prot_C-linearis_contig96.17048.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig96.17048.1
Unique Name	prot_C-linearis_contig96.17048.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	143

Homology

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: D7G4B1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4B1_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 4.900e-103
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
            MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY
Sbjct:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A835Z237_9STRA (Mitosis protein DIM1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z237_9STRA)

HSP 1 Score: 266 bits (679), Expect = 9.120e-90
Identity = 123/142 (86.62%), Postives = 134/142 (94.37%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
            M+YLL HL +GWAVDQAI+ EEER V +RFGHD+D TCMQMDEVL+GIAEDVKNF  IYVVD+S+VPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+EVVYRGARKGRGLVVSPKDYSTKY+Y
Sbjct:    1 MAYLLAHLTSGWAVDQAILKEEERAVVIRFGHDYDPTCMQMDEVLSGIAEDVKNFAVIYVVDISQVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIEVVYRGARKGRGLVVSPKDYSTKYRY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: H3G9C0_PHYRM (Uncharacterized protein n=32 Tax=Oomycota TaxID=4762 RepID=H3G9C0_PHYRM)

HSP 1 Score: 265 bits (677), Expect = 1.840e-89
Identity = 119/142 (83.80%), Postives = 133/142 (93.66%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
            MSYLLPHL +GWAVDQAI+NE +RVV +RFGHDHD TCMQMDEVL G+AEDVKNF AIYVVD++EVPDFN MYELYDPCTVMFFFRNKH+MIDLGTGNNNKI+WAFNNK EM+DI+E VYRGARKGRGLV++PKDYSTKY+Y
Sbjct:    1 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDSTCMQMDEVLCGVAEDVKNFAAIYVVDITEVPDFNTMYELYDPCTVMFFFRNKHVMIDLGTGNNNKINWAFNNKSEMVDIIETVYRGARKGRGLVIAPKDYSTKYRY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A7S3HQX3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQX3_9STRA)

HSP 1 Score: 265 bits (676), Expect = 4.060e-89
Identity = 120/142 (84.51%), Postives = 134/142 (94.37%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
            MSYLLPHLR+GWAVDQAI+NEE +VV +RFGHD D TCM+MDE+L GIA+DVKNFC+IY+VD+SEVPDF  MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct:   14 MSYLLPHLRSGWAVDQAILNEESKVVLIRFGHDWDTTCMEMDEILFGIADDVKNFCSIYLVDLSEVPDFTTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 155

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A7S2HED9_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2HED9_9STRA)

HSP 1 Score: 262 bits (670), Expect = 2.220e-88
Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
            MSYLLPHL+TGW+VDQAI+NEE+RVV  RFGHD+D  CMQMDEVL GI +DVKNF  IYV+D+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFN+KQEMIDI+E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct:    2 MSYLLPHLQTGWSVDQAILNEEDRVVVCRFGHDYDPVCMQMDEVLCGIVDDVKNFAVIYVIDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNSKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY 143

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A812WHX6_SYMMI (YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812WHX6_SYMMI)

HSP 1 Score: 260 bits (665), Expect = 1.240e-87
Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
            MSYLLPHL +GWAVDQAI+NEE+RVV +RFGHD D TCMQMDE+L  IA+DVKNF  IY VD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+EVV+RGARKGRGLV+SPKDYSTKY+Y
Sbjct:    1 MSYLLPHLNSGWAVDQAILNEEDRVVVIRFGHDWDTTCMQMDEILCNIADDVKNFAVIYCVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIEVVFRGARKGRGLVISPKDYSTKYRY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A5D6XYK2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYK2_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.380e-87
Identity = 119/142 (83.80%), Postives = 133/142 (93.66%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
            MSYLLPHL +GWAVDQAI+NE +RVV +RFGHDHD TCMQMDEVL+G+AEDVKNF  +YVVD+++VPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNK EMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct:   87 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDPTCMQMDEVLSGVAEDVKNFAVVYVVDITQVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKLEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 228

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A0M0JAP0_9EUKA (Thioredoxin-like protein 4a n=2 Tax=Prymnesiales TaxID=73028 RepID=A0A0M0JAP0_9EUKA)

HSP 1 Score: 254 bits (650), Expect = 2.410e-85
Identity = 118/142 (83.10%), Postives = 131/142 (92.25%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
            MSYL+PHL TGWAVDQAI++EE+RVV LRFGHD+D TCMQMDEVL GIAE VKN+  IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WA  +KQEMIDI+E +YRGARKGRGLVVSPKDYSTKY+Y
Sbjct:    1 MSYLMPHLNTGWAVDQAILSEEDRVVVLRFGHDYDPTCMQMDEVLYGIAELVKNYAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAIPDKQEMIDIVETIYRGARKGRGLVVSPKDYSTKYRY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A482V1I6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V1I6_9ARCH)

HSP 1 Score: 254 bits (649), Expect = 3.430e-85
Identity = 115/142 (80.99%), Postives = 130/142 (91.55%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
            MSYLLPHL +GWAVDQAI+NEE +VV +RFGHD D TCM+MDEVL  +AEDVKNF  IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIM+D+GTGNNNKI+WA NNKQE+IDI+E VYRGA+KGRGLV+SPKDYSTKYKY
Sbjct:    1 MSYLLPHLHSGWAVDQAILNEENKVVVIRFGHDWDPTCMEMDEVLFHLAEDVKNFAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMVDMGTGNNNKINWALNNKQELIDIIETVYRGAKKGRGLVISPKDYSTKYKY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A3R6ZPY4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZPY4_9STRA)

HSP 1 Score: 261 bits (667), Expect = 9.200e-85
Identity = 119/142 (83.80%), Postives = 132/142 (92.96%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
            MSY+LPHL TGWAVDQAI++E ERVV +RFGHDHD  CMQMDEVL GIAEDVKNF  +YVVD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNK+EMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct:  225 MSYMLPHLCTGWAVDQAIMSEGERVVVMRFGHDHDPVCMQMDEVLCGIAEDVKNFAVVYVVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKKEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 366

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot

BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G4B1_ECTSI	4.900e-103	100.00	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z237_9STRA	9.120e-90	86.62	Mitosis protein DIM1-domain-containing protein n=1...	[more]
H3G9C0_PHYRM	1.840e-89	83.80	Uncharacterized protein n=32 Tax=Oomycota TaxID=47...	[more]
A0A7S3HQX3_9STRA	4.060e-89	84.51	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7S2HED9_9STRA	2.220e-88	84.51	Hypothetical protein n=3 Tax=Dictyochophyceae TaxI...	[more]
A0A812WHX6_SYMMI	1.240e-87	83.10	YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A81...	[more]
A0A5D6XYK2_9STRA	1.380e-87	83.80	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A0M0JAP0_9EUKA	2.410e-85	83.10	Thioredoxin-like protein 4a n=2 Tax=Prymnesiales T...	[more]
A0A482V1I6_9ARCH	3.430e-85	80.99	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]
A0A3R6ZPY4_9STRA	9.200e-85	83.80	Uncharacterized protein n=2 Tax=Aphanomyces invada...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004123	Dim1 family	SMART	SM01410	DIM1_2	coord: 4..136 e-value: 6.1E-93 score: 324.8
IPR004123	Dim1 family	PIRSF	PIRSF017199	Dim1	coord: 1..142 e-value: 3.9E-74 score: 244.8
IPR004123	Dim1 family	PFAM	PF02966	DIM1	coord: 4..136 e-value: 4.5E-65 score: 217.4
IPR004123	Dim1 family	PANTHER	PTHR12052	THIOREDOXIN-LIKE PROTEN 4A, 4B	coord: 1..142
None	No IPR available	GENE3D	3.40.30.10		coord: 1..141 e-value: 2.7E-72 score: 242.9
None	No IPR available	PANTHER	PTHR12052:SF9		coord: 1..142
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..137

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig96	contig	C-linearis_contig96:497046..498975 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig96.17048.1	mRNA_C-linearis_contig96.17048.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig96 497046..500083 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig96.17048.1 ID=prot_C-linearis_contig96.17048.1|Name=mRNA_C-linearis_contig96.17048.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=143bp
MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAE
DVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNN
KISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004123	Dim1
IPR036249	Thioredoxin-like_sf