prot_C-linearis_contig98.17137.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig98.17137.1
Unique Name	prot_C-linearis_contig98.17137.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	153

Homology

[Close]

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match: D8LJU6_ECTSI (Yellow cameleon 2.60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU6_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 1.420e-80
Identity = 134/151 (88.74%), Postives = 137/151 (90.73%), Query Frame = 0

Query:    2 ATKTTKELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXIEEFISFMYS 152
            A KTTKELS+EEIEDYKEAFSNFDKDGNGNIDE ELGVVMRSLGYSPTNQQLKEMMAKVDTD SGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTP+ELAEIMRGLGDKLSDDE        XXXXXX   I+EFISFMYS
Sbjct:    4 AAKTTKELSEEEIEDYKEAFSNFDKDGNGNIDELELGVVMRSLGYSPTNQQLKEMMAKVDTDQSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPAELAEIMRGLGDKLSDDEIELLVKVAXXXXXXVISIDEFISFMYS 154

[Close]

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match: A0A6H5JMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF0_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 3.350e-68
Identity = 109/124 (87.90%), Postives = 117/124 (94.35%), Query Frame = 0

Query:    2 ATKTTKELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDE 125
            A  TTKELS+EEIEDYKEAFSNFDKD +GNIDE ELGVVMRSLGYSPTN+QLKE+MAKVDTDG+GGISF+EFVAMMQLGEVETDF KEINEAFKFFDKDGDGEVT +ELAEIMRGLGD L+DDE
Sbjct:   67 AATTTKELSEEEIEDYKEAFSNFDKDCSGNIDESELGVVMRSLGYSPTNEQLKEIMAKVDTDGNGGISFEEFVAMMQLGEVETDFKKEINEAFKFFDKDGDGEVTRAELAEIMRGLGDTLTDDE 190

[Close]

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match: A0A835YUT0_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT0_9STRA)

HSP 1 Score: 156 bits (395), Expect = 3.600e-46
Identity = 78/119 (65.55%), Postives = 94/119 (78.99%), Query Frame = 0

Query:    7 KELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDE 125
            +E ++EE+EDY+EAF+NFDKD +G IDE ELG VMRSLGY+PT++QL +MM KVD DG+G ISFDEFV MM+  EVETDF +EI EAFK FDKDG G +   EL  IM+GLG  LSD E
Sbjct:   10 REATEEELEDYREAFNNFDKDQSGEIDEYELGTVMRSLGYNPTDEQLHDMMLKVDIDGNGSISFDEFVIMMRKCEVETDFDREITEAFKVFDKDGSGSIDKEELTAIMKGLGANLSDQE 128

[Close]

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match: D7G0X3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0X3_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 5.480e-45
Identity = 77/144 (53.47%), Postives = 101/144 (70.14%), Query Frame = 0

Query:    9 LSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXIEEFISFMYS 152
            LS+E++ D KEAF NFD++G+G ID  EL  V+RSLGYSPT  QLK++M KVD DG+G ISF+EFV +M++G +ETD+ KEIN AF FFDK+GDG+V   ELAEI R LGD L+D E                 ++EF++FM+ 
Sbjct:   15 LSEEDVADLKEAFDNFDRNGDGTIDSVELATVLRSLGYSPTKDQLKKLMDKVDLDGTGDISFEEFVVLMRVGGMETDYEKEINGAFSFFDKNGDGQVDRQELAEIARALGDSLTDAEIYLLINAAHKDRDATISMKEFVTFMFD 158

[Close]

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match: D8LH46_ECTSI (Calmodulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH46_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 3.900e-43
Identity = 79/146 (54.11%), Postives = 97/146 (66.44%), Query Frame = 0

Query:    7 KELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXIEEFISFMYS 152
            K+L+ EE+ED KE F  FDKDG+G ID  EL  VM SLGYSPTN+QL++MMAKVD DG+G I+F EFV MM+  +V+TDF ++I EAFKFFD+DG G +   EL  IMR LG KL+D E                 I EF+  MYS
Sbjct:   10 KDLTGEEVEDLKETFRTFDKDGSGEIDLDELRTVMTSLGYSPTNKQLEDMMAKVDLDGNGLINFAEFVTMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGNIMRQLGAKLTDSEINLLVQEADVDGDGQVDINEFLKIMYS 155

[Close]

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match: A0A835YVF8_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF8_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.400e-42
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 0

Query:    9 LSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXIEEFISFMYS 152
            L+ EE+EDY+EAF NFDKDGNG ID  ELG+VMRSLGYSPT++QL++M+ +         +F+EFV MM+  E+ TDF  EI  AF+FFDKDGDG++T  ELA +MRGLG  LSD E                 + EF +F+YS
Sbjct:    8 LTKEEVEDYEEAFKNFDKDGNGEIDLKELGIVMRSLGYSPTDKQLRDMLKQAXXXXXXXXTFNEFVEMMRRCELSTDFEMEIKGAFEFFDKDGDGDITSEELASVMRGLGANLSDQEIALLVKEADKNGDGAISLHEFTTFLYS 151

[Close]

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match: A7SRU7_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SRU7_NEMVE)

HSP 1 Score: 129 bits (324), Expect = 1.970e-35
Identity = 71/145 (48.97%), Postives = 100/145 (68.97%), Query Frame = 0

Query:    8 ELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXIEEFISFMYS 152
            +L++EEI +YKEAFS FDKDG+G +   ELG VMR+LG +PT+++++EM+ +VD DGSG I F+EF+ +M        +  E+  AF+ FDKDG+G +T +EL E++  LG+KLS+DE        XXXXXX   IEEFI  M +
Sbjct:    4 DLTEEEIAEYKEAFSLFDKDGDGTVTTAELGTVMRNLGQNPTDEEIREMIKEVDEDGSGSIGFEEFLQLMSKKTKGKSYEDELMAAFQIFDKDGNGSITVTELKEVLDSLGEKLSEDEVGEMIKEAXXXXXXTVNIEEFIKMMVA 148

[Close]

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match: A0A7S3PSQ8_9STRA (Calmodulin n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S3PSQ8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 7.060e-35
Identity = 68/145 (46.90%), Postives = 92/145 (63.45%), Query Frame = 0

Query:    8 ELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXIEEFISFMYS 152
            +L++E+I ++KEAFS FDKDG+G I   ELG VMRSLG +PT  +L +M+ +VD DG+G I F EF+ MM     +TD  +EI EAFK FDKDG+G ++ +EL  +M  LG+KL+DDE                  EEF+  M S
Sbjct:    4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELNDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHVMTNLGEKLTDDECDEMIREADIDGDGQINYEEFVKMMLS 148

[Close]

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match: A0A835Z1Q3_9STRA (Calmodulin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q3_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.220e-34
Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 0

Query:    2 ATKTTKELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMR 115
            A+   +EL+ EE++DYKEAF NFDKDGNG IDE EL  VMRSLGY+PT++QL +MM  +D DG+      EFV MM+  EVETDF +E+ EAF+ FD+DG G +  +EL  IM+
Sbjct:    6 ASSEMRELTQEELDDYKEAFDNFDKDGNGEIDEIELSTVMRSLGYNPTDEQLHDMMLNIDLDGN------EFVTMMRKCEVETDFDREVREAFQVFDRDGSGAIDKAELTVIMK 113

[Close]

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Match: A0A6J0JA04_9PASS (calmodulin, striated muscle n=8 Tax=Neognathae TaxID=8825 RepID=A0A6J0JA04_9PASS)

HSP 1 Score: 127 bits (318), Expect = 1.420e-34
Identity = 65/142 (45.77%), Postives = 94/142 (66.20%), Query Frame = 0

Query:    9 LSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTNQQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDDEXXXXXXXXXXXXXXXXXIEEFISFM 150
            LS+E+I ++KEAFS FD+DG+G+I   ELG VMRSLG +PT  +L++M+ +VDTDGSG + F EF+++M     +TD  +EI EAF+ FDKDG+G ++ +EL  +M  LG+KL+D+E                  EEF+  M
Sbjct:    5 LSEEKIAEFKEAFSLFDRDGDGSITTRELGTVMRSLGQNPTEAELRDMVGEVDTDGSGTVDFPEFLSLMARRMRDTDGEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADCNNDGQVNYEEFVRMM 146

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot

BLAST of mRNA_C-linearis_contig98.17137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LJU6_ECTSI	1.420e-80	88.74	Yellow cameleon 2.60 n=1 Tax=Ectocarpus siliculosu...	[more]
A0A6H5JMF0_9PHAE	3.350e-68	87.90	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YUT0_9STRA	3.600e-46	65.55	Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID...	[more]
D7G0X3_ECTSI	5.480e-45	53.47	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LH46_ECTSI	3.900e-43	54.11	Calmodulin n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A835YVF8_9STRA	1.400e-42	52.08	Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID...	[more]
A7SRU7_NEMVE	1.970e-35	48.97	Predicted protein n=1 Tax=Nematostella vectensis T...	[more]
A0A7S3PSQ8_9STRA	7.060e-35	46.90	Calmodulin n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7...	[more]
A0A835Z1Q3_9STRA	1.220e-34	56.14	Calmodulin n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A6J0JA04_9PASS	1.420e-34	45.77	calmodulin, striated muscle n=8 Tax=Neognathae Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 52..80 e-value: 1.1E-6 score: 38.2 coord: 16..44 e-value: 1.7E-5 score: 34.2 coord: 125..152 e-value: 3.2 score: 13.7 coord: 89..117 e-value: 1.2E-7 score: 41.4
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 15..78 e-value: 1.6E-14 score: 54.1 coord: 88..150 e-value: 8.0E-16 score: 58.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 121..152 score: 10.803
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 48..83 score: 14.262
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 12..47 score: 15.546
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 85..120 score: 15.406
None	No IPR available	GENE3D	1.10.238.10		coord: 1..82 e-value: 4.9E-29 score: 102.5 coord: 83..152 e-value: 2.4E-22 score: 80.9
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 9..151
None	No IPR available	PANTHER	PTHR23050:SF376	CALMODULIN-2-RELATED	coord: 9..151
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 134..146
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 98..110
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 25..37
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 4..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig98	contig	C-linearis_contig98:492864..495206 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig98.17137.1	mRNA_C-linearis_contig98.17137.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig98 491324..498392 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig98.17137.1 ID=prot_C-linearis_contig98.17137.1|Name=mRNA_C-linearis_contig98.17137.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=153bp
MATKTTKELSDEEIEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTN
QQLKEMMAKVDTDGSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKD
GDGEVTPSELAEIMRGLGDKLSDDEINLLVKVADKDGDGTISIEEFISFM
YS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair