACCAAGGACAG
GGGGAGTCGTGGGTGGTGTTGATCGTATTCGGCAGCGAAGAATGGGTGGG
CGCGTGCTCGTTGTATCTACTGTTGTATGTAGGCCGACGACCAACAGCGT
ATCAATCTGTTCTTTCTTCGTAAATATGAGTAGATTGCTTCGCGAGACTG
CTGTCTATTGAGGGGCTGTTTCCCAGCTGCCCGGATTGTGTATTCGACGG
AGCGTGTCTTTGTTTTTGTCCATGCATGCGCTCGAAAAAGGAAAAAGCCT
CGTCCTCGTCCTCTCGACGAGGTTTCAAGGCTGCTGTAGGCAGATACATG
TATGTACGTTTTAGACGCCAAACGTTGAAACTGGTTCAGCTAGCAGAGAT
TACCGCTGTGTCCGCGCTTCTAACTGCGAGTACGATACGTAGCTTTCAGC
ACGCAGGAGAATGTTGACGATTTCATTTTTTTGTGTTTGTTTATTGTTAA
TTGTTCCCTGGATATACTACATGTACTCGACCCCGGTTGGTTCTAGTTGT
ACAGAAAAATACACTGAACAAGTGTAGTACTCTAAATACACCGCAACGTG
TAGTACACGTCTCGCCTTGATAGGAAAGGGACTGTCACCAAAATAAATTA
AATGGGACGAAAACACACACACACACACACACACACACTCGTAGTGCGAA
GAAGAAAACCGGTCTATTATATTCCACGTCAAAAATCTAAATCTTTGTTC
CACCCGGACCTGCATACATAACTAACTGTTGTAGGTTGCGTTGCCGCCAG
CAACACGCCCAACAGCTTTCTTTCTTTGCGCTTCGGCCGAAAAACAGCAA
AGCGAGGTGTACAGCAGTACATGTATATCAAAGTCGAAGCGCTGAGAGCG
CGGGTGAACATTGATATTTTGTTGTTAATTCAATTAATAAGTTAATGGGT
AAAAGACGACGAAAAAGACAGACAGGTGGACAAACCAAAACCACTTGCTT
GCGTCACCGTTCCCGTTGAATTATGAGAAAAAAAGCCGCCCCAAAACGTC
AGTATTTCCGAGCCAGTTCTTGTTTCCATAACGTGTGGGACAAATCAGTG
GCATCACCTCCCGCTGCCGGTGTCGGCCATTCCCCCCTTACTCGGCAAGC
CTCATATTTTTATTAATACTTTTTTTATCAGAGAACGGAAAAAGAAGAAA
GCAACTGGTGGTACCTAGTATGGAGTATATAACTCCATCCAACGCGAGAG
ACAAGACAAGACACCACGCACCAAATCAGGCACAAACAAAAAAACCAAGC
CAGTTGTTGAACTACCAAAAGCCATTGCATTGCGTGCACGGTTCGGTGGT
GGTTGTACGGAGAAGAACAACACAAGAAAACGCCACCAATGAAGCCACAC
TAAATAAAGAGACCTAAAATATAAAATATAAAATAAAATAAAACACTTCC
AATGAAAAATCCGAACTCTCATCTACTGGCTAGGATGCAATGAGCGGTCA
ACGCCGGATCAGGGTGCGGCACTTGAGTTGACACTCGCAGAAGTCCGGTG
TACGTATCGGAAAACATCCTCTCGAGCGATAGAGCAGAGAAATCCACGCA
CACACCCCTTTCCGCCCATAAAGCACGCAAACGAGCACCCGGCGAGCAGG
CATACAACACGCCAAAAAAGAGCAACAACCACAACTACGCATGCAGCACC
CCGGTATATCTTGAGGACGTTCGAAAGCGAACATGGCATGGTACGCCAAA
AAAGAGCAACAACCACAACTACGCATGCAGCACCCCGGTATATCTTGAGG
ACGTTCGAAAGCGAACAGGGCATGGCATCCGCGGGTCGAACAGCACTCAC
TCGCAGCCCTCATCAATCGGAGGGTGAAAAAACGAAACACATTCATCAGT
TTTCTGATCACAGCGATGTAGCCAAATATCAATAGCACAAAATACACGAC
AGTTAACAGCTGGCTCCCGGCCAACAAAGATCTCCTCCTCCTTCACTGAG
TGGCACTCGTGCGAGGCGAATGACACAACGAACGATCCTGTCCCGCTGCC
TGCCTGCCTGCCCCGCCCCACAACCGAGAATTCTCATCATATTCCACCAA
CTTGTCCAACAGCAGCAAACAGAGTGCAGCAGCGGCAAAGCGTATCCTAC
AAAGGACAAAAGCCCCCAAAAGCACCCGTGGTCGCTGATGACGTTTACCC
GCCCCGCCCACCCCGCGGTCTATGAT back to topCoding sequence (CDS) from alignment at C-linearis_contig98:574857..582482+ >mRNA_C-linearis_contig98.17142.1 ID=mRNA_C-linearis_contig98.17142.1|Name=mRNA_C-linearis_contig98.17142.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2022bp|location=Sequence derived from alignment at C-linearis_contig98:574857..582482+ (Chordaria linearis ClinC8C monoicous) ATGCGCTTCGCAAGCTTGCTGCTGGCACACGTAGTGGTGGCGGTTGTGGC CACACACGGCGGTGGAAGCACGACGAAATCCGAAATTCGAAGAGGTCGCG AAGTATCCACAGCAGCAGCTGTAGTAGGGCGCAGCGTACCGACTTCCGAT AGCAGCCCACACGGTAATGCGGCTCTACGTAGATCACCAGCACCAGCTAT GTGTTCATCGTCGTCTCCGCGAGGAGCGCGAGAAATTGCAAGCCGGAGAC GGAAAACTTCATCAAATCCCCACCGCCGCTTGAAAGCTCTTCCACCGCAA CCGCCGCCGCTATGGTTGCTTCGGGGTGGGGGATCTACTGCTACGCGACG GGAAGAGAGACGGGCGTACGAGGAGCACCAGCGAGTGAGAAATGTGCTGC TGTACTACCCAAACCTGATAGATGCGCTTCGCAAGCTTGCTGCTGGCACA CGTAGTGGTGGCGGTTGTGGCCACACACGGCGGTGGAAGCACGACGAAAT CCGAAATTCGAAGAGGTCGCGAAGTATCCACAGCAGCAGCTGTAGTAGGG CGCAGCGTACCGACTTCCGATAGCAGCCCACACGGTAATGCGGCTCTACG TAGATCACCAGCACCAGCTATGTGTTCATCGTCGTCTCCGCGAGGAGCGC GAGAAATTGCAAGCCGGAGACGGAAAACTTCATCAAATCCCCACCGCCGC TTGAAAGCTCTTCCACCGCAACCGCCGCCGCTATGGTTGCTTCGGGGTGG GGGATCTACTGCTACGCGACGGGAAGAGAGACGGGCGTACGAGGAGCACC AGCGAGTGAGAAATGTGCTGCTGTACTACCCAAACCTGATAGGCTACGCG AGAATAGCCCTGGTGCTAACGAGCTACTACCTCGCGGAGACCAACTGGAA AGCAAGGCTACGCGAGAATAGCCCTGGTGCTAACGAGCTACTACCTCGCG GAGACCAACTGGAAAGCAAGCATGGGGTTCTACCTGGTGGCCTTCGCGGG GGACGCTGTTGACGGACACATCGCGCGCGCCTTCAACCAAGCATGGGGTT CTACCTGGTGGCCTTCGCGGGGGACGCTGTTGACGGACACATCGCGCGCG CCTTCAACCAAGCCTCGCGGTTCGGCGCGGTGTTGGACATGGTGACGGAT CGGTGCTCGACGGCGGGGCTGCTGCTGGTGCTGTCCCGGCTGTACGGGCG GCTTCACGCCTTCGCCTTCCTCGTCCTCATGTTCGTCGACCTCTTCAGCC ACTGGATGCACACGCACAGCCTCGCGGTTCGGCGCGGTGTTGGACATGGT GACGGATCGGTGCTCGACGGCGGGGCTGCTGCTGGTGCTGTCCCGGCTGT ACGGGCGGCTTCACGCCTTCGCCTTCCTCGTCCTCATGTTCGTCGACCTC TTCAGCCACTGGATGCACACGCACAGCGTTGTCGACGAACATCACAAGTC CACGACCGCTCTCAGGCGGAGGAACTTCTTAGTCCGCAAATACTACGACC ACCTTCCCTTCTTCGCCTTCTGCTGCATCGCGTTGTCGACGAACATCACA AGTCCACGACCGCTCTCAGGCGGAGGAACTTCTTAGTCCGCAAATACTAC GACCACCTTCCCTTCTTCGCCTTCTGCTGCATCGGCACCGAGCTGTTCTA CGTGCTGCTTTACCTCCTGCACTTCGTGTCCAAGCAGTCTAGGGCCTTCC CACTGCTTCGCAAGGCACCGAGCTGTTCTACGTGCTGCTTTACCTCCTGC ACTTCGTGTCCAAGCAGTCTAGGGCCTTCCCACTGCTTCGCAAGTTGTGC TTCTGGCTATGCCTGCCGTCGTGCGTCCTGAAGCAGTTCATCAACATTGC CCAGATCTTCTCTGCCGCACAGACTCTGGCCCTTGAGGAGCTGGACCAAA ATATTTAATTGTGCTTCTGGCTATGCCTGCCGTCGTGCGTCCTGAAGCAG TTCATCAACATTGCCCAGATCTTCTCTGCCGCACAGACTCTGGCCCTTGA GGAGCTGGACCAAAATATTTAA back to top
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