prot_C-linearis_contig96.17045.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17045.1
Unique Nameprot_C-linearis_contig96.17045.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length561
Homology
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BLAST of mRNA_C-linearis_contig96.17045.1 vs. uniprot
Match: D7G4A8_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4A8_ECTSI)

HSP 1 Score: 570 bits (1469), Expect = 1.910e-196
Identity = 386/602 (64.12%), Postives = 424/602 (70.43%), Query Frame = 0 
Query:    1 MVHHKEMAQLLLESGALWASRLNVPWFLAGAGLGVPVAVGAVSTWDSKLLSLVTTLGGVIGGVAADRLSTTALDTLAGSD----------FSCYDVLTKGVGPACLALVVLSRNIRSEPTVAVKPAAFVALVSLLLEPLFSAHVLG--------------------TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAVSRARWLTGGAQLALWAAVVLAYANLSLRLSRAGGGSGRTVAGYMTALRSLAAKKRGTGGWVRIDRWGKGGGGWRGEGEEGGTAPNSPVPGGWGXXXXXXXXVRDNSRPRAHSLLGSLYETLMSGGGWRGGGRVDARAMALSQYQTMDDNGPPFERGEVTVRSIYCFGLDAAITGRPPSASLNNGGAXXXXXXXXXXXXXX----------IIAGGTSRPFYVTITLGGVTAKTSPRPGFSPSFTEVFPLGCDCPIRGAFLTVAVVDSFETGRSVRGDRIVGEVHLPLDAAQLVPGT-GTSSHGGEPSYVPSSGNDTGXXXXXXXXXXGAAYRLSGDWELQGALGGSLGGARVGADIVIHGPPSPSSAAGRLRRRR-ESVGWYAR 560
            M    EM QLLL SGA+WAS LN+PWFLAGAG+GVP AVG V+T +SKLLSL TTLGGV+GGVAADRLSTT  ++LAG+D          F+CYDVLTKGVGPACL LVVLSR+IRSEP+VAVKPAA VAL +LLLEPLFSA+VLG                    T +                    XXXXXXXXXXXXXXXXXXXXXXXXX   V+RARWLT GAQL LWAAVVLAYAN+SLRLSR  G  G+TV GYM+ALRSLAAKKRGTGGWVRID+WG G                        XXXXXXXX       RA+ LLGSLYETLM        GR+   AMAL Q+Q   D GPPFERGEVTVRSIYC GLDA+ITGRPPS   + GG     XXXXXXXXXX          +IAGG+SRPFYVT++LGG+TAKTS R GFSP+FTEVFPLGCDCPIRGA+LT+AVVDSFETGRS RGDR+VGEVHLPL+AAQLVPGT G   +    S   SSG   G          G AYRL GDWELQGALGG L GARVGADI++HGPPSPSSAAGRLRRRR ESVGWYAR
Sbjct:    1 MAQDHEMLQLLLRSGAMWASSLNIPWFLAGAGVGVPAAVGTVTTGNSKLLSLATTLGGVLGGVAADRLSTTISESLAGNDVGXXXXXGCEFTCYDVLTKGVGPACLLLVVLSRSIRSEPSVAVKPAAAVALAALLLEPLFSAYVLGXXXXXXXXXXXXXXXXXXXXTRSGLARLLLLRDVPHRVLGQVGXXXXXXXXXXXXXXXXXXXXXXXXXXXLVARARWLTAGAQLVLWAAVVLAYANVSLRLSR--GPPGKTVGGYMSALRSLAAKKRGTGGWVRIDQWGTGX---------------------XXXXXXXXXXXXXXXXARANGLLGSLYETLMGXXXXXXXGRICPEAMALCQHQKSYD-GPPFERGEVTVRSIYCSGLDASITGRPPSNGNSVGGVGVGGXXXXXXXXXXXXXXXXXXGGLIAGGSSRPFYVTVSLGGLTAKTSARQGFSPTFTEVFPLGCDCPIRGAYLTIAVVDSFETGRSGRGDRVVGEVHLPLEAAQLVPGTSGLDDNADMFSSSSSSGGWDGGS--------GPAYRLRGDWELQGALGGPLCGARVGADIMVHGPPSPSSAAGRLRRRRRESVGWYAR 570
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4A8_ECTSI1.910e-19664.12C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:473980..478075 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17045.1mRNA_C-linearis_contig96.17045.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 473803..478802 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17045.1 ID=prot_C-linearis_contig96.17045.1|Name=mRNA_C-linearis_contig96.17045.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=561bp
MVHHKEMAQLLLESGALWASRLNVPWFLAGAGLGVPVAVGAVSTWDSKLL
SLVTTLGGVIGGVAADRLSTTALDTLAGSDFSCYDVLTKGVGPACLALVV
LSRNIRSEPTVAVKPAAFVALVSLLLEPLFSAHVLGTTATTAAAAAAATT
RNGAAGVLLRRALSKVTGGRRRGTAAAGAAAAAAKAAVSRARWLTGGAQL
ALWAAVVLAYANLSLRLSRAGGGSGRTVAGYMTALRSLAAKKRGTGGWVR
IDRWGKGGGGWRGEGEEGGTAPNSPVPGGWGGGWGGGWGVRDNSRPRAHS
LLGSLYETLMSGGGWRGGGRVDARAMALSQYQTMDDNGPPFERGEVTVRS
IYCFGLDAAITGRPPSASLNNGGAGAGADHDAAGGGGGIIAGGTSRPFYV
TITLGGVTAKTSPRPGFSPSFTEVFPLGCDCPIRGAFLTVAVVDSFETGR
SVRGDRIVGEVHLPLDAAQLVPGTGTSSHGGEPSYVPSSGNDTGGGGGGG
GGGSGAAYRLSGDWELQGALGGSLGGARVGADIVIHGPPSPSSAAGRLRR
RRESVGWYAR*
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