prot_C-linearis_contig98.17134.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig98.17134.1
Unique Nameprot_C-linearis_contig98.17134.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length406
Homology
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BLAST of mRNA_C-linearis_contig98.17134.1 vs. uniprot
Match: D8LJU2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU2_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 2.410e-22
Identity = 72/185 (38.92%), Postives = 82/185 (44.32%), Query Frame = 0 
Query:    1 MVYQRA----------GGRERCVGCGFGKGQFQVQY-DDDRDGSGRGYCSLDCYTSAKVTGRNLQTQQSRGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPWPTGFLVDAPPSPKPWRGRTL----SQDNMSWRTV-----STGNLSVA-----DESFSQSSVADWHGADSEDGETSIGSG 160
            MVYQR           G RERC GCG+G GQFQV+Y  +D DG GRGYCSLDCYTSAK                                                  G L+DAPP PKPWR   +     Q ++ W +      STG          D S  +SSVADW   DSEDGETS+GSG
Sbjct:    1 MVYQRTASPAQFSSGRGSRERCRGCGYGLGQFQVEYASNDDDGLGRGYCSLDCYTSAK--------------------------------------------------GLLLDAPPEPKPWRRTAIMSRRQQRDLGWTSTVLPGSSTGTFGAGGAAGDDTSSQESSVADWQTVDSEDGETSVGSG 135
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BLAST of mRNA_C-linearis_contig98.17134.1 vs. uniprot
Match: A0A6H5KT65_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT65_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 9.660e-18
Identity = 48/74 (64.86%), Postives = 51/74 (68.92%), Query Frame = 0 
Query:    1 MVYQRA----------GGRERCVGCGFGKGQFQVQY-DDDRDGSGRGYCSLDCYTSAKVTGRNLQTQQSRGRGG 63
            MVYQR           G RERC GCG+G GQFQV+Y  +D DG GRGYCSLDCYTSAKVTGR LQ  Q R RGG
Sbjct:    1 MVYQRTASPAQSSSGRGSRERCRGCGYGLGQFQVEYASNDDDGLGRGYCSLDCYTSAKVTGRALQ-HQPRARGG 73
[Close]
BLAST of mRNA_C-linearis_contig98.17134.1 vs. uniprot
Match: A0A6H5KTY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY8_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.130e-8
Identity = 40/83 (48.19%), Postives = 48/83 (57.83%), Query Frame = 0 
Query:   92 PQP--WPTGFLVDAPPSPKPWRGRTL----SQDNMSWRTV-----STGNLSVA----DESFSQSSVADWHGADSEDGETSIGS 159
            PQP  WPTG L+DAPP PKPWR   +     Q ++ W +      STG    +    D S  +SSVADW   DSEDGETS+GS
Sbjct:   11 PQPLSWPTGLLLDAPPEPKPWRRTAIMSRRQQRDLGWTSAVLSGNSTGTFGASAAGDDTSSQESSVADWQTVDSEDGETSVGS 93
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJU2_ECTSI2.410e-2238.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KT65_9PHAE9.660e-1864.86Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KTY8_9PHAE1.130e-848.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig98contigC-linearis_contig98:477172..481181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig98.17134.1mRNA_C-linearis_contig98.17134.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig98 477172..481250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig98.17134.1 ID=prot_C-linearis_contig98.17134.1|Name=mRNA_C-linearis_contig98.17134.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=406bp
MVYQRAGGRERCVGCGFGKGQFQVQYDDDRDGSGRGYCSLDCYTSAKVTG
RNLQTQQSRGRGGDGGGMLYNQQHRRGAGGGGGARGHGGGGPQPWPTGFL
VDAPPSPKPWRGRTLSQDNMSWRTVSTGNLSVADESFSQSSVADWHGADS
EDGETSIGSGNGSGSGNGSGSGSAGDAIVRGGVGVAAADGLPSQQQQQQG
PPRNNNDNLGNLGNHRYDGDGSGSGGSAARRNGGSGGTIAPPLGGGNRNN
GEAVHHGGGQMDHRLEKGDSSGNGDGDSGSMGFAGAGQPAAGVAGATRGE
AATHRPPLVPFAPIPRLRAFPAQRRIHGTYGPGADGDSGGGGRKVPGRTV
AFAAPPAQASPPRRPPGVGRGGAVVDVLPLRPRPVAAAAGRQQPVEAAAA
AGVCGG
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