prot_C-linearis_contig98.17136.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig98.17136.1
Unique Nameprot_C-linearis_contig98.17136.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length471
Homology
BLAST of mRNA_C-linearis_contig98.17136.1 vs. uniprot
Match: D8LJU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU7_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.790e-55
Identity = 199/476 (41.81%), Postives = 245/476 (51.47%), Query Frame = 0
Query:    1 MPSSSNRLLNLFQLELKEGSSSSASRAPSHGANSAD-PVKSD-PSRTKRTRESITLEKSDFVSPLEDHDEIADAAARRTTKTRVXXXXXXXXXXLREQLKFQGAVLDQLSGEVYKLERMAAAVNEGPHDTWDESKPDEQDTHKRAKDQPNKELNCAVRGEDEDGPEGLLVKSVRQESRGESEGRDDLR---------DGSLEHGQNEEEDDAGGSSEGDPGKKHASASVSNRP------GRRGEPLDEHTNKGPELPGMVSGEQLSPPQQAALQRSLP--KSPAGNCKARNEEPVASEG-AQLRSELREARSLAERIRGELSAAQQMAEEDNMSHVTLLARERKFRAAIEAGLREKVHIMRRRARDREERLSAELSSARAQLRETVDLLATKEEEACSARTRWAQQEEIAAATLAKNKERERHASWLERRLEEVSSVEATAAALRLEEMTAVLESQQRELELLRPSKRPIPSAREH 456
            MPSS NRLL+LF+ E ++ S SS  RAPSHGAN+A+  VK D P  TK       ++  + V       E A A A   T+ RV          LREQLKFQGAVLDQL+G+V+ LE  A     G              TH R     N+E    +R   ++G        V QE++       D+          DG   HG+    D+       D           N P       R     D H    P+ P   + + +       L++ LP   SP G       EP + +    LRSELR AR L ERIRG+ +AAQ+ AEE   SH+ LL+RERKFRA +EAGLREKVH MR+RARDREERLSAELSS +AQL+E VDLLATKE                     A+ KER+R  SWLERRL+EVSS E +AA LRLEEMTA LE+QQ+ELE LR S R + S   H
Sbjct:    1 MPSS-NRLLDLFRSE-QDVSPSSMGRAPSHGANNANNSVKQDLPQVTKGRAGYGNVQGIEVV-------ETAVAFAAGGTRPRVETKLERENAHLREQLKFQGAVLDQLAGDVHTLELKAVGAASGA-------------THLRPSPIHNQEATDVLREGPKNGMSQGQKDEVHQENQEAGARCPDMCKGGTQGAHIDGEDPHGEVRNVDERDTFQPQDTADDLGQGHRGNTPPTPVQHARDESACDPHEK--PDFPLETASDHV-------LRKVLPTSSSPTGG------EPDSGDNDTDLRSELRAARLLTERIRGDFAAAQKAAEEKEQSHIGLLSRERKFRATVEAGLREKVHSMRQRARDREERLSAELSSVKAQLKEAVDLLATKEXXXXXXXXXXXXXXXXXXXXXARGKERDRQMSWLERRLQEVSSGETSAATLRLEEMTAALEAQQQELERLRASAREVESHYNH 439          
BLAST of mRNA_C-linearis_contig98.17136.1 vs. uniprot
Match: A0A6H5KMY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMY3_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 2.930e-45
Identity = 195/519 (37.57%), Postives = 244/519 (47.01%), Query Frame = 0
Query:   25 SRAPSHGANSADPVKSDPSRTKRTRESI-TLEKSDFVSPLEDHDEIADAAARRTTKTRVXXXXXXXXXXLREQLKFQ----------------------GAVLDQLSGEVYKLERMAAAVNEGPHDTWDESKPDEQDTHKRAKDQPNKELNCAVRGEDEDGPEGLLV---KSVRQESRGESEGRDDLRDGSLEHGQNEEEDDAG------------------GSSEGDPGKKHASASVSNRPGRRGEPLDEHTNKGPELPGMVSGEQLSPPQQAALQRSLPKSPAGNCKARNEEPVASEGAQLRSELREARSLAERIRGELSAAQQM---AEEDNMSHVTLLARERKFRAAIEAGLREKVHIMRRRARDREERLSAELSSARAQLRETVDLLATKEEEAC------------SARTRWAQQEEIAAATLAKNKERERHASWLERRLEEV----------------------------------SSVEATAAALRLEEMTAVLESQQRELELLRPSKRPI 450
            SRAPSHGAN+A+ VK D  R  + R     +   + V P       A A A   T+  V          LREQLKFQ                      GAVLDQL+G+V+ LE  AAA   G              TH R     N+E    V  E   G EG+       V QE+    E   D+ +G  +  Q + ED  G                    ++G  G    ++    R     +P ++     P+ P   + +Q+   ++  L  S   SPAG      E         LRSELR AR L ERIRG+ +AAQ+    AEE   SH+ LL+RERKFRA +EAGLREKVH MRRRARDREERLSAELSS +AQL+E +DLLATKE+E              S R R A+QE+  +A LA+ KER+R  SWLERRL+EV                                  SS E +AA LRLEEMT VLE+QQ+ELE LR S R +
Sbjct:    7 SRAPSHGANNANSVKQDLPRVTKGRAGYGNVHGIEVVEP-------AVAFAAGGTRPPVATKLERENAHLREQLKFQVPGLLSHVNRYATSITPFLLMQGAVLDQLAGDVHTLELKAAAAASGA-------------THLRPSPIHNQEAKDVVL-EGPVGSEGMAQGPKDEVHQENHEAGERCPDMSEGGTQGAQIDGEDPHGELRDVDERYVIQRKDTADDLAQGHRGNTPPTSVQHERVESARDPYEK-----PDCPIETASDQVL--REVVLASS---SPAGG-----ERDSGDNKTDLRSELRAARLLTERIRGDFAAAQKALPRAEEKEQSHIDLLSRERKFRATVEAGLREKVHSMRRRARDREERLSAELSSVKAQLKEAMDLLATKEDELTKKLRNISPYKVRSMRARNAEQEDRTSAALARGKERDRQMSWLERRLQEVDSSASPLQFLAKDTFYTCQIKAQLNGARRKTCLVSSGETSAATLRLEEMTVVLEAQQQELERLRASAREV 489          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJU7_ECTSI2.790e-5541.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMY3_9PHAE2.930e-4537.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 341..375
NoneNo IPR availableCOILSCoilCoilcoord: 76..110
NoneNo IPR availableCOILSCoilCoilcoord: 287..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig98contigC-linearis_contig98:487236..490974 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig98.17136.1mRNA_C-linearis_contig98.17136.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig98 487236..490974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig98.17136.1 ID=prot_C-linearis_contig98.17136.1|Name=mRNA_C-linearis_contig98.17136.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=471bp
MPSSSNRLLNLFQLELKEGSSSSASRAPSHGANSADPVKSDPSRTKRTRE
SITLEKSDFVSPLEDHDEIADAAARRTTKTRVKTKLERENEQLREQLKFQ
GAVLDQLSGEVYKLERMAAAVNEGPHDTWDESKPDEQDTHKRAKDQPNKE
LNCAVRGEDEDGPEGLLVKSVRQESRGESEGRDDLRDGSLEHGQNEEEDD
AGGSSEGDPGKKHASASVSNRPGRRGEPLDEHTNKGPELPGMVSGEQLSP
PQQAALQRSLPKSPAGNCKARNEEPVASEGAQLRSELREARSLAERIRGE
LSAAQQMAEEDNMSHVTLLARERKFRAAIEAGLREKVHIMRRRARDREER
LSAELSSARAQLRETVDLLATKEEEACSARTRWAQQEEIAAATLAKNKER
ERHASWLERRLEEVSSVEATAAALRLEEMTAVLESQQRELELLRPSKRPI
PSAREHQHQHQHQQEEKQRDT
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