mRNA_C-linearis_contig97.17089.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig97.17089.1
Unique Name	mRNA_C-linearis_contig97.17089.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Match: D7FU12_ECTSI (GST N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU12_ECTSI)

HSP 1 Score: 531 bits (1367), Expect = 2.570e-185
Identity = 262/325 (80.62%), Postives = 286/325 (88.00%), Query Frame = 3

Query:   45 MYSGVALVAATVLCGLQGSLGFLPVPSVAPAVSRQRYFTEVSMAVKVNDQLPADAKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDEGEYAVVRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNILDLDVMFYPCPQGGPTFRPKAKGMGANAFPYMVDPNSKTSMGESDDIINYLYETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALELWGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYLVDPNTGAKGYESSEINDYLDLTYAL 1019
            M+S V+ +A  +L G   +  FL   S A AVS QR   ++SMA    DQLPADAKRYYVRPDR LDV+TSAPQLL RLGSGALVDGY  K+SREEEGDEGEYAVVRALGFKVTERGNTWD+QQPRKPIEIYEFEGCPFCRKVREA+NI+D+DV+FYPCPQGGPTFRPKAK MG  AFPYMVDPN+KTSM ESD+I+ YL+ETYGEGAKVPFQLSLG  TTL+AGLGMLPR LKG +YTPAKMPKK LELWGYE+SPFTKVVREKL ELEIPHKF+SSARGSPKRQ+LYEMAGAGQTPYL+DPNTGAKGYESSEINDYLD TYAL
Sbjct:    1 MHSAVSAIATMLLVGRTAA--FLTSSSAAIAVS-QRSTNKLSMAATKPDQLPADAKRYYVRPDRFLDVLTSAPQLLFRLGSGALVDGYTVKVSREEEGDEGEYAVVRALGFKVTERGNTWDRQQPRKPIEIYEFEGCPFCRKVREAINIVDIDVVFYPCPQGGPTFRPKAKEMGTTAFPYMVDPNTKTSMPESDEIVKYLFETYGEGAKVPFQLSLGFGTTLSAGLGMLPRGLKGSKYTPAKMPKKPLELWGYEASPFTKVVREKLSELEIPHKFVSSARGSPKRQKLYEMAGAGQTPYLIDPNTGAKGYESSEINDYLDKTYAL 322

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BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Match: A0A6A5MS47_LUPAL (Putative thioredoxin-like protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A6A5MS47_LUPAL)

HSP 1 Score: 310 bits (793), Expect = 2.320e-98
Identity = 157/273 (57.51%), Postives = 189/273 (69.23%), Query Frame = 3

Query:  204 DAKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDEGEYAVVRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNILDLDVMFYPCPQGGPTFRPKAKGMGANA-FPYMVDPNSKTSMGESDDIINYLYETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALELWGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYLVDPNTGAKGYESSEINDYLDLTYAL 1019
            + KR+ VRPD   +V+ +A  L+ R  +G  V GY F    ++E   G+YA++   G+K+ E        +P KPIEIYEFE CPFCRKVRE V ILD+DV+FYPCP+ GP FRPK   +G    FPYMVDPN+ TSM ESDDII YL   YG+G  VPF LSLG +TTLTAG GML R+ KG +YTPAK+P K L+LW YE SPF K+VRE L ELE+PH  IS ARGSPKRQ LY+  G  Q PYL DPNTG   +ES+EI +YL  TYAL
Sbjct:   61 EPKRFEVRPDMRGEVLGAALPLIFRFATGVFVSGYSFSFVPKDEIPPGQYAMLEVNGYKLKETSKANLSPRPEKPIEIYEFESCPFCRKVREIVAILDIDVLFYPCPRNGPNFRPKVVEIGGKQQFPYMVDPNTDTSMYESDDIIRYLVGQYGDG-NVPFTLSLGFLTTLTAGFGMLARSGKGSKYTPAKLPPKPLKLWAYEGSPFCKLVREVLVELELPHVQISCARGSPKRQILYDKTGHFQAPYLEDPNTGIGMFESAEIIEYLKTTYAL 332

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BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Match: UPI001FB14667 (uncharacterized protein LOC124912054 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB14667)

HSP 1 Score: 309 bits (791), Expect = 5.100e-98
Identity = 157/275 (57.09%), Postives = 192/275 (69.82%), Query Frame = 3

Query:  198 PADAKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDEGEYAVVRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNILDLDVMFYPCPQGGPTFRPKAKGMGANA-FPYMVDPNSKTSMGESDDIINYLYETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALELWGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYLVDPNTGAKGYESSEINDYLDLTYAL 1019
            P   KR+ VRPD+ILD++ ++  LL RLG+GALV GY      + E    +YA+  A GFKV E      +  P KPIEIYEFEGCPFC+KVRE V +LDLDV++YPCPQ GP FRPKA  MG    FPYM+DPN+  +M ESDDII YL + YG+G  VP  LSLG++TTLT G  ++PR  +G  YTP+++P K +E+W YE SPF KVVRE L ELE+PH   S ARGSPKRQ L+E  G  Q PYL DPNTG K +ES+EI +YL  TYAL
Sbjct:   66 PPKPKRFAVRPDKILDIMGASLALLFRLGTGALVSGYSVSFVPKNEIPSDKYALEFA-GFKVKETSKLGPR--PEKPIEIYEFEGCPFCKKVREIVAVLDLDVLYYPCPQNGPNFRPKAIQMGGKKQFPYMLDPNTGVAMYESDDIIKYLVQKYGDG-NVPIMLSLGLLTTLTEGFALIPRMGRGSSYTPSRIPPKPIEIWAYEPSPFCKVVREVLVELELPHLLYSCARGSPKRQVLFEKVGHFQAPYLEDPNTGVKMFESAEIVEYLKATYAL 336

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BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Match: A0A2J6KUV4_LACSA (GST N-terminal domain-containing protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KUV4_LACSA)

HSP 1 Score: 307 bits (787), Expect = 2.310e-97
Identity = 156/275 (56.73%), Postives = 191/275 (69.45%), Query Frame = 3

Query:  198 PADAKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDEGEYAVVRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNILDLDVMFYPCPQGGPTFRPKAKGMGANA-FPYMVDPNSKTSMGESDDIINYLYETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALELWGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYLVDPNTGAKGYESSEINDYLDLTYAL 1019
            P + KR+ VRPD++ DV+T++  LL R G+G  V GY      + E   G+Y +    G+ V E      +  P KPIEIYEFEGCPFCRKVRE V +LDLDV+FYPCP+ GPTFRPK   MG    FPYMVDPN+  +M ESDDII YL + YG+G+ VP  LSLG++TTLTAG  M+ R  KG  YT AKMP + LE+W YE+SPF+K+VRE L ELE+PH   S ARGSPKRQ+L+E  G  Q PYL DPNTG K +ES+EI +YL  TYAL
Sbjct:   70 PPEPKRFAVRPDKVADVITASLNLLFRFGTGVFVSGYSVSFVPKNEFPSGQYGLE-VSGYIVKESSKLGPR--PEKPIEIYEFEGCPFCRKVREIVAVLDLDVLFYPCPRNGPTFRPKVGQMGGKQMFPYMVDPNTGVAMYESDDIIKYLVQKYGDGS-VPLSLSLGLLTTLTAGFAMIGRMGKGSIYTKAKMPAQPLEVWAYEASPFSKLVREVLVELELPHILHSCARGSPKRQELFERVGHFQAPYLEDPNTGVKMFESAEIVEYLRATYAL 340

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BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Match: A0A2K2A5Q3_POPTR (Uncharacterized protein n=9 Tax=Saliceae TaxID=238069 RepID=A0A2K2A5Q3_POPTR)

HSP 1 Score: 305 bits (781), Expect = 1.240e-96
Identity = 153/274 (55.84%), Postives = 193/274 (70.44%), Query Frame = 3

Query:  198 PADAKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDEGEYAVVRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNILDLDVMFYPCPQGGPTFRPKAKGMGANA-FPYMVDPNSKTSMGESDDIINYLYETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALELWGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYLVDPNTGAKGYESSEINDYLDLTYA 1016
            P + KR+ VRPD+  D++ ++  L+ RLG+G  V+GY      ++     +Y++  A G+KV E      +  P KPIEIYEFEGCPFCRKVRE V +LDLDV+FYPCP+ GP FRPK   MG    FPYMVDPN+ T+M ESDDII YL + YG+G+ +PF LSLG++TTLT G  M+ R  KG  YTP+K+P K LELW YE SPF K+VRE L ELE+PH F S ARGSPKRQ L+E AG  Q PY+ DPNTG + +ES+EI +YL +TYA
Sbjct:   57 PPEPKRFAVRPDKTWDIIGASLALIFRLGTGVFVNGYSVSFVSKDAIPPDQYSLEVA-GYKVKETSKLGPR--PEKPIEIYEFEGCPFCRKVREIVAVLDLDVLFYPCPKNGPNFRPKVAQMGGKQQFPYMVDPNTGTAMYESDDIIKYLVQKYGDGS-IPFTLSLGLLTTLTEGFAMIGRMGKGSSYTPSKLPPKPLELWAYEGSPFCKIVREVLVELELPHIFRSCARGSPKRQILFEKAGHFQAPYIEDPNTGVQMFESAEIVEYLKVTYA 326

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BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Match: A0A804IFI6_MUSAM ((wild Malaysian banana) hypothetical protein n=3 Tax=Musa TaxID=4640 RepID=A0A804IFI6_MUSAM)

HSP 1 Score: 305 bits (780), Expect = 1.870e-96
Identity = 154/276 (55.80%), Postives = 191/276 (69.20%), Query Frame = 3

Query:  198 PADAKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDEGEYAV-VRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNILDLDVMFYPCPQGGPTFRPKAKGMGANA-FPYMVDPNSKTSMGESDDIINYLYETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALELWGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYLVDPNTGAKGYESSEINDYLDLTYAL 1019
            P + KR+ VRPD+ LD++ ++  L  RLG+G  V GY   +  E++   GEYA+ +  L FK T   N   + +P KPIEIYEFEGCPFCRKVRE V+ILDLD+++YPCP+  P FRPK   MG    FPYMVDPN+  +M ESDDII YL + YG+G   P  LSLG++TTLT G  M+ R  KG  Y+P+K P   LE+W YE SPF K+VRE L ELE+PH F S+ARGSPKRQ+LY+  G  Q PYL DPNTG K +ES+EI DYL  TYAL
Sbjct:   58 PPEPKRFSVRPDKFLDILGASLALPCRLGTGVFVLGYSVSLVSEDKIPPGEYALKIAGLTFKET--SNLGAQARPEKPIEIYEFEGCPFCRKVREIVSILDLDILYYPCPRNSPNFRPKVLQMGGKQQFPYMVDPNTGVAMYESDDIIKYLVQKYGDGTT-PLMLSLGLLTTLTEGFAMIGRMGKGSSYSPSKTPPMPLEIWAYEGSPFCKIVREVLVELELPHIFRSTARGSPKRQELYKRVGRFQVPYLEDPNTGVKMFESAEIIDYLRTTYAL 330

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BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Match: UPI0012637800 (uncharacterized protein LOC116125376 n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI0012637800)

HSP 1 Score: 305 bits (780), Expect = 2.060e-96
Identity = 158/274 (57.66%), Postives = 190/274 (69.34%), Query Frame = 3

Query:  198 PADAKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDEGEYAVVRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNILDLDVMFYPCPQGGPTFRPKAKGMGANA-FPYMVDPNSKTSMGESDDIINYLYETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALELWGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYLVDPNTGAKGYESSEINDYLDLTYA 1016
            P + KR+ VRPD++LD+V ++  LL RL +GA V GY      ++E   G+YA+  A GFK+ E      +  P KPIEIYEFE CPFCRKVRE V +LDLDV++YPCP+ GP FRPK   MG    FPYMVDPN+  SM ESDDII YL   YG+G+ VPF LSLG++TTLT G  M+ R  KG  YTP+K+P K LE+W YE SPF KVVRE L ELE+PH   S ARGSPKRQ LYE A   Q PYL DPNTG + +ES+EI +YL  TYA
Sbjct:   63 PPEPKRFGVRPDKVLDIVGASLALLFRLATGAFVSGYSASFVSKDEIPPGQYALDIA-GFKLKETSKLGPR--PEKPIEIYEFESCPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVAQMGGKQLFPYMVDPNTGVSMYESDDIIKYLVGKYGDGS-VPFMLSLGLLTTLTEGFAMIGRMGKGSSYTPSKLPPKPLEIWAYEPSPFCKVVREVLVELELPHLLRSCARGSPKRQVLYEKAKHFQVPYLEDPNTGVQMFESAEIVEYLRATYA 332

[Close]

BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Match: A0A1Y1IQL2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQL2_KLENI)

HSP 1 Score: 304 bits (779), Expect = 5.060e-96
Identity = 154/272 (56.62%), Postives = 192/272 (70.59%), Query Frame = 3

Query:  207 AKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDEGEYAVVRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNILDLDVMFYPCPQGGPTFRPKAKGMGANA-FPYMVDPNSKTSMGESDDIINYLYETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALELWGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYLVDPNTGAKGYESSEINDYLDLTYAL 1019
            AKR+  R D++L +  ++  LL+RLGSGALV GY   + +++   +  Y++ R  G +  E+G       P KPIEIYEFEGCPFCRKVREAV  LDLDV+F+P PQ GPT+RPKA  +G    FPYM+DPN+  SM ESD+II+YL  TYG+G K+ FQL LG +T+LTAGL MLPR  KG  Y PAK P K LELW YE+SPF K+VRE L ELE+PH + S ARGS KRQ+L++  G  Q PYL DPNTGA  +ES +I DYL+  YAL
Sbjct:   80 AKRFTPRGDKVLALAAASVPLLMRLGSGALVAGYSTSLEKDDSDPQSTYSLFRVAGRRFVEKGAA--HTLPAKPIEIYEFEGCPFCRKVREAVTFLDLDVLFFPTPQDGPTYRPKAIELGGKKQFPYMIDPNTGYSMYESDEIISYLSRTYGDG-KMAFQLKLGPLTSLTAGLAMLPRLGKGSSYRPAKKPAKPLELWAYEASPFCKIVREVLVELELPHVYHSCARGSAKRQELFDRTGIFQAPYLEDPNTGAAMFESGDIIDYLEKEYAL 348

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BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Match: A0A6I9QCY0_ELAGV (uncharacterized protein LOC105033756 isoform X1 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QCY0_ELAGV)

HSP 1 Score: 304 bits (778), Expect = 5.340e-96
Identity = 156/275 (56.73%), Postives = 190/275 (69.09%), Query Frame = 3

Query:  198 PADAKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDEGEYAVVRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNILDLDVMFYPCPQGGPTFRPKAKGMGANA-FPYMVDPNSKTSMGESDDIINYLYETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALELWGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYLVDPNTGAKGYESSEINDYLDLTYAL 1019
            P   KR+ VRPD+ LD+++++  L  RLG+GA V GY      E++    EY V+   G K+ E      +  P KPIEIYEFE CPFCRKVRE V+ILDLDV+FYPCP+ GP FRPK   MG    FPY+VDPN+  +M ESDDII YL + YG+G   P  LSLG++TTLTAG  M+ R  +G  YTP+K+P   LELW YE+SPF K+VRE L ELE+PH   S+ARGSPKRQ+LYE AG  Q PYL DPNTG K +ES+EI DYL  TYAL
Sbjct:   71 PPQPKRFSVRPDKFLDILSASLALPFRLGTGAFVLGYSASFVSEDKISSNEY-VMSIAGLKLKEASKLGPR--PEKPIEIYEFESCPFCRKVREIVSILDLDVLFYPCPRNGPNFRPKVLQMGGKQQFPYLVDPNTGVAMYESDDIIKYLVKKYGDGTT-PLMLSLGLLTTLTAGFAMIGRMGRGSMYTPSKLPPVPLELWAYEASPFCKIVREVLVELELPHLLHSTARGSPKRQKLYEEAGHFQVPYLDDPNTGVKMFESAEIIDYLRATYAL 341

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BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Match: A0A5N6PGQ0_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PGQ0_9ASTR)

HSP 1 Score: 303 bits (777), Expect = 6.630e-96
Identity = 157/275 (57.09%), Postives = 191/275 (69.45%), Query Frame = 3

Query:  198 PADAKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDEGEYAVVRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNILDLDVMFYPCPQGGPTFRPKAKGMGANA-FPYMVDPNSKTSMGESDDIINYLYETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALELWGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYLVDPNTGAKGYESSEINDYLDLTYAL 1019
            P + K +  RPD+I+D++T++  LL RLG+G  V+GY      + E   G+YA+  A GF   E      +  P KPIE+YEFEGCPFCRKVRE V +LDLDV++YPCP+ GPTFR K   MG    FPYMVDPN+  SM ESDDII YL + YG+G  VP  LSLG++TTLTAG  M+ R  KG  YT AKMP + LE+W YE+SPF+K+VRE L ELE+PH   S ARGSPKRQ+LYE  G  Q PYL DPNTG K +ES+EI DYL  TYAL
Sbjct:   67 PPEPKLFTPRPDKIVDLITASLNLLFRLGTGVFVNGYSVSFVSKNEIPPGQYALGVA-GFVAKESSKLGPR--PVKPIELYEFEGCPFCRKVREIVAVLDLDVLYYPCPRNGPTFRRKVLQMGGKQMFPYMVDPNTGVSMYESDDIIKYLVQKYGDG-NVPLSLSLGLLTTLTAGFAMIGRMGKGSMYTKAKMPPQPLEVWAYEASPFSKLVREVLVELELPHILHSCARGSPKRQELYEKIGHFQVPYLEDPNTGVKMFESAEIVDYLRATYAL 337

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot

BLAST of mRNA_C-linearis_contig97.17089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FU12_ECTSI	2.570e-185	80.62	GST N-terminal domain-containing protein n=2 Tax=E...	[more]
A0A6A5MS47_LUPAL	2.320e-98	57.51	Putative thioredoxin-like protein n=2 Tax=Lupinus ...	[more]
UPI001FB14667	5.100e-98	57.09	uncharacterized protein LOC124912054 n=1 Tax=Impat...	[more]
A0A2J6KUV4_LACSA	2.310e-97	56.73	GST N-terminal domain-containing protein n=2 Tax=L...	[more]
A0A2K2A5Q3_POPTR	1.240e-96	55.84	Uncharacterized protein n=9 Tax=Saliceae TaxID=238...	[more]
A0A804IFI6_MUSAM	1.870e-96	55.80	(wild Malaysian banana) hypothetical protein n=3 T...	[more]
UPI0012637800	2.060e-96	57.66	uncharacterized protein LOC116125376 n=2 Tax=Anaca...	[more]
A0A1Y1IQL2_KLENI	5.060e-96	56.62	Uncharacterized protein n=1 Tax=Klebsormidium nite...	[more]
A0A6I9QCY0_ELAGV	5.340e-96	56.73	uncharacterized protein LOC105033756 isoform X1 n=...	[more]
A0A5N6PGQ0_9ASTR	6.630e-96	57.09	Uncharacterized protein n=1 Tax=Mikania micrantha ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig97	contig	C-linearis_contig97:315924..322157 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	532.3
Seed ortholog evalue	1.6e-148
Seed eggNOG ortholog	2880.D7FU12
Hectar predicted targeting category	signal peptide
EggNOG free text desc.	Glutathione S-transferase, N-terminal domain
EggNOG OGs	28NCX@1,2QUYC@2759
Ec32 ortholog description	Thioredoxin-like fold
Ec32 ortholog	Ec-11_003550.1
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	8
Model size	1586
Cds size	978
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig97.17089.1	prot_C-linearis_contig97.17089.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig97 315968..321593 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930833.2813878-UTR-C-linearis_contig97:315923..315967	1622930833.2813878-UTR-C-linearis_contig97:315923..315967	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 315924..315967 +
1690881273.2475026-UTR-C-linearis_contig97:315923..315967	1690881273.2475026-UTR-C-linearis_contig97:315923..315967	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 315924..315967 +
1622930833.4347887-UTR-C-linearis_contig97:321593..322157	1622930833.4347887-UTR-C-linearis_contig97:321593..322157	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 321594..322157 +
1690881273.363204-UTR-C-linearis_contig97:321593..322157	1690881273.363204-UTR-C-linearis_contig97:321593..322157	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 321594..322157 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig97:315924..322157+
coding sequence from alignment at C-linearis_contig97:315924..322157+

protein sequence of mRNA_C-linearis_contig97.17089.1

>prot_C-linearis_contig97.17089.1 ID=prot_C-linearis_contig97.17089.1|Name=mRNA_C-linearis_contig97.17089.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=326bp
MYSGVALVAATVLCGLQGSLGFLPVPSVAPAVSRQRYFTEVSMAVKVNDQ
LPADAKRYYVRPDRILDVVTSAPQLLLRLGSGALVDGYRFKISREEEGDE
GEYAVVRALGFKVTERGNTWDKQQPRKPIEIYEFEGCPFCRKVREAVNIL
DLDVMFYPCPQGGPTFRPKAKGMGANAFPYMVDPNSKTSMGESDDIINYL
YETYGEGAKVPFQLSLGIVTTLTAGLGMLPRALKGGRYTPAKMPKKALEL
WGYESSPFTKVVREKLCELEIPHKFISSARGSPKRQQLYEMAGAGQTPYL
VDPNTGAKGYESSEINDYLDLTYAL*

mRNA from alignment at C-linearis_contig97:315924..322157+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig97.17089.1 ID=mRNA_C-linearis_contig97.17089.1|Name=mRNA_C-linearis_contig97.17089.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6234bp|location=Sequence derived from alignment at C-linearis_contig97:315924..322157+ (Chordaria linearis ClinC8C monoicous)
GCAGCATTTTTCGCGCAACGCTACACTGCCTCAGTCGTGCAATCATGTAC
TCCGGTGTGGCCTTAGTCGCTGCTACCGTCTTATGTGGTTTACAGGGGTC
TTTGGGCTTTCTCCCTGTGCCCTCTGTCGCCCCAGCGGTGTCACGTCAGC
GATATTTCACGGAGGTGAGCATGGCGGTCAAAGTCAATGACCAGCTTCCT
GCTGACGCAAAGCGCTACTATGTTCGCCCGGACAGGATCCTCGATGTTGT
GACTTCAGCGCCACAGCTTCTGCTCCGACTGGGGAGTGGCGCATTGGTGG
ATGGCTATCGATGTGAGTACGTACGTATCTCCCTGCATATCGGGCGCAAC
CACCAAGTCGGTAGCTGCTGTCATATTTATATATTTATGCATCTGGCAAT
CCTGTACCGGTACTGAATCTCTGTCTCTAGCCTAAAACCCCGACACAAAA
GCTCGTGTTGACCTCGGTGTCGAGCACTTCCCTGCTTGGAGCTCCAGTAC
GCACCGGTCGCCCCGGTGGCCTAGTGGTTTAACCTCGAACCCACTAGCTG
CAAAGTCTGGAGTTCAATTCCAAGCAAAGGTGATTATTTTGCGACTTTGC
AGGTGAAACCGATAATGTTGCTGAAAAAGCTCGTGAGTACCAAACTTCGA
CTTAGCCCGTTGACGAGGGAAAGGGATGGCTGCACCCTTCTCGCGATAAA
ATCCAAGGCAAGCACCGCAGGAGGAAGGTGGGGCAAAAAAGAAACAGAAA
AAGAAGAAAAAAGCCCCACCCAGTGTTAACCCCCTCCTGTGTGACCCCGG
TTGGTTCTAGTTGCACAGAAAAATACACTGAACAAGTGTAGTTCTCTAAA
TACACCGCAACGTGTAGTACACGTCTCGCCTTGATCGGAAAGGGACTGTC
GCCAAAATAAATGGGACGAAAACACACACACACACATTTGCAGACCGGGG
CGCTCACACGGTTGTTCTTTCAACCGCACCACACGCAGTCAAAATTTCGA
GGGAGGAGGAAGGAGACGAGGGGGAATACGCGGTTGTCAGGGCTCTGGGC
TTCAAGGTGAGGTGCTTATTTCGCACGAGTCGGACAAACCCATTATTTAG
ATCTACTCGTGGATGTGCACAGACATTTCGTGCCCCGGTGAGCCAAGATC
ACAACGTGCGCAACGTTGCTACTAGGTATGATCTTGATTTGGCTGATAAA
TGTATGCCTCGAGATGCGTAGGCTTGTCCTTTCTTTTCTCGCTTCTTGCC
GCCTTCGGGGGAGAGGGAAGAGACAAGGAGAAAGAGAGAGGGGCAGTTTA
TGGGCAAGGACACATGCGCGGCACACACCAGAGCGAATAAGAGAGGAGGC
TCCTCCAAAGATGTTGGTCCTGAAGAGGTGATGTTGGAAGCGGGGTTGTA
GCCGAAAGGCCAAAACAAACACATGGGAAACACAGAAGCAGAAGCAGAAG
AGACAGAGACAGAGAGAGAGAGAGTCAATTGAACGGCGAGACACAAAATC
GAACACTGCGGGAGGAAATCCGATGGGGGGTGAAGGGTGCAGCGGTGGTG
GAGCGTTTAACGGACAGAGGTAGCCGTCAGATAGAGGCAAAAGGCGAGAA
AAGTTCGGGCTTTACAAGTACCGCGTGTTCTTTGTTGGACGGTGGATCAC
GGGATGCAATTTCAGCGCGGCTACAGCGCGGCGCTCTTGATGATCAAATC
AGCGGTTCTAGCGGGAAAATGAGGTGTACCGTAGTTGGAGACCGCACCCC
TTTATTTTGTCTCCCGTTCAGCTACGACCGATCGAACTTCTAAATACCAC
GATGCATGCACCAGAGCGCCCCCGGTCGGTATGGCATGGCCACACCGTCA
GTAGTCGACGTCGTCTCAACCTTCATGAGGTTTTTGAAAGTGGAAAAGGG
GCAGAGACAACGATTTTTGTTTGTCCGTGTTCTCCGGTCGACACACCGAG
TGAAATCGTGAAATCTGACGCTCTGATTTTTGAAGTACTTCAACTTTGTT
TTGCAGCAGTCCTGCGGTGTGCACTTGGCCAATCATGAAATTCTTGAATT
GAGCACCCTACACGGCGCAAAACAAATTTCCACTCCAAGGATCCAAGGGC
GGGAACATCCATATGGTCATGTGTTTTTTTCTGTGGTGCTTGTGTCAAAC
CATGGGAACGCTCATCCTTACACCCGTTGCAGCAGAAAAAGGTGAAATGG
AGCAAGCTTGCAAAGCACTCCCACCCCTCTCTTCTTGGTACTCATTGGCC
TTAGCACTCTCTACGCGTGCCAGCCAACAGGCATTTGAGTCCTGCATGCC
TACCATTAACTGCATCCTGTGCTGCACGTACACGGCAGATGATTCGCTCC
CTCCTGGTTGAAAGTTCGCTTGTACTACGGGGTGTCTCGGCTATTTTACG
TTGCCGACGTCTGGTCTCCTTTGTGCGTCATGTTTGTACCCGCTTCTTTT
CAAAGGTGACGGAGAGGGGAAACACCTGGGACAAACAGCAGCCCCGAAAA
CCCATCGAGATCTACGAGTTCGAGGGCTGCCCGTTCTGCCGGAAAGTCAG
GGAGGCGGTCAACATCCTCGACCTTGACGTGATGTTTTACCCGTGCCCGC
AAGGTAAGCCCGGAACTAAGCGAGATATATTTTGTTCTTTTTCGAAAGCG
GCCTCGAGAGCTCAACATTCTCCGGGTTATCCCATCAAACGACGCGCGCT
CGAGCGAGGAAAAGATTAGCAAACCCTCCGACTCTGCGCGTGCTTACTTT
TGATCGTGCGTACACCGCTGCGAATCTGTGAATCTGTGCCGTGTACAACT
CGCCGTTCGGTCGAACAGGCGGGCCGACGTTCCGGCCGAAGGCGAAAGGC
ATGGGAGCCAACGCCTTTCCCTACATGGTGGACCCCAATTCCAAGACCTC
CATGGGAGAAAGCGACGACATCATCAACTACCTCTACGAAACCTACGGCG
AAGGAGCCAAGGTGAATCTGTGTTTTGGTTTTCGCCCGTGCCCTGGAATA
TTTTGTACGTTCATTTTTGCCAACCCATGATTTGTTTTGTAGAGACAAGC
AAAGGTTTGATGTTTGTATGACTGAGGGAGCGACAACAGCCTGGCAATTT
CCCGTCTGAAAATGGGCCCAAAAAAACACCCTCATGAAATATGCACAAAA
GTGTGGCCCGTCGCACTACTTGAAAATGGTATGTTTTATTTCCTTTTTTT
TTCACGCCGCACACCCTTGTTTGAGACTGAATCCGACCGCCTTGGGTGAT
TTCAGCCGCCAAAACTACTGACCAATCGAAAATAGACTCTCAGTCACACT
TGAGCATTGGTCGTGGTCGGATGATTGTGGCAAGGACAATTCAAGACAAA
CTTGCGCTGTCTACAGCTGCATAGCGCGATACACACATCCATAGATTACA
GCAGGTGCTCTGGAATGCAAGTTGGCACCTCGAAGTAAGCTACCACCACA
CCGTTGCTTGTCGTTTCATATCCAGTTCACGGCACGAGCACACAAGAGCG
TACGAACAAGCTACGCGTCCCAATACTCGAAGTTTCAAATCTCGAAATTT
CTAACAGTTTGGCAGGCTCGATGATCCGTGCACGGGTTTCATGTTTAACC
CATGTACACGGCACCAGTAGTGTCTCTGTCTTATGGGGTTTTCTAGGGTT
GGGGACTGGACCAGTATCTACTGCCAGGATTCCTGTACTGGCAGTATTCC
GTACTGCGTCAGAAGCTGCCAGTACAGCCAGTACATACCCACTCTACGTC
CTACATTATGCCTCCTAAACCACATGGATGGAGTCGTTTGCGCGTTTTCA
CCGGTGCTTCGTTGAATATTGTTGGCTAACCTTTCTTTGTGCTATTATAT
TACGTACTCTTTGCTTGCCTATTGTTCACTCTTTCCGACTAACGCCTTCT
ACACCCGCGTGGCATTCCTGATGCCCTACTTGTACTGTTTTCTGCATGCA
TTGAATAGGTGTAAGGCATTCTCTAGGTTCTAACTGTATTTGATATTTGA
TTTGAAGTTTTCATAGTATTTCACACCCGAGCAGGCATCATCGAAGTGGC
CCAAAATCACCCAAAAAATATCTTCTAGTGAAGCCAAATCGCGTAAAAAT
ACGCCTCCGGGCGGCCTCCCTCACCAGCCGGGGGGCGGTGGTCGCGGCAC
AGCAGCCAGTTTCCTGGTACTGGCGCAAAGCGCCAGTCCCCAACCCTAGG
GTTTTCAGTACCCTAGTTTATTTTTTTGGCGCAATTTTTGCGTGTTGTGT
TTGATATGTCCTTCCATTCTCTGCCTATATCAAAACCCTCCACACCCAGG
TTCCGTTCCAGCTGTCGCTTGGAATTGTCACGACCCTCACGGCTGGTCTT
GGAATGCTGCCGCGAGCTCTGAAGGGAGGAAGATACACTCCGGTGCGTAA
CTTACGCGAAATCGACCCACTATGTTGATGAAAATGTGTTCGGGGGTATA
TTTGTGCAGCTTTACTGATGTGTGGAGGCATATTTCGCTGGCGGAGGTAG
ACAGCGGTAGTTTTCTGGATTTTGCCTCGCTTTCTCTCCGTGCGCTCAGG
AGCTGGTTGGACCAACGCGGTGTGCGTTTTGTCTTCGAACCTGTGTACAT
AGCCCCATGATGTTCCAAGCGCGTTTTGTTTTGCCTAGCCTGTCGTAAGC
GTCCAGAAAATACTACTTGAGCTTCCAAGAGTATTTTTGACAACATTCAG
CACTTGGCCATCAGGAGTATGGCCTTCTCGTGCCCCTTCAGCGCACAGTT
CTGATCCTACGAGGTTCGTTTGCTTCCCTCCCCGTGCGGCGCAGGCCAAG
ATGCCCAAGAAGGCGTTAGAGCTGTGGGGATACGAGTCCTCTCCATTCAC
CAAGGTATGGATCACCGAGGCAAATCTTGTTCCTGCGTTTTTCTCCATGT
GTCTATTGTAAGCCGTAAACACTAGACCCCGTGGAGTCCTCCCATTGTTT
CTGCTGTCCGAAAATGGGGCTAGGAAGTGGCAAATACCGTGTTCTACTTT
CACGCGAACTGTGTCCAACAGTCGATTAGACCCTCCACCGTTCGAAAAGG
CCTTGTTTCCTTGCCGACCAAAACTCGACTTAGCCTGTTTCCTGTTCCTG
TCCCCCTCCGTGGGACGTTTCCTTTGCCCAGGTCGTGCGCGAGAAGCTGT
GCGAGTTAGAGATCCCGCACAAGTTTATTTCTTCCGCACGGGGAAGCCCG
AAGGTATGTGCTTAGGGAGGGGGTGTTCGTCGCTGCTGAATGTCGTCAAA
CGGCGTCACATCACAGTCGCAGCAGGATGCGGAACAGCCTGGAGTTTGGA
AGCTCGGCAGGAATTCTTGAAGGCATTTTATTGCAGAAATTTGGGGGATG
TCGTCCAGAGATTTGTCAAGAACTTTATTTGCTAATTGCTGAAACTCCAG
CCACCCTCAACCCCGGCGACATGGGTTGTATCGTTCGTGCATATTCCGAT
GATGCAATTTTATCTCCACTCCGAAACTACTCCCGCGGCTTCTCTAATCG
CCAACCTCTCTCGCTTCCCTCCTTCGTCCCTTCGTTCACGACAGCGCCAA
CAACTGTACGAGATGGCGGGAGCAGGGCAGACGCCGTACCTGGTAGATCC
CAACACCGGCGCGAAGGGGTACGAGTCCTCAGAAATCAACGACTATCTGG
ACTTGACGTACGCTCTTTGAAACTAAACCTACGACCGTTTTCGGGGGTGG
AGACTATATAGTCTAGCGGCATAAGGCTGAGAAAATTGAGCGTGGCGACC
GAGGTAACCGTACGGTGTTTTCGGGGGTATCTGCTATATCTCGACCAGCT
GAATGTCTGAATAGTGTGGGGTGGCGGCTTGGCGCACCAAGACGCCATCG
AGAAGGTTAGACAGAGTCAAACCGGTTTCTCGCAGTGAGGGCTTGTTCGT
GACAGAGAGATCTCCGGGGGGCACTTTGAAACGGCCCTTTGACTGCAATA
CGTGGAGACCGCGAAATTCGTGAATGTAGGATGCGGGCCCTGAAGGTTCC
CAAGTGTTACGTGGGGTGAGAGGTTGTGGGTATTTCGTTCGCCAACGTTG
TGGAACAATTTTGAAACCCTTTAAATATTGGTGGTCTTGGTGTGGCAGCC
AAACATTCTCAACAGCAGTTTTCTTGCGTCGCCATCTGTCGGTTATGTTT
CGAGCGACAGTCGTCACATCGTACTCGAAACACGATGGAAGCTTATTGTT
GCCGGCGCGTGTTTTTCCACACGCACTCTTCCCT

Coding sequence (CDS) from alignment at C-linearis_contig97:315924..322157+

>mRNA_C-linearis_contig97.17089.1 ID=mRNA_C-linearis_contig97.17089.1|Name=mRNA_C-linearis_contig97.17089.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at C-linearis_contig97:315924..322157+ (Chordaria linearis ClinC8C monoicous)
ATGTACTCCGGTGTGGCCTTAGTCGCTGCTACCGTCTTATGTGGTTTACA
GGGGTCTTTGGGCTTTCTCCCTGTGCCCTCTGTCGCCCCAGCGGTGTCAC
GTCAGCGATATTTCACGGAGGTGAGCATGGCGGTCAAAGTCAATGACCAG
CTTCCTGCTGACGCAAAGCGCTACTATGTTCGCCCGGACAGGATCCTCGA
TGTTGTGACTTCAGCGCCACAGCTTCTGCTCCGACTGGGGAGTGGCGCAT
TGGTGGATGGCTATCGATATGTACTCCGGTGTGGCCTTAGTCGCTGCTAC
CGTCTTATGTGGTTTACAGGGGTCTTTGGGCTTTCTCCCTGTGCCCTCTG
TCGCCCCAGCGGTGTCACGTCAGCGATATTTCACGGAGGTGAGCATGGCG
GTCAAAGTCAATGACCAGCTTCCTGCTGACGCAAAGCGCTACTATGTTCG
CCCGGACAGGATCCTCGATGTTGTGACTTCAGCGCCACAGCTTCTGCTCC
GACTGGGGAGTGGCGCATTGGTGGATGGCTATCGATTCAAAATTTCGAGG
GAGGAGGAAGGAGACGAGGGGGAATACGCGGTTGTCAGGGCTCTGGGCTT
CAAGTCAAAATTTCGAGGGAGGAGGAAGGAGACGAGGGGGAATACGCGGT
TGTCAGGGCTCTGGGCTTCAAGGTGACGGAGAGGGGAAACACCTGGGACA
AACAGCAGCCCCGAAAACCCATCGAGATCTACGAGTTCGAGGGCTGCCCG
TTCTGCCGGAAAGTCAGGGAGGCGGTCAACATCCTCGACCTTGACGTGAT
GTTTTACCCGTGCCCGCAAGGTGACGGAGAGGGGAAACACCTGGGACAAA
CAGCAGCCCCGAAAACCCATCGAGATCTACGAGTTCGAGGGCTGCCCGTT
CTGCCGGAAAGTCAGGGAGGCGGTCAACATCCTCGACCTTGACGTGATGT
TTTACCCGTGCCCGCAAGGCGGGCCGACGTTCCGGCCGAAGGCGAAAGGC
ATGGGAGCCAACGCCTTTCCCTACATGGTGGACCCCAATTCCAAGACCTC
CATGGGAGAAAGCGACGACATCATCAACTACCTCTACGAAACCTACGGCG
AAGGAGCCAAGGCGGGCCGACGTTCCGGCCGAAGGCGAAAGGCATGGGAG
CCAACGCCTTTCCCTACATGGTGGACCCCAATTCCAAGACCTCCATGGGA
GAAAGCGACGACATCATCAACTACCTCTACGAAACCTACGGCGAAGGAGC
CAAGGTTCCGTTCCAGCTGTCGCTTGGAATTGTCACGACCCTCACGGCTG
GTCTTGGAATGCTGCCGCGAGCTCTGAAGGGAGGAAGATACACTCCGGTT
CCGTTCCAGCTGTCGCTTGGAATTGTCACGACCCTCACGGCTGGTCTTGG
AATGCTGCCGCGAGCTCTGAAGGGAGGAAGATACACTCCGGCCAAGATGC
CCAAGAAGGCGTTAGAGCTGTGGGGATACGAGTCCTCTCCATTCACCAAG
GCCAAGATGCCCAAGAAGGCGTTAGAGCTGTGGGGATACGAGTCCTCTCC
ATTCACCAAGGTCGTGCGCGAGAAGCTGTGCGAGTTAGAGATCCCGCACA
AGTTTATTTCTTCCGCACGGGGAAGCCCGAAGGTCGTGCGCGAGAAGCTG
TGCGAGTTAGAGATCCCGCACAAGTTTATTTCTTCCGCACGGGGAAGCCC
GAAGCGCCAACAACTGTACGAGATGGCGGGAGCAGGGCAGACGCCGTACC
TGGTAGATCCCAACACCGGCGCGAAGGGGTACGAGTCCTCAGAAATCAAC
GACTATCTGGACTTGACGTACGCTCTTTGACGCCAACAACTGTACGAGAT
GGCGGGAGCAGGGCAGACGCCGTACCTGGTAGATCCCAACACCGGCGCGA
AGGGGTACGAGTCCTCAGAAATCAACGACTATCTGGACTTGACGTACGCT
CTTTGA