prot_C-linearis_contig97.17094.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig97.17094.1
Unique Nameprot_C-linearis_contig97.17094.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length388
Homology
BLAST of mRNA_C-linearis_contig97.17094.1 vs. uniprot
Match: D7G2Q5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q5_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 8.550e-74
Identity = 196/399 (49.12%), Postives = 222/399 (55.64%), Query Frame = 0
Query:    6 GEFEIFDEATSKKIQDEHEKDMSDAAKAIGARRMGLITG-DSEKSTATP---------SAAGTGLMSKLASATSLFSRKKTPAPAPAAAHXXXXXXXXXXXXXXXXXXXX-------NSAQPSKSPLPPPPSRVAGEGKPEAGAPTSTNDKEGDWRPPQEPTTVQEAVTAXXXXXXXXXXXXXXXXXXXXXXXXXAAAPAAQTPAGTEIAEQTATGPSKSEDKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVLPELKVVTFEVREPSLGAAVVGHVAILEGSCYVWAGTEGSSAQGSLAAAVGTRFDGGVPTATPLLAGEGAGEAGAAGGVSLSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVVVLLKAND 387
            G+ +IFD ATSKKI +EH++DM DAAKAIG R M LI G + + +TAT          S  G  L+ KLA ATSLFSRKK PAP PAA                              +AQPS +     P  VA  G PE  APT T         P+EP    +              XXXXXXXXXXXXXX    PA +  A  + + + A   S+                                                     EAVLPELKVV+F+VREP+LGA+VVGHV +L GSCYVWA TEGS AQGSLAAAVGTRFDGG+PTATPLLAGEGAGEAG  GGV +SMAQRLC+RTGRVVFVSCDLSEDSQILVAAVEAKVV LLKA D
Sbjct:    2 GDIDIFDAATSKKIHEEHQRDMEDAAKAIGPRGMALIRGLEKQTTTATTRITQSLTAGSLHGGRLLRKLAPATSLFSRKKPPAPTPAAEPLAGSEPAAQAPTAPTLEQLLLAEIHMATNAQPSSAATLELPPAVAESGSPETAAPTETT--------PEEPPAADDVGDVGRKPPPVPASXXXXXXXXXXXXXXGEPEPARRLKAEGKGSVEPARSASRE---------------------------------PAEPAPSPPAAAPTKDAGSEAVLPELKVVSFDVREPTLGASVVGHVVVLAGSCYVWAATEGSVAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGG-GGVGVSMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEAKVVALLKAED 358          
BLAST of mRNA_C-linearis_contig97.17094.1 vs. uniprot
Match: A0A6H5K9L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L5_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 9.910e-74
Identity = 187/405 (46.17%), Postives = 215/405 (53.09%), Query Frame = 0
Query:    2 DFDDGEFEIFDEATSKKIQDEHEKDMSDAAKAIGARRMGLITG-DSEKSTATP---------SAAGTGLMSKLASATSLFSRKKTPAPAPAA---------AHXXXXXXXXXXXXXXXXXXXXNSAQPSKSPLPPPPSRVAGEGKPEAGAPTSTNDKEGDWRPPQEPTTVQEAVTAXXXXXXXXXXXXXXXXXXXXXXXXXAAAPAAQTPAGTEIAEQTATGPSKSEDKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVLPELKVVTFEVREPSLGAAVVGHVAILEGSCYVWAGTEGSSAQGSLAAAVGTRFDGGVPTATPLLAGEGAGEAGAAGGVSLSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVVVLLKAND 387
            D D G+ +IFD ATSKKI +EH++DM DAAKAIG R M LI G + +  TAT          S  G  L+ KL  ATS FSRKKTPAP PAA         A                     N+   S + L PPP+ VA  G PE  APT T        P +EP+   +                                PA++T A  E  E      ++ +  VE                                               EAVLPELK+V+F+VREP+LGA+VVGHV +L GSCYVWA TEGS AQGSLAAAVGTRFDGG+PTATPLLAGEGAGEAG  GGV +SMAQRLC+RTGRVVFVSCDLSEDSQILVAAVEAKVV LLKA D
Sbjct:   12 DTDVGDIDIFDAATSKKIHEEHQRDMEDAAKAIGPRGMALIRGLERQTMTATTRITQSLTAGSLHGGRLLRKLTPATSFFSRKKTPAPTPAAEPVAGPKPAAAPAPTAPTLEQLLLAELHMATNAQSSSNATLEPPPT-VAESGSPETAAPTET--------PSEEPSAADDVDVGRKPPPV----------------------PASETAAAGEP-EPARRLDAEGKGSVETARFTSRESAEPAPSPPAAAPTEDAGS--------------------EAVLPELKIVSFDVREPTLGASVVGHVVVLAGSCYVWATTEGSVAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGE-GGVGVSMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEAKVVALLKAED 363          
BLAST of mRNA_C-linearis_contig97.17094.1 vs. uniprot
Match: A0A485KKL7_9STRA (Aste57867_8572 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKL7_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.400e-9
Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 0
Query:  289 ILEGSCYVWAGTEGSSAQ-GSLAAAVGTRFDGGVPTATPLLAGEGAGEAGAAGGVSLSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVVVLLK 384
            +L  +C+VW G +GS A+ GS++ AV TR+D  +P A+ L+ G G         V   MAQRL  RTG+ VFVSC+L ED   L A VE ++V  L+
Sbjct:   41 LLPNACFVWIGLDGSPARMGSMSTAVKTRYDP-LPLASSLIGGSG-------DEVEQQMAQRLVLRTGKQVFVSCNLPEDDMELCAFVERQIVARLR 129          
BLAST of mRNA_C-linearis_contig97.17094.1 vs. uniprot
Match: W4FSB2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FSB2_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.600e-5
Identity = 39/97 (40.21%), Postives = 54/97 (55.67%), Query Frame = 0
Query:  289 ILEGSCYVWAGTEGSSA-QGSLAAAVGTRFDGGVPTATPLLAGEGAGEAGAAGGVSLSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVVVLLK 384
            +L  +C+VW G + +    GS++ AV TR+D  +P A+ LL G        A      MAQRL  RTG+ VFVSC+L ED   L A VE  ++  L+
Sbjct:   41 LLAHACFVWVGLDETPVCMGSMSTAVKTRYDP-LPLASSLLGG-------GADDTEQQMAQRLVLRTGKQVFVSCNLPEDDMELGAYVERAILQRLR 129          
BLAST of mRNA_C-linearis_contig97.17094.1 vs. uniprot
Match: A0A6G0WHC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHC5_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 7.580e-5
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 0
Query:  289 ILEGSCYVWAGTEGSSAQ-GSLAAAVGTRFDGGVPTATPLLAGEGAGEAGAAGGVSLSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVV 380
            +L  +C+VW G + ++   GS++ AV T++D  +P A+ L+ G    E          MAQRL  RTGR VFVSC+L +D   L A +E  ++
Sbjct:   36 LLANACFVWIGLDSTAVSLGSMSTAVKTKYDP-LPLASSLIGGGNEMEQ--------QMAQRLVLRTGRQVFVSCNLPDDDMELGAFIERAII 119          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G2Q5_ECTSI8.550e-7449.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9L5_9PHAE9.910e-7446.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485KKL7_9STRA2.400e-944.33Aste57867_8572 protein n=1 Tax=Aphanomyces stellat... [more]
W4FSB2_9STRA2.600e-540.21Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6G0WHC5_9STRA7.580e-537.63Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032157Proteasome assembly chaperone 4PFAMPF16093PAC4coord: 285..364
e-value: 1.4E-16
score: 60.4
IPR032157Proteasome assembly chaperone 4PANTHERPTHR33559FAMILY NOT NAMEDcoord: 282..385
NoneNo IPR availablePANTHERPTHR33559:SF1PROTEASOME ASSEMBLY CHAPERONE 4coord: 282..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig97contigC-linearis_contig97:354245..356204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig97.17094.1mRNA_C-linearis_contig97.17094.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig97 353750..356287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig97.17094.1 ID=prot_C-linearis_contig97.17094.1|Name=mRNA_C-linearis_contig97.17094.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=388bp
MDFDDGEFEIFDEATSKKIQDEHEKDMSDAAKAIGARRMGLITGDSEKST
ATPSAAGTGLMSKLASATSLFSRKKTPAPAPAAAHAAAAPAPPAPVAPVA
PAAASNSAQPSKSPLPPPPSRVAGEGKPEAGAPTSTNDKEGDWRPPQEPT
TVQEAVTAVTPPEAPDAKKEKGSPALPALPVPPAAAPAAQTPAGTEIAEQ
TATGPSKSEDKVEVEGDSTGSTSTSAAPTESEPAKAASSTPTASPDTAAA
AEPAPAAAQAEAVLPELKVVTFEVREPSLGAAVVGHVAILEGSCYVWAGT
EGSSAQGSLAAAVGTRFDGGVPTATPLLAGEGAGEAGAAGGVSLSMAQRL
CRRTGRVVFVSCDLSEDSQILVAAVEAKVVVLLKAND*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032157PAC4