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Homology
BLAST of mRNA_C-linearis_contig96.17050.1 vs. uniprot
Match: A0A6H5KRR0_9PHAE (PlsC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRR0_9PHAE) HSP 1 Score: 435 bits (1118), Expect = 3.270e-141 Identity = 214/253 (84.58%), Postives = 233/253 (92.09%), Query Frame = 3
Query: 222 MAIMDVPTPVALLAGLLAMSLSAHYMTARSKTGVLGKVAALVNMLCFLNASLGVNVVMALIYLFVRPFSSATVRRMNSNFAEAMWADAVSAIMPPAKVVVTGEMPDDDTQAIVIANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIILKDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLLIFPEGTTINQRSMDKSANFAKKEQRPTFERLLLPRTTGFGACLNAFTCAENSG 980
MA+++VPTP+ALL GLLAM+LSAHYMTARSKTGVLGK+AALVNMLCFLNASLGV V+MAL YLFVRPFS++TVRR+NSNFAEAMWADA+SAIMPP+KVVVTGEMPDDDTQAIVIANHQ VDCDWWFLFEL+RPLRRHGALKIILKDDQKH+PVTGWGMRGFGF+FLKRDW+KDRANLE+QLGVFTGDGFPLRLLIFPEGTTIN RSM+K FAKKEQRP FE LLLPRTTGFGACLNAF E+ G
Sbjct: 1 MALVEVPTPLALLGGLLAMALSAHYMTARSKTGVLGKMAALVNMLCFLNASLGVIVIMALTYLFVRPFSASTVRRLNSNFAEAMWADAMSAIMPPSKVVVTGEMPDDDTQAIVIANHQ-------VDCDWWFLFELMRPLRRHGALKIILKDDQKHIPVTGWGMRGFGFVFLKRDWVKDRANLERQLGVFTGDGFPLRLLIFPEGTTINARSMEKCTAFAKKEQRPRFEHLLLPRTTGFGACLNAFRRTESPG 246
BLAST of mRNA_C-linearis_contig96.17050.1 vs. uniprot
Match: K3X6I6_GLOUD (PlsC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6I6_GLOUD) HSP 1 Score: 179 bits (454), Expect = 8.100e-46 Identity = 91/204 (44.61%), Postives = 130/204 (63.73%), Query Frame = 3
Query: 348 NMLCFLNASLGVNVVMALIYLFVRPFSSATVRRMNSNFAEAMWADAVSAIMPPAKVVVTGEMPDDDTQ-AIVIANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIILKDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLLIFPEGTTINQRSMDKSANFAKKEQRPTFERLLLPRTTGFGACLNA 956
N+L FL S +N I+L VRPF +A RR+ ++ +++W D S+ P AK+VVTGE+P D T+ AI+IANHQ VD DWW++++ R + G +KI+LKD K+VP+ GWGMR F F+FL+R D +++ + GD +P L+IFPEGTTI++ + KS FA+K RP F R+LLPRT+G L+A
Sbjct: 10 NLLWFLCNSAVINFCQFTIWLLVRPFDNALYRRLMGSYVQSLWVDVASSCFPEAKLVVTGEIPTDKTRPAIIIANHQ-------VDADWWYIWQAARAYKGAGNIKIVLKDQLKYVPIIGWGMRLFEFLFLRRSIDHDSKHIKAYMDSLIGDDYPFWLVIFPEGTTIHKEYVVKSQAFAEKLNRPKFNRVLLPRTSGLQIILDA 206
BLAST of mRNA_C-linearis_contig96.17050.1 vs. uniprot
Match: W7THY1_9STRA (Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THY1_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.630e-45 Identity = 92/197 (46.70%), Postives = 128/197 (64.97%), Query Frame = 3
Query: 372 SLGVNVVMALIYLFVRPFSSATVRRMNSNFAEAMWADAVSAIMPPAKVVVTGEM----PDDDTQAIVIANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIILKDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLLIFPEGTTINQRSMDKSANFAKKEQRPTFERLLLPRTTGFGACL 950
S G+N++ L+YL VRP+S T RR+ N+ ++MW +S +MPP+++V++G++ D AI+IANHQ VD D+W+ +E+ R + G LKIILK + VPV GWGMR F F FL+R+W +DR L + L F DG LL+FPEGTTIN S+ KS FA+++ RP + LLLPR+TGF ACL
Sbjct: 116 SFGLNILNFLVYLTVRPWSRRTARRLIGNWFQSMWVSVMSYLMPPSELVLSGDVFPKTMDSTRPAIIIANHQ-------VDADFWYCWEVARAHQLQGQLKIILKAELSQVPVVGWGMRQFEFCFLRRNWEQDRRGLTRLLSSFMEDGLNCALLLFPEGTTINTESLAKSHRFAQQQSRPRLKHLLLPRSTGFAACL 305
BLAST of mRNA_C-linearis_contig96.17050.1 vs. uniprot
Match: A0A835ZF56_9STRA (Acyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF56_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.680e-45 Identity = 85/171 (49.71%), Postives = 117/171 (68.42%), Query Frame = 3
Query: 441 RRMNSNFAEAMWADAVSAIMPPAKVVVTGEMPDDDTQAIVIANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIILKDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLLIFPEGTTINQRSMDKSANFAKKEQRPTFERLLLPRTTGFGACLN 953
R++NS +A+ ++ +S ++PP ++VVTG+ D +QAIVIANHQ VD DWW+ + LLR + K ILK D +P+ GWG++G FI L+RDW D+ +L +QL VF D PLRL+IFPEGTT+N S++KS FA+K+ RP +RLLLPRTTGF ACL+
Sbjct: 18 RKLNSQYAQLLFVRGISYVLPPVEMVVTGDEFCDGSQAIVIANHQ-------VDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLD 181
BLAST of mRNA_C-linearis_contig96.17050.1 vs. uniprot
Match: G4YYH8_PHYSP (PlsC domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4YYH8_PHYSP) HSP 1 Score: 174 bits (442), Expect = 3.640e-44 Identity = 89/209 (42.58%), Postives = 128/209 (61.24%), Query Frame = 3
Query: 348 NMLCFLNASLGVNVVMALIYLFVRPFSSATVRRMNSNFAEAMWADAVSAIMPPAKVVVTGEMPDDDTQAIV-IANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIILKDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLLIFPEGTTINQRSMDKSANFAKKEQRPTFERLLLPRTTGFGACLNAFTCAE 971
N+L L S +N + ++ VRPF RR+ + A+A+W D S P K+ V+GE+P D T+ ++ IANHQ VD DWW++++ R G +KI+LKD K++P+ GWGMR F F+FL+R +D A+++K +G DGFP L++FPEGTTI+ + KS FA +E RP FER+LLPRTTG L+A A+
Sbjct: 11 NLLWILCNSACINFLQFCLWCLVRPFDKPLYRRLMGSVAQALWVDVTSTSFPQTKLSVSGELPQDPTRPVILIANHQ-------VDADWWYIWQAARHQSAAGNIKIVLKDQLKYLPIIGWGMRLFQFLFLRRRIDEDAAHIKKYMGGLIADGFPFWLVLFPEGTTIHSEYVVKSQAFAAREGRPKFERVLLPRTTGMQIILDAVADAK 212
BLAST of mRNA_C-linearis_contig96.17050.1 vs. uniprot
Match: A0A3M6VNZ5_9STRA (PlsC domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNZ5_9STRA) HSP 1 Score: 174 bits (440), Expect = 6.770e-44 Identity = 84/207 (40.58%), Postives = 131/207 (63.29%), Query Frame = 3
Query: 339 ALVNMLCFLNASLGVNVVMALIYLFVRPFSSATVRRMNSNFAEAMWADAVSAIMPPAKVVVTGEMPDDDTQAIVI-ANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIILKDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLLIFPEGTTINQRSMDKSANFAKKEQRPTFERLLLPRTTGFGACLNA 956
+++N+L L + +N + +Y VRPF+ R++ + A+++W D SA P K+ +TGE+P D T+ I++ ANHQ VD DWW++++ R + G +KI+LKD K++P+ GWGMR F F+FL+R +D+ ++++ + DGFP L++FPEGTTI+ + KS FA +E RP FER+LLPRTTG L+A
Sbjct: 8 SVLNLLWILCNGVCINFLQFCLYCLVRPFNKVLYRQLMGSMAQSLWIDVASASFPQTKLSITGELPSDPTKPIILLANHQ-------VDADWWYIWQAARQQKAAGNIKIVLKDQLKYLPIIGWGMRLFEFLFLRRRVDQDQEHIKRYMNGLITDGFPFWLVLFPEGTTIHSEYVTKSQTFAAREGRPKFERVLLPRTTGMRIILDA 207
BLAST of mRNA_C-linearis_contig96.17050.1 vs. uniprot
Match: V9ENB2_PHYPR (PlsC domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9ENB2_PHYPR) HSP 1 Score: 172 bits (436), Expect = 2.130e-43 Identity = 87/204 (42.65%), Postives = 127/204 (62.25%), Query Frame = 3
Query: 348 NMLCFLNASLGVNVVMALIYLFVRPFSSATVRRMNSNFAEAMWADAVSAIMPPAKVVVTGEMPDDDTQAIV-IANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIILKDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLLIFPEGTTINQRSMDKSANFAKKEQRPTFERLLLPRTTGFGACLNA 956
N+L L S +N + ++ VRPF+ A RR+ + A+++W D S P K+ VTGE+P D T+ ++ IANHQ VD DWW++++ R + G +KI+LKD K++P+ GWGMR F F+FL+R +D +++K +G D FP L++FPEGTTI+ + KS FA +E RP FER+LLPRTTG L+A
Sbjct: 11 NLLWILCNSACINFLQFCLWCLVRPFNKALYRRLMGSIAQSLWVDVTSTSFPQTKLSVTGELPWDPTKPVILIANHQ-------VDADWWYIWQAARHQQAAGNIKIVLKDQLKYLPIIGWGMRLFQFLFLRRRIDQDAEHIKKYMGGLIADKFPFWLVLFPEGTTIHSEYVTKSQAFAAREGRPKFERVLLPRTTGMQIILDA 207
BLAST of mRNA_C-linearis_contig96.17050.1 vs. uniprot
Match: A0A0L0G5H1_9EUKA (PlsC domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5H1_9EUKA) HSP 1 Score: 170 bits (431), Expect = 1.550e-42 Identity = 101/209 (48.33%), Postives = 130/209 (62.20%), Query Frame = 3
Query: 378 GVNVVMALI---YLFVRPFS-----SATVRRMNSNFAEAMWADAVSAIMPPAKVVVTGEMP------DDDTQ-AIVIANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIILKDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLLIFPEGTTINQRSMDKSANFAKKEQRPTFER-LLLPRTTGFGACLNA 956
G+NV+M + +LF+ P + S+ R SN +AMW D VS +P +V++G+MP DDD AI+I+NH VD DW+ L+ L R HG +KIILKD KH+PV GWGM+ F FIFL RDW KD+ NL K L F D PL LL+FPEGTTI + S++KS+NFAKK R F++ LL PRT GF ACL+A
Sbjct: 26 GLNVLMTSVGINFLFMGPGAIVWSYSSRHYRFFSNILQAMWIDGVSYGLPAPVLVISGDMPPMKQNLDDDVHSAIIISNHT-------VDYDWYCLWLLGRARGYHGVMKIILKDSLKHLPVFGWGMQYFEFIFLARDWSKDKHNLYKLLRSFVHDDMPLWLLLFPEGTTICKESLEKSSNFAKKSGRRVFDKHLLSPRTRGFDACLDA 227
BLAST of mRNA_C-linearis_contig96.17050.1 vs. uniprot
Match: A0A5D6XVN4_9STRA (PlsC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVN4_9STRA) HSP 1 Score: 168 bits (425), Expect = 5.330e-42 Identity = 88/204 (43.14%), Postives = 124/204 (60.78%), Query Frame = 3
Query: 348 NMLCFLNASLGVNVVMALIYLFVRPFSSATVRRMNSNFAEAMWADAVSAIMPPAKVVVTGEMPDDDTQ-AIVIANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIILKDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLLIFPEGTTINQRSMDKSANFAKKEQRPTFERLLLPRTTGFGACLNA 956
N+L L S +N +++L VRP A RR+ + +A+W D + P AK+VVTGE+P D + I+IANHQ VD DWW++++ G +KI+LKD K+VP+ GWGMR F F+FL+R D A+++ + GD +P L+IFPEGTTI+Q + KS FA+K RP FER+LLPRT+G L+A
Sbjct: 10 NLLWILCNSAVINFCQFVLWLLVRPLDGALYRRLMGSLVQALWVDVAATCFPDAKLVVTGEVPKDTARPVIIIANHQ-------VDADWWYIWQ--------GNIKIVLKDQLKYVPIIGWGMRLFEFLFLRRSIDHDSAHIKAYMDSLIGDDYPFWLVIFPEGTTIHQEYVAKSQAFAEKLNRPKFERVLLPRTSGLQIILDA 198
BLAST of mRNA_C-linearis_contig96.17050.1 vs. uniprot
Match: H3GD51_PHYRM (PlsC domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GD51_PHYRM) HSP 1 Score: 166 bits (419), Expect = 3.900e-41 Identity = 84/204 (41.18%), Postives = 124/204 (60.78%), Query Frame = 3
Query: 348 NMLCFLNASLGVNVVMALIYLFVRPFSSATVRRMNSNFAEAMWADAVSAIMPPAKVVVTGEMPDDDTQAIVI-ANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIILKDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLLIFPEGTTINQRSMDKSANFAKKEQRPTFERLLLPRTTGFGACLNA 956
N+L L S +N + ++ VRPF+ RR+ + A+A+W D S P K+ V+GE+P D + ++I ANHQ VD DWW++++ R + G +KI+LKD K++P+ GWGMR F F+FL+R +D +++K + D FP L++FPEGTTI+ + KS FA +E RP FER+LLPRTTG L+A
Sbjct: 11 NLLWILCNSACINFLQFCLWCLVRPFNKPLYRRLMGSVAQALWVDVTSTSFPRTKLSVSGELPSDPQRPVIILANHQ-------VDADWWYIWQAARYHKAAGNVKIVLKDQLKYLPIIGWGMRLFQFLFLRRRIDQDEEHIKKYMNGLITDDFPFWLVLFPEGTTIHSEYVTKSQVFAAREDRPKFERVLLPRTTGMQIILDA 207
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 440.7 |
| Seed ortholog evalue | 5.2e-121 |
| Seed eggNOG ortholog | 2880.D7G4B3 |
| Preferred name | LPGAT1 |
| KEGG rclass | RC00004,RC00037 |
| KEGG ko | ko:K13514,ko:K15176 |
| KEGG Reaction | R09036 |
| KEGG Pathway | ko00564,map00564 |
| Hectar predicted targeting category | signal peptide |
| GOs | GO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010565,GO:0012505,GO:0016020,GO:0016021,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0019216,GO:0019217,GO:0019222,GO:0019637,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031984,GO:0036148,GO:0036149,GO:0042171,GO:0042175,GO:0042304,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045723,GO:0045834,GO:0045923,GO:0046471,GO:0046486,GO:0046488,GO:0046889,GO:0046890,GO:0047144,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0062012,GO:0062013,GO:0065007,GO:0071617,GO:0071704,GO:0080090,GO:0090407,GO:0098827,GO:1901576 |
| EggNOG free text desc. | 1-acylglycerol-3-phosphate O-acyltransferase activity |
| EggNOG OGs | COG0204@1,KOG1505@2759 |
| COG Functional cat. | I |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01004,ko03021 |
| Exons | 9 |
| Model size | 2614 |
| Cds size | 834 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930826.2574315-UTR-C-linearis_contig96:502481..502702 | 1622930826.2574315-UTR-C-linearis_contig96:502481..502702 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 502482..502702 + |
| 1690881269.9288888-UTR-C-linearis_contig96:502481..502702 | 1690881269.9288888-UTR-C-linearis_contig96:502481..502702 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 502482..502702 + |
| 1622930826.3963344-UTR-C-linearis_contig96:506463..506470 | 1622930826.3963344-UTR-C-linearis_contig96:506463..506470 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 506464..506470 + |
| 1690881270.0060506-UTR-C-linearis_contig96:506463..506470 | 1690881270.0060506-UTR-C-linearis_contig96:506463..506470 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 506464..506470 + |
| 1622930826.4645789-UTR-C-linearis_contig96:507491..507608 | 1622930826.4645789-UTR-C-linearis_contig96:507491..507608 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 507492..507608 + |
| 1690881270.017736-UTR-C-linearis_contig96:507491..507608 | 1690881270.017736-UTR-C-linearis_contig96:507491..507608 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 507492..507608 + |
| 1622930826.4818063-UTR-C-linearis_contig96:508008..508082 | 1622930826.4818063-UTR-C-linearis_contig96:508008..508082 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 508009..508082 + |
| 1690881270.0287316-UTR-C-linearis_contig96:508008..508082 | 1690881270.0287316-UTR-C-linearis_contig96:508008..508082 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 508009..508082 + |
| 1622930826.4969406-UTR-C-linearis_contig96:508693..510054 | 1622930826.4969406-UTR-C-linearis_contig96:508693..510054 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 508694..510054 + |
| 1690881270.0388498-UTR-C-linearis_contig96:508693..510054 | 1690881270.0388498-UTR-C-linearis_contig96:508693..510054 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 508694..510054 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930826.2777681-CDS-C-linearis_contig96:502702..502800 | 1622930826.2777681-CDS-C-linearis_contig96:502702..502800 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 502703..502800 + |
| 1690881269.9423697-CDS-C-linearis_contig96:502702..502800 | 1690881269.9423697-CDS-C-linearis_contig96:502702..502800 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 502703..502800 + |
| 1622930826.2940464-CDS-C-linearis_contig96:504331..504461 | 1622930826.2940464-CDS-C-linearis_contig96:504331..504461 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 504332..504461 + |
| 1690881269.954721-CDS-C-linearis_contig96:504331..504461 | 1690881269.954721-CDS-C-linearis_contig96:504331..504461 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 504332..504461 + |
| 1622930826.3098435-CDS-C-linearis_contig96:504768..504912 | 1622930826.3098435-CDS-C-linearis_contig96:504768..504912 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 504769..504912 + |
| 1690881269.9664388-CDS-C-linearis_contig96:504768..504912 | 1690881269.9664388-CDS-C-linearis_contig96:504768..504912 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 504769..504912 + |
| 1622930826.328806-CDS-C-linearis_contig96:505419..505586 | 1622930826.328806-CDS-C-linearis_contig96:505419..505586 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 505420..505586 + |
| 1690881269.9752827-CDS-C-linearis_contig96:505419..505586 | 1690881269.9752827-CDS-C-linearis_contig96:505419..505586 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 505420..505586 + |
| 1622930826.3571625-CDS-C-linearis_contig96:505876..506003 | 1622930826.3571625-CDS-C-linearis_contig96:505876..506003 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 505877..506003 + |
| 1690881269.9850643-CDS-C-linearis_contig96:505876..506003 | 1690881269.9850643-CDS-C-linearis_contig96:505876..506003 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 505877..506003 + |
| 1622930826.37915-CDS-C-linearis_contig96:506295..506463 | 1622930826.37915-CDS-C-linearis_contig96:506295..506463 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 506296..506463 + |
| 1690881269.9952257-CDS-C-linearis_contig96:506295..506463 | 1690881269.9952257-CDS-C-linearis_contig96:506295..506463 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 506296..506463 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17050.1 >prot_C-linearis_contig96.17050.1 ID=prot_C-linearis_contig96.17050.1|Name=mRNA_C-linearis_contig96.17050.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=278bp
MAIMDVPTPVALLAGLLAMSLSAHYMTARSKTGVLGKVAALVNMLCFLNA SLGVNVVMALIYLFVRPFSSATVRRMNSNFAEAMWADAVSAIMPPAKVVV TGEMPDDDTQAIVIANHQARNYHSQVDCDWWFLFELLRPLRRHGALKIIL KDDQKHVPVTGWGMRGFGFIFLKRDWLKDRANLEKQLGVFTGDGFPLRLL IFPEGTTINQRSMDKSANFAKKEQRPTFERLLLPRTTGFGACLNAFTCAE NSGAGGGDGGGGGGRTGGAEVLEPCGV* back to topmRNA from alignment at C-linearis_contig96:502482..510054+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig96.17050.1 ID=mRNA_C-linearis_contig96.17050.1|Name=mRNA_C-linearis_contig96.17050.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7573bp|location=Sequence derived from alignment at C-linearis_contig96:502482..510054+ (Chordaria linearis ClinC8C monoicous) CTCCCGCAAAACACGCCCGGCAGGTGCCTCCTTGGCACCGAAGGACAGCA
TAAAGGAGGTACAGGGCGCTGGTCTTTCGGCTCCCGGGCGCGCGCCGAAC
GCAAAGGAGAGAGAAAAGAGAGAAGGCTTTTGGGGATCGGATCCCTTGTG
CGCACGTGTCTTGGACGTTTTGCAGACAGCGGCGACAGAGCGCGCGCGCG
AGAGCTTCGTGTCGGGAGGCGATGGCGATCATGGACGTGCCTACACCCGT
TGCACTCTTGGCTGGATTGCTGGCGATGTCTCTGAGTGCACATTACATGA
CCGCACGCAGCAAGACGGGGTGAGTTTAGAAACTCGCTTCGCTCGAATAA
ATGAGCTGGAAATCTTGAACCTGAAGATAGATACTCTGCACACAGAAGTA
GTGCATCAATCAAGCCTCAGTGCCTCCGCTGCTCCTGCTGAGCCTGCACC
ACGGTCAGGGAGAATGAAACCAGCGCAGCTTTCAGTTTTAGCAAGCTTGA
TGCCGCTGGACCTGCAGTTTATTCTTTTCAGCACTATCAATACGTACGCA
CTGACACGATACAGCAGTACACGTTTTTCATAAACCTTATCGAAAAGGGT
CGGTTCTCGTCGCGTCTCAGCCACCGCCTGTTTTCGTTACAGTACAGAGC
AGCAGCGTACTTGTAGCGCTTCATCGTGCACTCACACCCCCTGCTTCAGC
AAAAATTTCGGCGGTTTATCCCGTATCCCGTCGTGACACATTTCCTGTGA
CAGAACGAAGTGCAGTTTCTCTCTCCGAAGCCAATGGGACATCGATGCGC
CTTATTTATACCTCTGGCGGATGTCACTCCGCTACTACTCCATCGAGCAG
AGCATGCAGTGTTTTTGTCTCTTCGAAGCGAGAGCGTGTGTACACATGTG
GCACGAAGCTGAGCCCTTGTGAGTAGCTTTTACTGCTACGTCTTCGGTGT
GTGCGGTTTGCACCATGAGCGAATGCATGGCCTCTTTTGCGCAACACCAT
GAGCAACTTTCAAAATCTCGAATGGGTTGGTTTTTAAATTCGTACTGCCT
GTAGGTGCGTTCCCTGCCCCTGGTGTTTACAACCAGTAGATACCCTTTCG
GATGCCCTGACTGAAGGAATCACGTCATCTCTTATCTACACAGTTCCTTG
CGCCTACCACCACCAGCGTGTTGTTTTCACTGTATTGGGACGAGCTCCTG
CTTTGCATCAAAGACGATCACCCGATACCTCAAGTCGTCTCCCGGCCGGA
GCCCCGAGGTACGCAGATCTTGCGCGGTACTGCTGTACACCACGATATCT
TCCTCGAGCGTGGGTTAAGAGATTGCTGCTGCTGTTGGTGGGAACCAACA
CTGCTGTGCTTGCAGCAAAATATGGGCCCAGCGGAATTTGAAGTTGGTGC
ATCCGCTACCCTTGAGCTTCAAATGTCGCTGGTTTTCTCTCTTGGAACGG
GCAGGGTTAAAGGGTTTTGTGTCGTGTTAATTGTCTCACTAAGTACGTGA
GGGACGGCCTGTTGGACACCGGCGCTGTGTTGGGTCTGATCGCTACACAC
TACACACTAGTCTGGCAACCTTAACAGCAGTCTACTTTGGCATGGACGCT
CTCTAGTTGGGTCTGATCCCTACACACTAGACTGGCCGAAGCAGTCACGA
GTCTGGCAACCTCAACAGCAGGCTACTTTGGCATGAACGCTGAAGACCTC
CCGTTGTGTCGCTGTGTAAAATCGCCCACAAACAACCCCCATCAGCACGT
CACGCATCTAGGCGACCTGGCCGTTAATTCAACCAAACACAACTATTTAC
GCGCGTGTGTGCCGTAAACCATACCTGATATGCTTTTCGTTGTCGGGCAG
GGTGCTTGGCAAGGTGGCCGCACTGGTGAACATGCTGTGCTTCCTGAACG
CGTCCCTGGGAGTCAACGTGGTGATGGCGCTGATCTACCTCTTCGTTAGA
CCCTTCAGCTCCGCCACCGTGCGCAGGATGGTGAGACAGAGAGGCAGACG
AGAGGCACAAGGGGGGCAGTGGGACAGCGGGAGGTGCTTAGTACGCATTG
GGCGGTGTGCTTCGGCGTTGAGGCCTTCAGGACCACCTCGCGCTTTACGT
ATCAAACCAACCAGTCATCATCGGCACACGAAGCCACACCACAACTTGTT
TTGGCGAACACGTGAGCTGTGTGACGTTCGACCTTGGGAAACGTTTCAGG
AGAGCTGTTGGAACCGTGCTTTCAACCTTCACCCCCCATACTTTCCCCCT
TGTGCGTTATCTGATGTATCCTGTGTGTAACGATCAGAACTCGAATTTTG
CGGAGGCGATGTGGGCGGACGCGGTGAGCGCGATCATGCCGCCGGCGAAG
GTGGTGGTGACGGGGGAGATGCCGGACGACGACACACAGGCCATCGTTAT
CGCCAACCACCAGGCGAGAAACTATCATAGCGTGGTTGTTGTTGGGCTGC
TGTCATCGACGCAGTATTGTAGTGTAGTTGTTGTTAGGCTCGGTTTTGGG
TAGTGGTGTTGTTGACTTATGATGAGGATGAGAGTCAACGAGGGCCCTGC
TAAAGTGTTTTCAGGGGGGTTTCGTGTCGTTGCTTTGGGGCCGTATCCCC
CCCCCCCCCATACGAAGTATACCCCCAACACAGCAGGTGATGTGCTTACG
TTCGAATGGGCGGCGAACGGGTCCCCAGTCTTAACACCGTGCCAAGCCTT
GCTTCTTTCTCGCTGTTGCTGTTGCAAGGGTTTTGGTGGAAGGTTTCTTC
TTTGTTTGGTTCTGGTTCCACAAAACAAGCAACGAAAAAGGAGGTTCTCT
GTTGCGGTATATATCTCAGCCAATGGTCTTTGTTCGTTCATGCGCGACGG
TTCAGCTTGCTGACCGGGGTGCTCCCTCATCCTCTGCTCTCGCTGCAACT
CATACCTGTCTGGCTGTCTGGCTGTCTGCCGGTTCAAGCAGGTAGACTGC
GACTGGTGGTTTCTGTTCGAGCTGCTGCGACCGCTGCGGCGGCACGGCGC
TCTGAAGATCATCCTGAAGGACGACCAGAAGCACGTCCCCGTGACCGGCT
GGGGCATGCGCGGCTTCGGTTTCATCTTCCTCAAGAGAGACTGGCTCAAG
GACAGGTGGGTTGTCTACCCAGCAGTGGCGGGGAGAGAAGGGACACTGCG
CGTGTAGCCGGTTATTTGATCGATGTTGTCGTTGCTGCACATCCTCCGGC
CGGCCCGCCCCCGCCGACGTTGGCGCTTCTGCTGCCAGAAATCTGCAATG
GTGTGCTGTAGGTGCTGTAGGTGCTGTAGGTGCTGTTGCTGCTGTTGCTA
CTGTTGCTGCTGGCATTCAGTTTCTTCTGGTTGCCTTTTTATTGCTCGTG
ACTCCTGCGTTGTGTCTTCGGTGCGGGCGGCGTGTTTGGTCGCAGGGCTA
ACCTGGAGAAGCAGCTGGGCGTGTTCACCGGCGACGGGTTCCCTTTGCGG
CTGCTCATCTTCCCCGAAGGGACCACCATCAACCAGCGCTCGATGGACAA
GAGCGCCAACTTTGCCAAGAAGGTACGCATACTTGGTTGTTGTGCATCCA
TTAGAAATTCTGCACGAGTCTGTAAGCCAGCGCAAGCCATTTGGCTTGAG
ATTATTTTCTCTGGGTTATGTCGGCTAACAGGACGCGGTATCGCAGGGGC
GGGTCTCCGTGTGTGGTTGTTCTCGAGATGTGTACTCTGTGTTTCTTCAG
TTAGAGTGGCGTCACCCCCCCCACTTGCACACAGCAGCGCAGTGCTTCTT
ACTATATAACTTTTGCCCCCCACCCCGCCCTGTCCCGCGCCTCCAATAAC
CACAACCACGACAGGAACAACGGCCAACGTTCGAGCGCCTCTTGCTGCCG
CGAACGACGGGGTTCGGCGCTTGCTTGAACGCCTTCACTTGCGCCGAAAA
CTCGGGGGCCGGCGGAGGCGATGGCGGGGGGGGGGGGGGAAGAACAGGGG
GGGCGGAGGTGCTCGAACCGTGTGGTGTATGACGTGACGGTGAGTCTTGG
TAGGCTACAGTGTGTCTTCGGGATGTGGGCTTGGCCGCTCAGTGAAGACG
GTCCTGTCTCTTGTGTGTGTACGCTTGTGGCGAGGGCCATGGGCGGGGCC
CTAACTCGCCGCTTCCAGTCGTGGCTTAATATATATTTTATTTTTATACA
TCTGGATGGTCCGTTCGCAAGGCACTGGTCTCGGGATCGACGTTTTTTTT
TTTTTTTTTTTAACCTATTCAAACCTGCCTGCGTTTGGGTGCTCTGGACG
CGCTACAAGATAATGATAGTCGACGATACCGTGCATGACGTTCTTTCGTT
ATTTCAGTCCAGACAGCAAGGGCCGTTGTCGCTGAGATGGGGATTGACTT
TTTTTTTTTTATTCTTGGTGGCGACGGCTTTTTTTTTCTGTCGCGCTGGT
GCTCTCGTTCTGCCTCCGTTCTAAGAGAACGAAATAGGTTGGTGGCGTTC
TTTCGCGGGGCCGATGCTAGATCGTCGCCTCACTACTCTACCCTCACCCA
AATCCCAAACCTCTCACACAAGCGTTGGGCCTGCTTTGTTTATTAGCTGC
TGATGTTGCATTTTTTTTCACGACCCACCCCGAGCTCTGCAAGGTTGTTT
TTGCACGTACCCGTCCCATCCACCCCTTCCGTCACCCGCACTTTTTGTTG
GAGGTACGTCCAGCACGATTTTTGCAGGCCTCCTTTGTTTGGGGGCGTTG
TCTCGTTGTCCCTCTGCCCAGATCGCTGTCGTTGCTGACAGCGGGCAGAT
GGGCACGGTTGTGTGCGTTACCCCCCTGCCCGCTACGTTTATTTATTCTC
CAACTTTCCGACTTCCAGACACGACACGGCCGAAAAGCATCTTCCGCATC
TGGAAGTGTCTCGTTTCGCCCCGATCCGATGTCTTGACCATCCATCGCAT
CCCATCTCATGGCGTCGCCGTCCTTCCTGCTCTGTTGTTTTCTCTCCCTC
CCCGTCCCCGTCCCCCTCCGCCTCCGCCTCGGCCTGTGTCTGTGTGTCTT
GTCTCTCCAGATGGCGTACAGTGGCTACAGCGGGGAGATCCCCACCTGGG
AGATGGGCTACACGCGGGATAGGGACGTCGACATCCCCAACCTGGGGGCC
CTGCTCAAGGGCCGTGCTCCCGGACCGGTGTGTGTCTACAGCACTTGTTT
GTTTGTTGTTGTTGACTTAAGAGTTTTGTTTGCAACCTCGTGGCCACGGT
TGCGCCGTGGTTTGCCGTTTTTCCGGAAACGTGTGTCTCTCTGATATAGT
GCGTAAGTAGTTGCGTTTTACCTCCCTTCGGCTCCTCGGAGCGTGGCACG
GACAACTTCCACACTAACGCGCAAGATGCGTTCGCGCGCCCTTTCTTGCG
GGCATCCGTCACCGCAGGGTAGTCTTTCCCAGATCACCATCCAGAGATGG
ACGTCGATAGTAGGATCAGACGTTTCTTGTGCTTTTCCTTTGTCGACCGT
GTGCACGTCGATCGCCCGGCACTTGTTCTCGCCCCGGGCGGAACCATCCG
CGAAATCGTTTGTTTTTTATTTTCCAGGTGCACCTTCACGTAGAGAAGCA
CCACGTTGAGGACATCGCCGGGGACGGAAAGGCCTGGCTCGATGCCACCT
GGTGAGTCCGTTTCATTCCCCGATCTCCGAAGATCATAGTCGATGTCACG
CAATCTTAATCTTTGGTCGGTCTCGACGCGCATGGCACCGAACCCCTGAC
AATCGAAGCACAGCCGGTGCGTGGCTAGTTTGTTTTGAGTGCGCTGCTTT
GGGTCACAGACCATCCATCTACGACCCGGCTTGGGGGGGAGGAATTGGAA
AAGTCGCTACTGCCACGAACTTGCGTCGGACTTGCAATTTGTTCGTTTGA
CCCGAGAGCTTTCGTTCACGATCTCGAACCTCCATGAGTGCCTCAACGGC
AGGACCGTAGTTTGCGGTATCACCGAGGGCCGCGAATCTGTTTCAACACC
TCCTGAAAGTCCAAACCGGCCACCAGCCGGGGAAAGCCCTAGACAAGGAG
CCTTAAGCACGAACACAGCGGGCGATGCTGGGTCCAATGTTGATATAGTA
TTCCAAGCTTTCTGCACGCTTCACAGTTTCCCCGCCCGAAACCCACCTGC
TGCTCCTCGTAGACCGCGGCCCGGCTCGTCCCCCACACTCGCACCCCCTC
ACTTCGCCACGAATCCCCTCGTTTGCCACGCGCGACCCGTTGCCAAACCT
CGCTCCCTGCAGGGCCCGCAAGGACGCGCTCTTGCAGAGGTTCATCGAGG
ACGGTCGTTTCCCGCACCAACCGGTGGCCGTCTACGAGTCGCGGAAGAGC
CCGATGGCCTTCCTGTCCCTGTCCGCTACGCCCATCGTCGCCTTCCTGCT
GCTCTACTACGGCATCACCGACGCCGTGGCGCTGCTGGCGGCGGCGGGGG
TGACCGCGGCGGCGGGCGGGGGCGGCGGCGGCGGCGGCATCGTGGAGGGC
ATCACCGAAGGCGCTGCTGCCGCTGCGTCCGGGTCAATAAGCGCATAGGT
GGCAGTATGTAATGTAGGGCCTCGACTTGTTGTGTTGGCCGCAAATCGAA
AGCGTAGAGGAGCGGTCTAAACCTTGCTTGTTGAACCCGGAACAAAGCGT
ACAAGGGGCGGGAAGGAGGGCTTTTCGATTTTTTGTGGGATTTCGGAATC
CGGAAATTTTGACGTTTTTTGTTTCGGGGGCACGTGCGGATCTCGATCGG
GACCACAACACGCTCTTTATCGGAAAACGTGAGTTCGGCGAAGTATGTGG
TGTGCGTTTGTTGACCAAGTCTTGTGTGTCTTGTGCGTTTCGTCGGCCCC
TATACCAGATGGTGGCATGCGTTGCTCACGCATGAACACACTTGAACGCT
CGGAATGTGTGATAGATAGAATGCCTTGTCGTACGATGTGGGGGCGGCAG
TAGCAGCAACCCCGCCCTTTGCTCGGGCAAGTAAGTTTTGCAAGTCGGAG
CCGGTCTGGGTGGTGACGGCGGCCGTTTTTTGAGCAGGAAGAGCCCGAAG
TGGCTTTGCTGCTGCTGCTGCTGCTGCTGTCAAGTTGCGTGTGGGCCGGA
TGCCTAAGGCGAGATGGGACAATGCGATGAACAGGGTGAATCAGGAGTAG
CGTACCAGTGATTTGTATGGCGCTGCTGCTTGGCTGAAAATTTCAATTTT
CGTTCTTTGGGGCAGCGGATTGGGCGTCCCTCTCACTTCTCATATTGTAT
GTGTTTGCCACTCCTGTCGCGTTAATTTTTGCATTATTAAGACCCAGGTG
TTCTCTGAACATCTCTGTCTGGAGCTGTTGTAGTCTCGGGGAGTATCTGT
TGCTTGGTGTCATCTCGTATGTATGGCGGTCGCCTACATGAAATCCCGGC
GTTGTACGCGCGAAAGTAGCTTATTAGCGCAGTTCTGCCGATGACGCTCA
CTGCCAGGGCACGCGAAATATGAGCAATGGGCTCTTGTTGACGTGTTCCA
TAAAATATGGCATCTACACAGAGGATACGAATGCTGCCCCCCCCAGCGTC
CACTGGTTGGTGAACGTACCGCCCGTCGATCGTGCTCCACGTACATTTCA
AGCTGGCTCTTTGCCGTTGACGT back to topCoding sequence (CDS) from alignment at C-linearis_contig96:502482..510054+ >mRNA_C-linearis_contig96.17050.1 ID=mRNA_C-linearis_contig96.17050.1|Name=mRNA_C-linearis_contig96.17050.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1668bp|location=Sequence derived from alignment at C-linearis_contig96:502482..510054+ (Chordaria linearis ClinC8C monoicous) ATGGCGATCATGGACGTGCCTACACCCGTTGCACTCTTGGCTGGATTGCT GGCGATGTCTCTGAGTGCACATTACATGACCGCACGCAGCAAGACGGGAT GGCGATCATGGACGTGCCTACACCCGTTGCACTCTTGGCTGGATTGCTGG CGATGTCTCTGAGTGCACATTACATGACCGCACGCAGCAAGACGGGGGTG CTTGGCAAGGTGGCCGCACTGGTGAACATGCTGTGCTTCCTGAACGCGTC CCTGGGAGTCAACGTGGTGATGGCGCTGATCTACCTCTTCGTTAGACCCT TCAGCTCCGCCACCGTGCGCAGGATGGGTGCTTGGCAAGGTGGCCGCACT GGTGAACATGCTGTGCTTCCTGAACGCGTCCCTGGGAGTCAACGTGGTGA TGGCGCTGATCTACCTCTTCGTTAGACCCTTCAGCTCCGCCACCGTGCGC AGGATGAACTCGAATTTTGCGGAGGCGATGTGGGCGGACGCGGTGAGCGC GATCATGCCGCCGGCGAAGGTGGTGGTGACGGGGGAGATGCCGGACGACG ACACACAGGCCATCGTTATCGCCAACCACCAGGCGAGAAACTATCATAGC AACTCGAATTTTGCGGAGGCGATGTGGGCGGACGCGGTGAGCGCGATCAT GCCGCCGGCGAAGGTGGTGGTGACGGGGGAGATGCCGGACGACGACACAC AGGCCATCGTTATCGCCAACCACCAGGCGAGAAACTATCATAGCCAGGTA GACTGCGACTGGTGGTTTCTGTTCGAGCTGCTGCGACCGCTGCGGCGGCA CGGCGCTCTGAAGATCATCCTGAAGGACGACCAGAAGCACGTCCCCGTGA CCGGCTGGGGCATGCGCGGCTTCGGTTTCATCTTCCTCAAGAGAGACTGG CTCAAGGACAGCAGGTAGACTGCGACTGGTGGTTTCTGTTCGAGCTGCTG CGACCGCTGCGGCGGCACGGCGCTCTGAAGATCATCCTGAAGGACGACCA GAAGCACGTCCCCGTGACCGGCTGGGGCATGCGCGGCTTCGGTTTCATCT TCCTCAAGAGAGACTGGCTCAAGGACAGGGCTAACCTGGAGAAGCAGCTG GGCGTGTTCACCGGCGACGGGTTCCCTTTGCGGCTGCTCATCTTCCCCGA AGGGACCACCATCAACCAGCGCTCGATGGACAAGAGCGCCAACTTTGCCA AGAAGGGCTAACCTGGAGAAGCAGCTGGGCGTGTTCACCGGCGACGGGTT CCCTTTGCGGCTGCTCATCTTCCCCGAAGGGACCACCATCAACCAGCGCT CGATGGACAAGAGCGCCAACTTTGCCAAGAAGGAACAACGGCCAACGTTC GAGCGCCTCTTGCTGCCGCGAACGACGGGGTTCGGCGCTTGCTTGAACGC CTTCACTTGCGCCGAAAACTCGGGGGCCGGCGGAGGCGATGGCGGGGGGG GGGGGGGAAGAACAGGGGGGGCGGAGGTGCTCGAACCGTGTGGTGTATGA GAACAACGGCCAACGTTCGAGCGCCTCTTGCTGCCGCGAACGACGGGGTT CGGCGCTTGCTTGAACGCCTTCACTTGCGCCGAAAACTCGGGGGCCGGCG GAGGCGATGGCGGGGGGGGGGGGGGAAGAACAGGGGGGGCGGAGGTGCTC GAACCGTGTGGTGTATGA back to top
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