mRNA_C-linearis_contig98.17130.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig98.17130.1
Unique NamemRNA_C-linearis_contig98.17130.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Match: A0A6H5KEG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG0_9PHAE)

HSP 1 Score: 493 bits (1269), Expect = 8.530e-155
Identity = 477/813 (58.67%), Postives = 517/813 (63.59%), Query Frame = 1 
Query:  799 AATLVRSDQDSGMALVKSKDGRTKWLTVSTDPSSSS-GITWDERVRTWASMLGVCAAPPSPCHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKNKIAAAAGDQRCTAPTAEVXXXXXXXXXXXXXXSSSGKRVGVGSFARGFLLGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----ALEREDVPAVEGAGDQDVTIGE---------LPPSP----APAGADGGGLIGRSRWVKGAPPSPSPSDGSDSSGRNHGGTSSKEGKREGGGGLSAGDRGGVPSCATTAATLDNAADCAGEAAVPTATVSPDDMDWLETGPGGSSNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVKKEVAFGHVNLLEFTRDVGGCGVPSDGTWGLALGLPFRETVVDVDGYEASKAEILEERSRDLAKKQRHLSTGETRQFDYRPVGEKNPLFARLGEKERRHVAKK-LLEYACFHKADLEEADRXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLSEFDAYSHKVSHAEFVDKSQEASVELTALRDSRRANQGCSCSCVRADKLNTTKLRGELSKR--GLKASGSKAKKELVKMLQEAMRQEEEQNGGKALKACRSDECQCVRDGVECHADLCNCCKGPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHRAPFVTSKVVPGREKG--HGRSDYICS 3165
            AATLVRSDQDSGMALVKSKDGRTKWLTVSTDP+S+    TWDERVRTWASMLGVCA       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         +      A TA                 ++GKRVG  SFARGFLLGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXX                  A      P    AG+  +   E         +P +P    A AGADG     R RWVKGAPPS                                                       G+A         + M+WLETGPGG+  +            XXXXXXXXXXXXXXXXXXXXXXX                                                               K  V+FG VNL+EFTRDVGGCGVPSDGTWGLALGLPFRETVVDVDGYEAS+ EILEER+ +L++KQRHLSTGETRQFDYRPVGEKNPLF RLGEKERRHV+ K LL+YACFHK+DLEEADR                           K  S+FDAYSHKVSHA+FVDKSQEASVELTALRDSR+ +QGCSCS VR DKLN  KLR EL+KR  GLKASGSK  K+LVK+LQEAMRQ+EE+NGGKALK CRS+ECQCV+DGVECHADLC+CCKGPSIGEKDAHHGGNCGNP  VYAYSSSVVRSHR P+VTSKVVPG+E+G  HGRSD +CS
Sbjct:   14 AATLVRSDQDSGMALVKSKDGRTKWLTVSTDPTSTPPSTTWDERVRTWASMLGVCAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRVGVAASTARRKPV------------ATGKRVG--SFARGFLLGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGNAPAHAAGKGSGAVVAPASTLPPQTREAGEASILQDERDGGDDMAVVPSTPVETMAVAGADGVTGGRRQRWVKGAPPSXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXGGDA---------EGMEWLETGPGGNVAAKANSGGTKTIGGXXXXXXXXXXXXXXXXXXXXXXXAKPTKNASSSLPSVAAENKTASTQPMLQSSSGQQEPCRTLNGAAAGRIKAKRAKGGK------KLSVSFGRVNLVEFTRDVGGCGVPSDGTWGLALGLPFRETVVDVDGYEASRTEILEERTSELSRKQRHLSTGETRQFDYRPVGEKNPLFYRLGEKERRHVSVKILLDYACFHKSDLEEADRDNEAVQTPDDSAGASDNNSHIDGSGG-KSTSDFDAYSHKVSHADFVDKSQEASVELTALRDSRQNSQGCSCSHVRPDKLNLAKLRAELTKRRVGLKASGSK--KDLVKVLQEAMRQDEEKNGGKALKVCRSEECQCVQDGVECHADLCSCCKGPSIGEKDAHHGGNCGNPEGVYAYSSSVVRSHRGPYVTSKVVPGKERGGGHGRSDSVCS 791
[Close]
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Match: D8LJU8_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU8_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 1.060e-153
Identity = 248/329 (75.38%), Postives = 275/329 (83.59%), Query Frame = 1 
Query: 2185 KKEVAFGHVNLLEFTRDVGGCGVPSDGTWGLALGLPFRETVVDVDGYEASKAEILEERSRDLAKKQRHLSTGETRQFDYRPVGEKNPLFARLGEKERRHVAKKLLEYACFHKADLEEADRXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLSEFDAYSHKVSHAEFVDKSQEASVELTALRDSRRANQGCSCSCVRADKLNTTKLRGELSKRGLKASGSKAKKELVKMLQEAMRQEEEQNGGKALKACRSDECQCVRDGVECHADLCNCCKGPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHRAPFVTSKVVPGREKG--HGRSDYICS 3165
            K  V+FG VNL+EFTRDVGGCGVPSDGTWGLALGLPFRETVVDVDGYE S+ EILEER+ +L++KQRHLSTGETRQFDYRP+GEKNPLF RLGEKER   +KKLL+YACFHK+DLEEADR                           KG S+FDA+SHKVSHA+FVDKSQEASVELTALRDSR+ +QGCSCS VR DKLN  KLR EL+KRGLKASGSK  K+LVK+LQEAMRQ+EE+NGGKALK CRS+ECQCV+DGVECHADLC+CCKGPSIGEKDAHHGGNCGNP  VYAYSSSVVRSHR P+VTSKVVPGR +G  HGRSD +CS
Sbjct:  204 KLSVSFGRVNLVEFTRDVGGCGVPSDGTWGLALGLPFRETVVDVDGYETSRTEILEERTSELSRKQRHLSTGETRQFDYRPMGEKNPLFYRLGEKER---SKKLLDYACFHKSDLEEADRDNEAVQTPDDSADANDNNSHINGSGG-KGTSDFDAFSHKVSHADFVDKSQEASVELTALRDSRKNSQGCSCSYVRPDKLNLAKLRAELTKRGLKASGSK--KDLVKVLQEAMRQDEEKNGGKALKVCRSEECQCVQDGVECHADLCSCCKGPSIGEKDAHHGGNCGNPEGVYAYSSSVVRSHRGPYVTSKVVPGRVRGGGHGRSDSVCS 526
[Close]
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Match: A0A836CPQ0_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPQ0_9STRA)

HSP 1 Score: 159 bits (402), Expect = 8.950e-38
Identity = 117/326 (35.89%), Postives = 167/326 (51.23%), Query Frame = 1 
Query: 2188 KEVAFGHVNLLEFTRDVGGCGVPSDGTWGLALGLPFRETVVDVDGYEASKAEILEERSRDLAKKQRHLSTGETRQFDYRPVGE-KNPLFARLGEKERRHVAKKLLEYACFHKADLEEADRXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLSEFDAYSHKVSHAEFVDKSQEASVELTALRDSRRANQGCSCSCVR-ADKLNTTKLRGELSKRGLKASGSKAKKELVKMLQEAMRQEEEQNGGKALKACRSDECQCVRDGVECHADLCNCCK--GPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHRAPFVTSKVVPGREKGHGRSD 3153
            K   FG V ++E  RDVGGCGVPSDG+WGLALG     T + ++ +E+ +A  L ER+  L+K++R L  GETRQ+DY+ +   KNPLF RL E+ER+ +   LL        + EE +                              L E+ + S      EF ++S++   EL  LR +R +N GCSC+ ++  DKL+  +++ EL  RGL A G K+  EL + L+ A+        G AL  C +  C+C R+G++C AD+C CC                 C N   VYAY  + V  +RAPFVT++ V   E  HG  D
Sbjct:  170 KAFRFGAVRVIECHRDVGGCGVPSDGSWGLALGDKIGVTAMSLEAHESLRAARLAERASHLSKRERKLCRGETRQWDYKGIDYGKNPLFGRLSERERKEL---LLTSVA---GEGEEGE------------------------------LGEYHSLS-----TEFAERSRDLCKELDHLRHARASNGGCSCAPIKNIDKLSLARIKEELRARGLPAQGPKS--ELARALRGAV--------GAAL--CDTKNCECARNGLQCQADVCRCCACGXXXXXXXXXXXXXKCANALGVYAYKEAKVTQYRAPFVTARPV---EWDHGACD 439
[Close]
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Match: A0A3M6VHY3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHY3_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.150e-24
Identity = 102/314 (32.48%), Postives = 148/314 (47.13%), Query Frame = 1 
Query: 2185 KKEVAFGHVNLLEFTRDVGGCG-VPSDGTWGLALGLPFRETVVDVD-----GYEASKAEILEERSRDLAK-KQRHLSTGETRQFDYRPVGEKNPLFARLGEKERRHVAKKLLEYACFHKADLEEADRXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLSEFDAYSHKVSHAEFVDKSQEASVELTALRDSRRANQGCSCSCV--RADKLNTTKLRGELSKRGLKASGSKAKKELVKMLQEAMRQEEEQNGGKALKACRS--DECQCVRDGVECHADLCNCCKGPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHR 3093
            KK + +G V++ EF R  GG G VP DGTW L LG      V DVD       E  + ++L+ER++ L+K K+R +  GETRQFDY+  G +NPLFARL E ER+ V   +LE     +  +E                               + + EF      ++  +F   S E   E   +RDSR    GCSC  +  +  K+N  KLR  L +R +   G+  K EL+   ++  R++         K C+S   +C+C R+GV CH+D+C  C G            +C NP   Y Y S+ V+ +R
Sbjct:   41 KKHIMWGGVSVREFARFPGGGGAVPYDGTWALGLGTK----VADVDLGSVLEVEQVREQVLQERAKKLSKSKRRDVRVGETRQFDYQR-GVENPLFARLSEDERKEVF--MLEKQAQEEGAIE-------IQMSLSHETRKSGRKYSTGSTTSLESMEEFQLADAALATPDFGCVSIEQLEEFAKIRDSRDGACGCSCGDLVKKVAKMNVKKLRAFLQERNIPLPGT-GKTELMAAAKKVAREQ---------KNCQSADSDCECARNGVPCHSDVCEGCAG------------DCYNPFQRYEYKSTKVKQYR 318
[Close]
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Match: A0A8K1CKM9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKM9_PYTOL)

HSP 1 Score: 112 bits (281), Expect = 3.080e-22
Identity = 101/315 (32.06%), Postives = 141/315 (44.76%), Query Frame = 1 
Query: 2185 KKEVAFGHVNLLEFTRDVGGCG-VPSDGTWGLALGLPFRETVV-DVDGYEASKAEILEERSRDLAKKQR-HLSTGETRQFDYRPVGEKNPLFARLGEKERRHVAKKLLEYACFHKADLE--EADRXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLSEFDAYSHKVSHAEFVDKSQEASVELTALRDSRRANQGCSCSCV--RADKLNTTKLRGELSKRGLKASGSKAKKELVKMLQEAMRQEEEQNGGKALKAC-RSDECQCVRDGVECHADLCNCCKGPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHRAPFV 3105
            KK+V +G V   EFTR  GG G VP DGTW L LG P  +  +  V   E  +   LE R+++L+K +R H+ +GETRQFDY+  G +NPLF RL E+ER+ V         F +++L+  E                                L + +   H     +F   S E   E   +RDSR    GCSC  +  +  K+N  KL   L+ R +      +K EL+ + +    QE         K C  S +C+C R+GVECHA +C  C G            +C NPH  Y Y    V  +R   +
Sbjct:  188 KKQVMWGEVYAREFTRFPGGGGAVPYDGTWALGLGSPTADVQLGSVLEVEELRLLELEARAKELSKSKRSHVRSGETRQFDYKS-GARNPLFGRLSERERKKV---------FTESELKHPEEHHHPLTPSPHASPVLKGKSQRKRSTSSELSALDDMEVVVH-----DFACVSIEQLDEFAKIRDSREEACGCSCGDLIKKVSKMNVKKLHAFLADRDITVKVH-SKPELLALAKGIALQE---------KNCSNSKDCECARNGVECHASVCVGCAG------------DCWNPHKSYMYKKKEVEQYRKQLI 465
[Close]
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Match: A0A5D6XN62_9STRA (MYND-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN62_9STRA)

HSP 1 Score: 109 bits (272), Expect = 5.300e-21
Identity = 100/316 (31.65%), Postives = 150/316 (47.47%), Query Frame = 1 
Query: 2182 VKKEVAFGHVNLLEFTRDVGGCG-VPSDGTWGLALGLPFRE----TVVDVDGYEASKAEILEERSRDLAKKQR-HLSTGETRQFDYRPVGEKNPLFARLGEKERRHVAKKLLEYACFHKAD-LEEADRXXXXXXXXXXXXXXXXXXXXXXXXXXX--KGLSEFDAYSHKVSHAEFVDKSQEASVELTALRDSRRANQGCSCSCV--RADKLNTTKLRGELSKRGLKASGSKAKKELVKMLQEAMRQEEEQNGGKALKACRSDE-CQCVRDGVECHADLCNCCKGPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHR 3093
            V+K + +G V+  EFTR  GG G VP DGTW L LG    +    +V+DV   E  +A+ L+ R ++L K +R H   GETRQFDY   G +NPLFARL E+ER+ +      +   H  D ++E+ R                             + LS+  +    +   +F   S E   E   +RDSR A  GC+C  +  +  K++  +L   L++RG+  +G  +K EL+   +E            A K C + E C+C R+GVECH+++C+ C G             C NP   Y Y+ + V  +R
Sbjct:  196 VRKHIMWGDVSAREFTRFPGGGGAVPYDGTWALGLGTAVADVQLGSVLDV---EQLRAQELQSRIQELPKSKRGHAREGETRQFDY-CRGVENPLFARLSERERKQL------FTEPHGDDVIDESQRPLHVKRKSSLSSTTLSPKQSPRLHPRKLSRSLSDAGSEGDALEAPDFACVSVEQLDEFAKIRDSRDAACGCACGDLVKKVAKMHVKRLHAFLAERGVATAGL-SKPELLARAKEV---------AAAEKNCANAESCECARNGVECHSNVCDGCAGA------------CWNPFKAYVYNKAEVGEYR 479
[Close]
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Match: M4B7I7_HYAAE (MYND-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B7I7_HYAAE)

HSP 1 Score: 107 bits (268), Expect = 1.200e-20
Identity = 103/317 (32.49%), Postives = 143/317 (45.11%), Query Frame = 1 
Query: 2185 KKEVAFGHVNLLEFTRDVGGCG-VPSDGTWGLALGLPFRETVV-DVDGYEASKAEILEERSRDLAK-KQRHLSTGETRQFDYRPVGEKNPLFARLGEKERRHVAKKLLEYACFHKADLEEADRXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLSEFDAYSHKVSH-------AEFVDKSQEASVELTALRDSRRANQGCSCSCV--RADKLNTTKLRGELSKRGLKASGSKAKKELVKMLQEAMRQEEEQNGGKALKACRS--DECQCVRDGVECHADLCNCCKGPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHR 3093
            KK V +G V+  EF R  GG G VP DGTW L LG    +  +  V   E  + + L++R   L++ K+R +  GETRQFDYR  G +NPLFARL E+ER+ V   + E     + DLE  +                               S  DA+    S         +F   S E   E T +RDSR    GCSC  +  +  K+N  KLR  L +R +K      K EL+   ++  R++         K C+S   +C+C R+GV CH+D+C  C G            +C NP   Y Y S  V+ +R
Sbjct:  156 KKHVIWGDVSAREFARFPGGGGAVPYDGTWALGLGHQLSDVALGSVLERERRREQTLQDRVELLSRAKRRDVREGETRQFDYRR-GVENPLFARLSEEERKRVFALVKEE---DEKDLELMEMGPISSSETRLASPLHWTKPSRRKNSTASTAS-LDAFEEGTSGDDAAWQTPDFGCVSIEQLDEFTRIRDSRDGACGCSCGDLVKKVAKMNVKKLRAFLQERQVKQLPGMGKTELMAAAKKLAREQ---------KNCQSTDSDCECARNGVPCHSDVCEGCAG------------DCCNPFQRYVYKSVEVQQYR 446
[Close]
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Match: D0NDW6_PHYIT (MYND-type domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0NDW6_PHYIT)

HSP 1 Score: 106 bits (264), Expect = 3.130e-20
Identity = 96/310 (30.97%), Postives = 138/310 (44.52%), Query Frame = 1 
Query: 2185 KKEVAFGHVNLLEFTRDVGGCG-VPSDGTWGLALGLPFRETVV-DVDGYEASKAEILEERSRDLAK-KQRHLSTGETRQFDYRPVGEKNPLFARLGEKERRHVAKKLLEYACFHKADLEEADRXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLSEFDAYSHKVSHAEFVDKSQEASVELTALRDSRRANQGCSCSCV--RADKLNTTKLRGELSKRGLKASGSKAKKELVKMLQEAMRQEEEQNGGKALKACRS--DECQCVRDGVECHADLCNCCKGPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHR 3093
            KK + +G V   EF R  GG G VP DGTW L LG    +  +  V   E  + + L+ER++ L+K K+R +  GETRQFDYR  G  NPLF+RL E ER+ V         F      + D                            +   E    +  ++  +F   S E   E   +RDSR    GCSC  +  +  K+N  KLR  L +  +  +G+  K EL+   ++  R++         K C S   +C+C R+GV CH+D+C  C G            +C NP   Y Y S+ V+ +R
Sbjct:  149 KKHIMWGGVQAREFARFPGGGGAVPYDGTWALGLGNKLADIELGSVLEVEQLREQELQERAKKLSKSKRRDVRVGETRQFDYRR-GVDNPLFSRLSEDERKQV---------FTLEKQSQEDGAIETQMSSSPELRKSWRKYSTGSASSIEPAEELQVANAALTTPDFGCVSIEQLDEFAKIRDSRDGACGCSCGDLVKKVAKMNVKKLRAFLQEHSVPLAGT-GKTELMAAAKKVAREK---------KNCASVGSDCECARNGVPCHSDVCEGCAG------------DCHNPFQRYEYKSTEVKQYR 426
[Close]
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Match: G4Z724_PHYSP (MYND-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z724_PHYSP)

HSP 1 Score: 106 bits (264), Expect = 3.870e-20
Identity = 101/314 (32.17%), Postives = 141/314 (44.90%), Query Frame = 1 
Query: 2185 KKEVAFGHVNLLEFTR-DVGGCGVPSDGTWGLALGLPFRETVV-DVDGYEASKAEILEERSRDLAK-KQRHLSTGETRQFDYRPVGEKNPLFARLGEKERRHVAKKLLEYACFHKADLEEADRXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLSEFDAYSHKVSHA----EFVDKSQEASVELTALRDSRRANQGCSCSCV--RADKLNTTKLRGELSKRGLKASGSKAKKELVKMLQEAMRQEEEQNGGKALKACRS--DECQCVRDGVECHADLCNCCKGPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHR 3093
            KK + +G V+  EF R   GG  VP DGTW L LG    +  +  V   E  K + L+ R++ L+K K+R +  GETRQFDYR  G  NPLF+RL E ER+ V      +    +A  E+A                                S  +A       A    +F   S E   E   +RDSR    GCSC  +  +  K+N  KLR  L +R +   G+  K EL+   ++  R++         K C+S   +C+CVR+GV CH+D+C  C G            +C NP   Y Y SS V+ +R
Sbjct:  171 KKHIMWGDVSAREFARFPGGGSAVPYDGTWALGLGKKVADVQLGSVLEVEQLKEQELQARAKKLSKAKRRDVRVGETRQFDYRR-GVDNPLFSRLSEDERKQV------FTLEKQAQEEDA--------IEIQMSTSPEVKKSWRKYSTGSPASSIEAAEEMADAALTTPDFGCVSIEQLDEFAKIRDSRDGACGCSCGDLVKKVAKMNVKKLRAFLQERNVPLPGT-GKTELMAAAKKVAREQ---------KNCQSADSDCECVRNGVPCHSDVCEGCAG------------DCYNPFQRYEYKSSEVKQYR 447
[Close]
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Match: A0A225WU06_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WU06_9STRA)

HSP 1 Score: 102 bits (255), Expect = 2.480e-19
Identity = 98/313 (31.31%), Postives = 142/313 (45.37%), Query Frame = 1 
Query: 2185 KKEVAFGHVNLLEFTR-DVGGCGVPSDGTWGLALGLPFRE----TVVDVDGYEASKAEILEERSRDLAK-KQRHLSTGETRQFDYRPVGEKNPLFARLGEKERRHVAKKLLEYACFHKADLEEADRXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLSEFDAYSHKVSHAEFVDKSQEASVELTALRDSRRANQGCSCSCV--RADKLNTTKLRGELSKRGLKASGSKAKKELVKMLQEAMRQEEEQNGGKALKACRSDE--CQCVRDGVECHADLCNCCKGPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHR 3093
            KK + +G V   EF R   GG  VP DGTW L LG    +    +V++V   E  + + L+ R++ L+K K+R +  GETRQFDYR  G  NPLFARL E ER+ V      +    +A  E A                             + +   DA    ++  +F   S E   E   +RDSR    GCSC  +  +  K+N  KLR  L +  +   G+  K EL+ + ++  R++         K C S +  C+C R+GV CH+D+C  C G            +C NP   Y Y S+ V+ +R
Sbjct:  101 KKHIMWGDVQAREFARFPGGGSAVPYDGTWALGLGNKLADIDLGSVLEV---EEQREQELQLRAKKLSKSKRRDVRVGETRQFDYRR-GVDNPLFARLSEDERKQV------FTLEKQAQEEGAIEIQMSSSPELRKAWRKYSTGSTCSIETAEEVQVADA---ALTTPDFGCVSIEQLDEFAKIRDSRDGTCGCSCGDLVKKVAKMNVKKLRAFLQEHNVPLPGT-GKTELMTVAKKVAREQ---------KNCASADSNCECARNGVPCHSDVCEGCAG------------DCHNPFQRYEYKSTEVKQYR 378
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KEG0_9PHAE8.530e-15558.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJU8_ECTSI1.060e-15375.38SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CPQ0_9STRA8.950e-3835.89SAP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A3M6VHY3_9STRA2.150e-2432.48Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A8K1CKM9_PYTOL3.080e-2232.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XN62_9STRA5.300e-2131.65MYND-type domain-containing protein n=1 Tax=Pythiu... [more]
M4B7I7_HYAAE1.200e-2032.49MYND-type domain-containing protein n=1 Tax=Hyalop... [more]
D0NDW6_PHYIT3.130e-2030.97MYND-type domain-containing protein n=13 Tax=Phyto... [more]
G4Z724_PHYSP3.870e-2032.17MYND-type domain-containing protein n=5 Tax=Phytop... [more]
A0A225WU06_9STRA2.480e-1931.31Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig98contigC-linearis_contig98:445470..454039 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score481.5
Seed ortholog evalue7.8e-133
Seed eggNOG ortholog2880.D8LJU8
Hectar predicted targeting categoryother localisation
EggNOG OGs29KFU@1,2RTQS@2759
Ec32 ortholog descriptionSAP domain
Ec32 orthologEc-23_000210.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size3707
Cds size2439
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930842.5614102-UTR-C-linearis_contig98:445469..4459931622930842.5614102-UTR-C-linearis_contig98:445469..445993Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 445470..445993 -
1690881277.875853-UTR-C-linearis_contig98:445469..4459931690881277.875853-UTR-C-linearis_contig98:445469..445993Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 445470..445993 -
1622930842.7223277-UTR-C-linearis_contig98:453286..4537991622930842.7223277-UTR-C-linearis_contig98:453286..453799Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 453287..453799 -
1690881277.966971-UTR-C-linearis_contig98:453286..4537991690881277.966971-UTR-C-linearis_contig98:453286..453799Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 453287..453799 -
1622930842.7395422-UTR-C-linearis_contig98:453808..4540391622930842.7395422-UTR-C-linearis_contig98:453808..454039Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 453809..454039 -
1690881277.9761727-UTR-C-linearis_contig98:453808..4540391690881277.9761727-UTR-C-linearis_contig98:453808..454039Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 453809..454039 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930842.581019-CDS-C-linearis_contig98:445993..4461521622930842.581019-CDS-C-linearis_contig98:445993..446152Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 445994..446152 -
1690881277.8864298-CDS-C-linearis_contig98:445993..4461521690881277.8864298-CDS-C-linearis_contig98:445993..446152Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 445994..446152 -
1622930842.5976176-CDS-C-linearis_contig98:446414..4464821622930842.5976176-CDS-C-linearis_contig98:446414..446482Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 446415..446482 -
1690881277.8955474-CDS-C-linearis_contig98:446414..4464821690881277.8955474-CDS-C-linearis_contig98:446414..446482Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 446415..446482 -
1622930842.6184494-CDS-C-linearis_contig98:446763..4469031622930842.6184494-CDS-C-linearis_contig98:446763..446903Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 446764..446903 -
1690881277.90717-CDS-C-linearis_contig98:446763..4469031690881277.90717-CDS-C-linearis_contig98:446763..446903Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 446764..446903 -
1622930842.634804-CDS-C-linearis_contig98:447573..4477281622930842.634804-CDS-C-linearis_contig98:447573..447728Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 447574..447728 -
1690881277.9207058-CDS-C-linearis_contig98:447573..4477281690881277.9207058-CDS-C-linearis_contig98:447573..447728Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 447574..447728 -
1622930842.6523325-CDS-C-linearis_contig98:447921..4480961622930842.6523325-CDS-C-linearis_contig98:447921..448096Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 447922..448096 -
1690881277.9292212-CDS-C-linearis_contig98:447921..4480961690881277.9292212-CDS-C-linearis_contig98:447921..448096Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 447922..448096 -
1622930842.671792-CDS-C-linearis_contig98:448532..4486751622930842.671792-CDS-C-linearis_contig98:448532..448675Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 448533..448675 -
1690881277.9376886-CDS-C-linearis_contig98:448532..4486751690881277.9376886-CDS-C-linearis_contig98:448532..448675Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 448533..448675 -
1622930842.6884274-CDS-C-linearis_contig98:449446..4509051622930842.6884274-CDS-C-linearis_contig98:449446..450905Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 449447..450905 -
1690881277.9470472-CDS-C-linearis_contig98:449446..4509051690881277.9470472-CDS-C-linearis_contig98:449446..450905Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 449447..450905 -
1622930842.7074795-CDS-C-linearis_contig98:453146..4532861622930842.7074795-CDS-C-linearis_contig98:453146..453286Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 453147..453286 -
1690881277.9573529-CDS-C-linearis_contig98:453146..4532861690881277.9573529-CDS-C-linearis_contig98:453146..453286Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 453147..453286 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig98.17130.1prot_C-linearis_contig98.17130.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig98 445994..453286 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig98.17130.1

>prot_C-linearis_contig98.17130.1 ID=prot_C-linearis_contig98.17130.1|Name=mRNA_C-linearis_contig98.17130.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=813bp
MPAKGGGKQHGPRKSSAGAATLVRSDQDSGMALVKSKDGRTKWLTVSTDP
SSSSGITWDERVRTWASMLGVCAAPPSPCHHHHGSRQGTPLPTPPPNGSS
WGGDDESAMKPQHQQQQRRENWPSDGTTISSGAAATSAAAAAAPVAATKP
SEDKNKIAAAAGDQRCTAPTAEVDAAAAAASTARRKPSSSGKRVGVGSFA
RGFLLGLGGGGGGGGGGGSAGKKSPTVKAKKLAEKAKKAQEEAAAAAAAA
LEREDVPAVEGAGDQDVTIGELPPSPAPAGADGGGLIGRSRWVKGAPPSP
SPSDGSDSSGRNHGGTSSKEGKREGGGGLSAGDRGGVPSCATTAATLDNA
ADCAGEAAVPTATVSPDDMDWLETGPGGSSNSSTGNGTKSATAGGGCSKK
KKKNKTKSKGGGGGKPAKKLSSCSNSSSTSGTNMLTQSMSQSSSEQGGHG
REETPPAAATTSKSKRAKLKQQQKQKQQKVKKEVAFGHVNLLEFTRDVGG
CGVPSDGTWGLALGLPFRETVVDVDGYEASKAEILEERSRDLAKKQRHLS
TGETRQFDYRPVGEKNPLFARLGEKERRHVAKKLLEYACFHKADLEEADR
DKDKDGTDDGSGHRNSHSDGDGHGGGGKGLSEFDAYSHKVSHAEFVDKSQ
EASVELTALRDSRRANQGCSCSCVRADKLNTTKLRGELSKRGLKASGSKA
KKELVKMLQEAMRQEEEQNGGKALKACRSDECQCVRDGVECHADLCNCCK
GPSIGEKDAHHGGNCGNPHSVYAYSSSVVRSHRAPFVTSKVVPGREKGHG
RSDYICSGSEGH*
back to top

mRNA from alignment at C-linearis_contig98:445470..454039-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig98.17130.1 ID=mRNA_C-linearis_contig98.17130.1|Name=mRNA_C-linearis_contig98.17130.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8570bp|location=Sequence derived from alignment at C-linearis_contig98:445470..454039- (Chordaria linearis ClinC8C monoicous)
CGATCGATCACAGAGCAGCGGGCGCGAAGAGGACGCCTACCCGCGTTTCA
AAGAGAGAGGTGGGCATGAAGTTGCCTTTTGTAGGGAAAGTGCAAGAAGG
CACCCTGACAGATCTTGCCTTAGTCTTCCCTCTCTCCTGCTCGCGCTCCC
GCTTAGCGCGAAGCCAGTACATAATGCCTTTGCCCGACCGTATCTAGATG
CGGGGGGGCAAGATTTTTCGGTTACCCTGGTGCTGGTTAGGCTTGGGTGC
CCGTTCTGCGCGCCCAATGCTTGGCATTTTTTTTCTCCCTCAACAACTCT
CTATTCTAGACTCTAGTAAATCACTGCCGCATGATTTGATACCTACCTGG
CAGGTACCTCGCAGCCTCGACCCAGGTATCTAATTGTCGGTATGTAAGAG
CTAACTGGTAAATAAGTTTGAGCAGTTAGCCAGCGCCAATGTTCCTCGGA
GAGCGTGCAGCCAAAATCGCTCGTGAGGTGGGAGCCCTGTCATTTGTTTT
TCCAACCGCGGGCTCCAAGACAGCTGGTTGCAACGGTGAACAGAGTGTTC
ATCCGCCCGTTCTGCGTTCTTCCCCCTCAACACGACGATGGCGTCTTATT
TCTTATTTCGTCTGTTCCTGATCTCTTTGTGCGCCCCCCCGCCCCGCCCA
CCTACTTGGCTTTTAACTATGACGCTTGTCACGTTTGTGACACCCGCTAC
CGGCAGTAATCTTTGCTGGGCAACGAGGACAAGACGCACACGGGCCGTGA
TCAATGCCTGCCAAAGGCGGGGGGAAACAGCATGGTCCTCGCAAGAGTAG
TGCTGGTGCTGCAACCCTAGTTAGGAGCGACCAGGACAGCGGAATGGCTC
TCGTTAAGAGCAAGGATGGACGCACCAAGTGGCTCACCGTCAGGTACATA
TGTATATGCAGGCCCATCCTGGTTTTGGCCAACTGGTGTATATTTTAGGT
ATAGTTTTGCGTCTACAGGTACAAGTATCATACATACAACGTTCCATACA
TGGAAAAAGGAAGTTGTTTGTCGATGCCTCGGTGATGGAGACAGCCGGGG
TCTTACAGTATGGGGAAAGCGTAGTATAGTCCCAGAGTGTTATAGCTGCC
TGTCTTTTGGTGCGCTTGAGGGCAATGTGGGCTTGCTCGGACGTTTTATT
ATCGTTATGCGATTCACCACACAACATGCCTGTGACTGCAATTTTTACCT
CCAGCAGCAGGAGCGGTATCTGTGGCTCATGAGCATTTGGGGGCCCATGG
GCCGCTCATGAGCCTGTCCGAACTGTCCGTGGACACTCTGTCCGTGAGCG
TCCCATGAGCACCCATCGACCGCTCATGGTCACTGCCATGAGCAGCGCCA
TGAGCAGCCATATCATGGATATGCCCGTAGGCACTCTGTTCATGAGCTGC
TCATGATGCTCTTCCGATACGTATTGTATACCAACAAGATGGGCCGAGCT
GGACACATACAAAATGGCCGTGGGCGCGATTTCCTACGCGGATTTTACGA
GTTAGAACCTGATTTTTTTACACGTGTTTGGTATGGTGAAAAGGAATACA
TTCAAAACTGGTCAAGTTTGATTTTTTTTTCTGCGGGTGATTTTGTCCCC
AAACAAATGTTGCTGTACAACTTGGTACAACAGCATTTTTCTGCGGGTGA
TGGTCCCCAAACAAATGTTGCTGTACAACTTGGTACAACAGCGGTATCTG
CTAATATTGGGCTATCTCACTAAAAAAAACAAAATATCAAAATTACAAAT
CAAAATGACCAGTTTTGGGTCTCTCTCGTAAAGAGCGATCCAAATCACGC
CTCAAAATTTCGGGTTAAATTCGTAGAAAGTAAAAACCGCGTGGGAAATG
AAGAATCCCGGTTTGGACCCGGGACCTAGGTGCAGGGGAACAAGTGTATA
CGAAGTAGGAAAATAGGGGGACTCACAGGCCGGAATTCATATCGAGCGCG
AAAGCGGTTTTTCTGGCACGAGGCGCACTGACACTAGCTGCAACATAGCG
GGGGTGTAGTACATTTACATGGCCATGCATGATGAAGTGGTGGCACAAAA
GAAGGTCGCTTCAAAGGGTCAAAAGGGTCAGGAACGCTAACAACAACGAA
GCTCCACAAACGTCATCAAAACCAGTTGTGAAGAGTTGAGCGCTGCGCGG
CGCTGCGTCGTCCACGCCGCGCCACGCAGCTTCTCTGGACATTTATCACG
CGCGGATGGGCCTCCTTCCACTATTTAGCCTGTGGCGGCGGGGTTGGGGC
TTGGCCTGTTGGCGCTCTATTTTCTCTTTCTTGTGTCTCAGATGCTCGAG
CGTGTGTGTGTGGTCGATTTTTTTGTCGCTGCAAAAAAAGAGCCGGTCTC
ATTTTTTTTTTTTTGCCAATTCTGTAGCCTATATCAAAAGGCGGAGGGGA
GGGTCTACTTCGTTTGACGGAACGGGCACAACAAGCCCATCAGAACCAGT
CGTGCGTGTCCGCTGTGATTGGCTGATTAGCAGGATGTGCGCAACTCTCC
TCAATTCTGTTTTTTTGAAAAGTTAAAGTTACTACTTGCCGAACAAAAGT
GAGCTTCTACTGCTGTAGCTCGGCCCAGCTTGTACTACAGCACAAGTAGA
AATACGATGTTTTTTTGTAATGGAGGGTGTTGGGTGTTGGATAATAGAGG
GGTTGTTCGTCGCCGCGTCCGTCTTTGCCCTATTGTCGTACCCGCAGCCT
GGCGAACGGCCGTCGTCTCGTCTGCTGCGAACACGGAATGGCGTTGAGAG
GAAAGGGAAAGGAGGCCCGCCCGCCCCCGTAGCACACTTCTTTGCTCCTT
CTATAAGGTCTATGGCACATAAATATCATGTGCGTGTGCCATTTTCGACG
CACTTGAGCTTGACCGCACAAACCCTCGAGTGTCGAGGCAGAGTTCGCAG
AACCTGTGTACCCCGTGCAGCAGTATCCCGCCCCACGCCCTCACCATCTT
GCCCGCGTTGGCCCTGCTCGATACCCAACAATCGCAAACACCCCACCCGA
AACCCTTGTTGAACCCCTTACCTTACCTTGCCTTATCTTACCTACTTTAC
CTTCCGCACGCGGCGCAGGCCCTTCTCTTGTTGACCCTTTACCTGCGCTT
CCTTCCCTTACCTTCCCTTCCCTTCTGCGTGCAGCACCGACCCTTCCTCC
TCCTCGGGCATCACCTGGGACGAGCGTGTTCGGACGTGGGCGAGCATGCT
CGGGGTGTGCGCGGCGCCGCCGTCCCCTTGCCACCACCACCACGGCAGCA
GGCAAGGGACGCCGCTGCCCACGCCGCCGCCGAACGGGAGCTCTTGGGGC
GGCGACGACGAGTCGGCCATGAAGCCGCAACATCAGCAGCAACAGCGCCG
AGAAAACTGGCCCTCCGACGGCACCACCATCAGCAGCGGTGCCGCCGCCA
CTTCCGCCGCTGCTGCCGCCGCTCCGGTGGCCGCTACCAAGCCCTCGGAA
GACAAGAATAAGATCGCGGCCGCCGCGGGAGATCAACGGTGCACTGCGCC
CACGGCTGAAGTTGACGCCGCGGCTGCTGCCGCTAGCACGGCGCGTCGAA
AACCTAGCAGCTCCGGGAAACGCGTCGGGGTGGGCAGCTTCGCGCGCGGT
TTCCTGCTGGGCCTGGGGGGCGGAGGAGGCGGCGGCGGTGGCGGCGGGAG
TGCCGGCAAGAAGAGCCCGACCGTTAAGGCCAAGAAGCTCGCCGAAAAGG
CAAAAAAGGCACAAGAGGAGGCGGCAGCAGCGGCGGCGGCGGCGCTTGAG
CGGGAGGATGTGCCCGCCGTTGAGGGTGCCGGCGATCAAGACGTGACGAT
CGGCGAGCTCCCACCTTCGCCGGCGCCGGCTGGAGCTGACGGCGGCGGCT
TGATCGGGCGTAGCAGGTGGGTCAAGGGCGCTCCGCCCAGCCCTAGCCCC
AGCGATGGCAGCGACAGCAGTGGGCGCAATCACGGAGGCACCAGCAGCAA
GGAGGGGAAGCGTGAGGGTGGGGGTGGGCTCTCCGCCGGTGACCGCGGCG
GTGTCCCAAGCTGTGCTACTACTGCTGCTACTCTAGACAACGCCGCTGAT
TGCGCGGGCGAAGCTGCCGTTCCCACCGCCACGGTAAGCCCTGACGACAT
GGACTGGCTTGAAACCGGCCCCGGCGGTAGCAGCAATAGCAGCACCGGCA
ACGGGACAAAATCAGCGACAGCAGGAGGAGGCTGCTCGAAGAAAAAAAAG
AAGAACAAGACCAAGAGTAAGGGAGGCGGCGGGGGGAAGCCTGCGAAGAA
GCTGTCTTCCTGCTCCAACTCGTCGTCCACTTCGGGCACGAACATGCTGA
CGCAATCAATGTCACAGTCGTCATCAGAGCAAGGCGGCCACGGCCGGGAA
GAAACGCCACCAGCGGCGGCGACCACGTCTAAGTCCAAGCGCGCCAAGCT
CAAGCAGCAGCAGAAGCAGAAGCAGCAGAAGGTGAAGAAGGAAGTGGCGT
TCGGACACGTGAACCTTCTCGAGTTTACCAGGGACGTGGGAGGCTGCGGT
GTTCCCAGCGACGGGACCTGGGGACTGGCGCTCGGGCTCCCGTTCCGAGA
AACAGTGGTCGATGTGGACGGGTATGAGGCGTCCAAGGCTGAGGTGAGGG
GAGGAGAGGAGAGGAGTAAGACCCCGCGGGGATGAATGGGTCTATCAATC
CTATATATAATAAGTCCTCTCACAATTTGCATTTTCTCTGTAATTGCGCC
GTTGTCGCGTCTGTGAGAGCTCTATTTCCTCTTTTCCGAAACTCGACCAT
ACCCGCGGCAGTCCCGCTTCCGGTGTGTTCTGACAGCAGCAGCTCTGTCG
TATGCGTTGCACGTTGCCTTGAAATCGCTTCCAGTGAAGCGGGGGCGCGA
AGCCCCCAAAACCTTGTGCTTGAAGGATAAGGATAAGGATTTGTCTGTCT
TTGTTTTTTGCTTTTTAGGGGTTTGAATACTGCTGTTGCTGTGGTTCACG
CACCGACTGAGGGAAGGGACACGAGAGAGACACAGAGAGACACAGAGAGA
CACACAGAGAGAGAGAGAGATGAAGAGACAGATATGTAGATGACTTTCAG
ACAGATAAGTGCGGGAGCGACCACGACGTGGAGGATAGCGCAGCTAAGCT
AAACAGCAACGATCGGTCACCGCTTGACGTCGACGCTGAGTTTGGCTACA
GTAGCGCCTTGATGCGCAAAAACAAATGTATGGTACCTTCGCATGCTGGA
TGCTTTTTTTCAAACCACGCTCTCGCGCTTGGTGTTGGCTGGCGCCTTGA
TGCACAATTTTTTACAGGTTTTCGACCTCTCGCATGCATGGATACTTTTT
TATTGAAACCGCACCACACCACGCCCTCGCGCTTGTTTCGGCGAACTATT
AATATAACCAGCAGATCCTGGAGGAGCGAAGCAGGGACCTGGCCAAGAAG
CAACGGCACCTTTCCACCGGAGAAACCAGGCAGTTCGACTACCGCCCCGT
AGGCGAGAAGAACCCTCTCTTTGCCCGCCTCGGGGAGAAGGAGCGCAGGC
ACGTAGCGTGTCGTGTCGGGTCATGTCGAGGTTGCCACGTGGTGTCTTGT
TTTGTCTTGTTTTGTTTTTCGATGCGGGGCTTTTTTTCTGTCTGCATTTA
GTTGTTGCAGGTTTGTGTGCTCGACACTCAAAAGCAATTTGCTAGAAGAT
AGGAAAACTATGTTTTCAGGTTCTCCGATCATACAGTTTCTGCTTCTTGT
GTCCCTTGCTATTGTAGACTGACTGTGGTGTTCTCTGCATCGATCGGTCG
GTCGATTGACGGTGTTAGATGCTAAATGTTGAATGTTAAAAAACGTCGTG
TCCTTTCCTTGCTTCGTTGCTGGAATTATCATCGTGCAATATCACCTTGA
TACTCCCACGGAGGTGCTTGGTATCATGCGAAGTGCGAAACTGTTTTAAC
AGTACAGTTTGTTGCGGGTTTTTCTTGCCTCTTCTTTTTGCAGCAAAAAA
CTGCTGGAGTACGCGTGCTTCCACAAGGCCGACCTAGAGGAAGCAGACAG
AGATAAAGATAAAGACGGCACCGACGACGGCAGCGGCCATCGCAACAGCC
ATAGCGATGGCGACGGGCACGGAGGCGGAGGAAAAGGGTTAAGCGAGTTC
GATGCCTACTCTCACAAGGTATCTACTGGGCGTGCTCCTTTCCGCCTCTG
CGGGAATACATAGGGAATGAAAGGTCAACGCAAAGTCTATCTTGTATTCT
GTGTTCCATAACTCAGCGATTGTGGCCCCATGAGTGCATGGTCATGGAAG
AACACACGCTCAGCCCTCCCCCCGCTCCTCCTGCAACTCCTCCTCTGGTA
TCCTATTAAAGGTGTCTCACGCGGAGTTCGTGGACAAGTCTCAAGAAGCG
TCGGTCGAGCTGACCGCGCTGAGAGATAGCAGGAGGGCGAATCAGGGGTG
CAGCTGCAGCTGCGTGCGCGCCGATAAGCTCAACACTACCAAGCTCAGGG
GGGAGCTCAGCAAGAGGCGAGTCGATACAGCACAGAGCTCTATCGTATTG
CTGTTTACTGGTGCTTGCTGCTGTTTTGCCCTCGTATTCTAAATCGCTCC
TCTCTTCTGAAACTGGTACGGTATTTTTTTGCAGCTGGCGTTCATGGTCG
TCCTGCCTACGTCGTACCAAAACGCAATTGCATGATCGGACACGACACGT
TGGGCTTGTTTCCTGGTGATGGCCCAGGAGGAGCTCATTGCACCTCATCA
TCTGCATCCACACTACTCTGTATCCGTTTCCCACTCAGATCTTTTGACTA
TTATAGGAGGATATGGGTTGTGTGCGTCACAACAGGGATATCTGAATTGC
CGGCAAGCTTTGTGTTGGTTTTTTGGATTTTGCTCGCCGAGCAACCTAAA
TCAGCGTGGGAAGATGGGCTGAAGTATGCACTGAAGCATGGCTGGCTTCG
GCCATGTCCATGTAGGCACCGCACCGCGCCGCACCGCACCATCCCTGTTT
TGATGTTTTGACGTTTTGATGTTTTGGTGTCTATTCCGGTATATACTGTG
TATGAGCTCGCCACAAGCTCCTTACCCTAAACGAAACCCGCTGCCCTTCT
CATCTTAAGTTCGATGCGTACTGCTGTATCATACGCCGTGTGTCCCCGTG
TGTCTCGACCTTCTGATGTGTCCATTTGTTGTCCAGGGGCCTGAAGGCGT
CGGGATCGAAGGCGAAGAAGGAGCTGGTGAAGATGCTGCAAGAGGCGATG
CGCCAGGAGGAAGAGCAGAACGGCGGCAAGGCCTTGAAGGCCTGTCGCTC
CGACGAGTGCCAGTGCGTCCGAGACGGTAAGAAAAACAATTAGAAGAAGC
CGCTTACAATGTAAAAAGACACATCGAACGAGAACAAAACGTTAAGGTTG
ACAACAACAACAACAACAACAACAACAACAACAACAACCCCGTATTCGGA
TGTTTCGGGGAGTTCGCGAGGGTAATTTGTTTTTTTGTTTCATAAAGCTT
TTTCGTGTCAATGTTCTTCTTTTTTCGCAGGGCCACTTTGCCTCTTCTTT
TTTGAAGCGAAGGGCATCCCGTGCTGTTTTTGTTGCTTGTGTGTCGTTGT
TCGTCAGGTGTGGAATGTCACGCCGATCTGTGCAACTGCTGCAAAGGCCC
GAGCATAGGGGAGAAGGACGCACACGTGAGTAGGGGGGGGGCGATCCCTA
TTCGCCTTTCTGTTTGCGTTGATGACATCAAGTCCGAGGCCACACATACA
TAACCCCAAGAACCTGCCACCCATGTTTATTCCCCTACACCATTGTCACC
TCGCGTTGGACGGTGTCGAGAACGACACACAACCCTAACCCCCGATGCAC
CGAACCCTAACACCAACACCAACCCGCCCTGTCCCTGTCCCTGTCCCTGC
TGTCCAACCCGTAACGCACATAAACGGAACGCAACAGCACGGAGGAAATT
GCGGAAACCCTCATAGCGTGTATGCCTACAGCAGCAGCGTCGTCCGCTCT
CATCGGGCCCCTTTCGTGACCTCCAAGGTGGTGCCGGGGAGGGAGAAGGG
CCACGGCCGAAGCGATTATATCTGCTCTGGCTCTGAGGGCCATTGAATTA
ACGAGCGTCTCGAGGTGTCTCCCATCACTCCGATCATCAGTGACATCATG
TGGCGTGGTCTGACGTGACCAAGCCATTTCGCTGATCGGTCGTCGGTCGC
ACTTCTTTTTTATTTTTGGTGCTCAATTAGGCATGTAGGGGGTGGGTGGC
AGGCACGATGTCAATACGACGAAATCTAATGTTTTGGAACCACTCTAGGT
ATCGTCCCATTCTAGGCATCGCTCGGCGAGTATGAGCGACAAAGAGACAA
GAGAAAAGAGACGGCAAGGAGCGAGGCAGGGTAGGAACTGAGGTGCTCAA
TCTCAGTCTCGCCTCAGTCTCGCCTCAGTTTGACAGCGGCAGGGCATGGT
TGGGGACTTGAATCGTCTTCAAATTCCAACAAGGGCAGAGGGGAGGAGTT
GTTTTTATTGTGATGTTTGGCCGGGTTTGTCCACACCACAAGTACAAAAG
ACAAGACAAGAGACGAAAATAAAAACAGGTGTAGATGAAGGACGGGAGTA
ACTGGACGTGGGAGATTGGG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig98:445470..454039-

>mRNA_C-linearis_contig98.17130.1 ID=mRNA_C-linearis_contig98.17130.1|Name=mRNA_C-linearis_contig98.17130.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4878bp|location=Sequence derived from alignment at C-linearis_contig98:445470..454039- (Chordaria linearis ClinC8C monoicous)
ATGCCTGCCAAAGGCGGGGGGAAACAGCATGGTCCTCGCAAGAGTAGTGC
TGGTGCTGCAACCCTAGTTAGGAGCGACCAGGACAGCGGAATGGCTCTCG
TTAAGAGCAAGGATGGACGCACCAAGTGGCTCACCGTCAGATGCCTGCCA
AAGGCGGGGGGAAACAGCATGGTCCTCGCAAGAGTAGTGCTGGTGCTGCA
ACCCTAGTTAGGAGCGACCAGGACAGCGGAATGGCTCTCGTTAAGAGCAA
GGATGGACGCACCAAGTGGCTCACCGTCAGCACCGACCCTTCCTCCTCCT
CGGGCATCACCTGGGACGAGCGTGTTCGGACGTGGGCGAGCATGCTCGGG
GTGTGCGCGGCGCCGCCGTCCCCTTGCCACCACCACCACGGCAGCAGGCA
AGGGACGCCGCTGCCCACGCCGCCGCCGAACGGGAGCTCTTGGGGCGGCG
ACGACGAGTCGGCCATGAAGCCGCAACATCAGCAGCAACAGCGCCGAGAA
AACTGGCCCTCCGACGGCACCACCATCAGCAGCGGTGCCGCCGCCACTTC
CGCCGCTGCTGCCGCCGCTCCGGTGGCCGCTACCAAGCCCTCGGAAGACA
AGAATAAGATCGCGGCCGCCGCGGGAGATCAACGGTGCACTGCGCCCACG
GCTGAAGTTGACGCCGCGGCTGCTGCCGCTAGCACGGCGCGTCGAAAACC
TAGCAGCTCCGGGAAACGCGTCGGGGTGGGCAGCTTCGCGCGCGGTTTCC
TGCTGGGCCTGGGGGGCGGAGGAGGCGGCGGCGGTGGCGGCGGGAGTGCC
GGCAAGAAGAGCCCGACCGTTAAGGCCAAGAAGCTCGCCGAAAAGGCAAA
AAAGGCACAAGAGGAGGCGGCAGCAGCGGCGGCGGCGGCGCTTGAGCGGG
AGGATGTGCCCGCCGTTGAGGGTGCCGGCGATCAAGACGTGACGATCGGC
GAGCTCCCACCTTCGCCGGCGCCGGCTGGAGCTGACGGCGGCGGCTTGAT
CGGGCGTAGCAGGTGGGTCAAGGGCGCTCCGCCCAGCCCTAGCCCCAGCG
ATGGCAGCGACAGCAGTGGGCGCAATCACGGAGGCACCAGCAGCAAGGAG
GGGAAGCGTGAGGGTGGGGGTGGGCTCTCCGCCGGTGACCGCGGCGGTGT
CCCAAGCTGTGCTACTACTGCTGCTACTCTAGACAACGCCGCTGATTGCG
CGGGCGAAGCTGCCGTTCCCACCGCCACGGTAAGCCCTGACGACATGGAC
TGGCTTGAAACCGGCCCCGGCGGTAGCAGCAATAGCAGCACCGGCAACGG
GACAAAATCAGCGACAGCAGGAGGAGGCTGCTCGAAGAAAAAAAAGAAGA
ACAAGACCAAGAGTAAGGGAGGCGGCGGGGGGAAGCCTGCGAAGAAGCTG
TCTTCCTGCTCCAACTCGTCGTCCACTTCGGGCACGAACATGCTGACGCA
ATCAATGTCACAGTCGTCATCAGAGCAAGGCGGCCACGGCCGGGAAGAAA
CGCCACCAGCGGCGGCGACCACGTCTAAGTCCAAGCGCGCCAAGCTCAAG
CAGCAGCAGAAGCAGAAGCAGCAGAAGGTGAAGAAGGAAGTGGCGTTCGG
ACACGTGAACCTTCTCGAGTTTACCAGGGACGTGGGAGGCTGCGGTGTTC
CCAGCGACGGGACCTGGGGACTGGCGCTCGGGCTCCCGTTCCGAGAAACA
GTGGTCGATGTGGACGGGTATGAGGCGTCCAAGGCTGAGCACCGACCCTT
CCTCCTCCTCGGGCATCACCTGGGACGAGCGTGTTCGGACGTGGGCGAGC
ATGCTCGGGGTGTGCGCGGCGCCGCCGTCCCCTTGCCACCACCACCACGG
CAGCAGGCAAGGGACGCCGCTGCCCACGCCGCCGCCGAACGGGAGCTCTT
GGGGCGGCGACGACGAGTCGGCCATGAAGCCGCAACATCAGCAGCAACAG
CGCCGAGAAAACTGGCCCTCCGACGGCACCACCATCAGCAGCGGTGCCGC
CGCCACTTCCGCCGCTGCTGCCGCCGCTCCGGTGGCCGCTACCAAGCCCT
CGGAAGACAAGAATAAGATCGCGGCCGCCGCGGGAGATCAACGGTGCACT
GCGCCCACGGCTGAAGTTGACGCCGCGGCTGCTGCCGCTAGCACGGCGCG
TCGAAAACCTAGCAGCTCCGGGAAACGCGTCGGGGTGGGCAGCTTCGCGC
GCGGTTTCCTGCTGGGCCTGGGGGGCGGAGGAGGCGGCGGCGGTGGCGGC
GGGAGTGCCGGCAAGAAGAGCCCGACCGTTAAGGCCAAGAAGCTCGCCGA
AAAGGCAAAAAAGGCACAAGAGGAGGCGGCAGCAGCGGCGGCGGCGGCGC
TTGAGCGGGAGGATGTGCCCGCCGTTGAGGGTGCCGGCGATCAAGACGTG
ACGATCGGCGAGCTCCCACCTTCGCCGGCGCCGGCTGGAGCTGACGGCGG
CGGCTTGATCGGGCGTAGCAGGTGGGTCAAGGGCGCTCCGCCCAGCCCTA
GCCCCAGCGATGGCAGCGACAGCAGTGGGCGCAATCACGGAGGCACCAGC
AGCAAGGAGGGGAAGCGTGAGGGTGGGGGTGGGCTCTCCGCCGGTGACCG
CGGCGGTGTCCCAAGCTGTGCTACTACTGCTGCTACTCTAGACAACGCCG
CTGATTGCGCGGGCGAAGCTGCCGTTCCCACCGCCACGGTAAGCCCTGAC
GACATGGACTGGCTTGAAACCGGCCCCGGCGGTAGCAGCAATAGCAGCAC
CGGCAACGGGACAAAATCAGCGACAGCAGGAGGAGGCTGCTCGAAGAAAA
AAAAGAAGAACAAGACCAAGAGTAAGGGAGGCGGCGGGGGGAAGCCTGCG
AAGAAGCTGTCTTCCTGCTCCAACTCGTCGTCCACTTCGGGCACGAACAT
GCTGACGCAATCAATGTCACAGTCGTCATCAGAGCAAGGCGGCCACGGCC
GGGAAGAAACGCCACCAGCGGCGGCGACCACGTCTAAGTCCAAGCGCGCC
AAGCTCAAGCAGCAGCAGAAGCAGAAGCAGCAGAAGGTGAAGAAGGAAGT
GGCGTTCGGACACGTGAACCTTCTCGAGTTTACCAGGGACGTGGGAGGCT
GCGGTGTTCCCAGCGACGGGACCTGGGGACTGGCGCTCGGGCTCCCGTTC
CGAGAAACAGTGGTCGATGTGGACGGGTATGAGGCGTCCAAGGCTGAGAT
CCTGGAGGAGCGAAGCAGGGACCTGGCCAAGAAGCAACGGCACCTTTCCA
CCGGAGAAACCAGGCAGTTCGACTACCGCCCCGTAGGCGAGAAGAACCCT
CTCTTTGCCCGCCTCGGGGAGAAGGAGCGCAGGCACGTAGCATCCTGGAG
GAGCGAAGCAGGGACCTGGCCAAGAAGCAACGGCACCTTTCCACCGGAGA
AACCAGGCAGTTCGACTACCGCCCCGTAGGCGAGAAGAACCCTCTCTTTG
CCCGCCTCGGGGAGAAGGAGCGCAGGCACGTAGCCAAAAAACTGCTGGAG
TACGCGTGCTTCCACAAGGCCGACCTAGAGGAAGCAGACAGAGATAAAGA
TAAAGACGGCACCGACGACGGCAGCGGCCATCGCAACAGCCATAGCGATG
GCGACGGGCACGGAGGCGGAGGAAAAGGGTTAAGCGAGTTCGATGCCTAC
TCTCACAAGCAAAAAACTGCTGGAGTACGCGTGCTTCCACAAGGCCGACC
TAGAGGAAGCAGACAGAGATAAAGATAAAGACGGCACCGACGACGGCAGC
GGCCATCGCAACAGCCATAGCGATGGCGACGGGCACGGAGGCGGAGGAAA
AGGGTTAAGCGAGTTCGATGCCTACTCTCACAAGGTGTCTCACGCGGAGT
TCGTGGACAAGTCTCAAGAAGCGTCGGTCGAGCTGACCGCGCTGAGAGAT
AGCAGGAGGGCGAATCAGGGGTGCAGCTGCAGCTGCGTGCGCGCCGATAA
GCTCAACACTACCAAGCTCAGGGGGGAGCTCAGCAAGAGGTGTCTCACGC
GGAGTTCGTGGACAAGTCTCAAGAAGCGTCGGTCGAGCTGACCGCGCTGA
GAGATAGCAGGAGGGCGAATCAGGGGTGCAGCTGCAGCTGCGTGCGCGCC
GATAAGCTCAACACTACCAAGCTCAGGGGGGAGCTCAGCAAGAGGGGCCT
GAAGGCGTCGGGATCGAAGGCGAAGAAGGAGCTGGTGAAGATGCTGCAAG
AGGCGATGCGCCAGGAGGAAGAGCAGAACGGCGGCAAGGCCTTGAAGGCC
TGTCGCTCCGACGAGTGCCAGTGCGTCCGAGACGGGGCCTGAAGGCGTCG
GGATCGAAGGCGAAGAAGGAGCTGGTGAAGATGCTGCAAGAGGCGATGCG
CCAGGAGGAAGAGCAGAACGGCGGCAAGGCCTTGAAGGCCTGTCGCTCCG
ACGAGTGCCAGTGCGTCCGAGACGGTGTGGAATGTCACGCCGATCTGTGC
AACTGCTGCAAAGGCCCGAGCATAGGGGAGAAGGACGCACACGTGTGGAA
TGTCACGCCGATCTGTGCAACTGCTGCAAAGGCCCGAGCATAGGGGAGAA
GGACGCACACCACGGAGGAAATTGCGGAAACCCTCATAGCGTGTATGCCT
ACAGCAGCAGCGTCGTCCGCTCTCATCGGGCCCCTTTCGTGACCTCCAAG
GTGGTGCCGGGGAGGGAGAAGGGCCACGGCCGAAGCGATTATATCTGCTC
TGGCTCTGAGGGCCATTGACACGGAGGAAATTGCGGAAACCCTCATAGCG
TGTATGCCTACAGCAGCAGCGTCGTCCGCTCTCATCGGGCCCCTTTCGTG
ACCTCCAAGGTGGTGCCGGGGAGGGAGAAGGGCCACGGCCGAAGCGATTA
TATCTGCTCTGGCTCTGAGGGCCATTGA
back to top