prot_C-linearis_contig96.17038.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17038.1
Unique Nameprot_C-linearis_contig96.17038.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length66
Homology
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Match: D7G487_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G487_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 7.570e-33
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 0
Query:    1 MSSRKTRLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVVGSSIFQILKAAQGSK 65
            MSSRKTRLASEKHLQNVTRRGSVPKGKIENKKT YAVGPCLLFFFLFVV+GSS+FQ+LKAA  +K
Sbjct:    1 MSSRKTRLASEKHLQNVTRRGSVPKGKIENKKTGYAVGPCLLFFFLFVVLGSSLFQVLKAAGATK 65          
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Match: D0MTV7_PHYIT (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=D0MTV7_PHYIT)

HSP 1 Score: 64.7 bits (156), Expect = 2.030e-12
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    5 KTRLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVVGSSIFQILKAAQ 62
            K RL SEKHL N+T+RG V + + E+K   Y+VGP L+ FFLFV+VGSS+ QIL+ AQ
Sbjct:    6 KMRLRSEKHLANITKRGQVSQPQKEDK--GYSVGPILMGFFLFVLVGSSVIQILRTAQ 61          
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Match: K3WKY6_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WKY6_GLOUD)

HSP 1 Score: 64.7 bits (156), Expect = 2.030e-12
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    5 KTRLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVVGSSIFQILKAAQ 62
            K RL SEKHL N+T+RG V   K E  ++ Y VGP LL FF+FV+VGSS+ QIL+ AQ
Sbjct:    6 KMRLRSEKHLANITKRGMV--SKPEKNESGYGVGPVLLGFFVFVLVGSSVIQILRTAQ 61          
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Match: A0A4D9DDX7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDX7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.190e-12
Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    3 SRKTRLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVVGSSIFQILKAAQ 62
            SR TRL SEK  +NVT+RG+VP GK   ++ +  V P LL FF+FVVVGS+ FQI++ AQ
Sbjct:    4 SRATRLRSEKFDKNVTKRGNVPVGKAAKREEAPPVSPVLLGFFVFVVVGSAFFQIIRTAQ 63          
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Match: A0A2D4BJU9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJU9_PYTIN)

HSP 1 Score: 62.8 bits (151), Expect = 1.020e-11
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    7 RLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVVGSSIFQILKAAQ 62
            RL SEKHL N+T+RG V   + + K++ Y VGP LL FF+FV+VGSS+ QIL+ AQ
Sbjct:    2 RLRSEKHLANITKRGLV--SQPDKKESGYTVGPVLLGFFIFVLVGSSVIQILRTAQ 55          
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Match: A0A3M6VCY0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCY0_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.360e-11
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    5 KTRLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVVGSSIFQILKAAQ 62
            K RL SEKHL N+T+RG V + + E K   Y+VGP LL FF+FV+VGSSI QIL+ A 
Sbjct:    6 KIRLRSEKHLANITKRGLVSQPEKEEK--GYSVGPLLLGFFVFVLVGSSIIQILRTAN 61          
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Match: C5KPS5_PERM5 (Stress associated endoplasmic reticulum protein, putative (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KPS5_PERM5)

HSP 1 Score: 61.2 bits (147), Expect = 4.770e-11
Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    4 RKTRLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVVGSSIFQILKAAQ 62
            RKT L SE+  QN+ RRG   +GK   KK  Y VGP +L  FLFVVVGS++FQI+ AAQ
Sbjct:    4 RKTALRSEQFEQNINRRGKASQGK---KKDKYPVGPWVLGLFLFVVVGSAVFQIIAAAQ 59          
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Match: A0A0N7L5X2_PLAHL (Stress-associated endoplasmic reticulum protein 2-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5X2_PLAHL)

HSP 1 Score: 61.2 bits (147), Expect = 4.770e-11
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    7 RLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVVGSSIFQILKAAQ 62
            RL SEKHL N+T+RG V + K E+K   Y+VGP L  FF+FV+VGS++ QIL++AQ
Sbjct:    8 RLRSEKHLANITKRGQVSQPKKEDK--GYSVGPILFGFFVFVLVGSALVQILQSAQ 61          
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Match: F0X1E0_9STRA (Uncharacterized protein AlNc14C604G12231 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X1E0_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 4.770e-11
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    5 KTRLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVVGSSIFQILKAAQGS 64
            K RL SEKHL NV +RG+V   +    + ++ +GP LL FF+FV+VGSSI QIL+AAQ +
Sbjct:    6 KARLRSEKHLANVKKRGNV--SQANKGERTFPIGPVLLGFFIFVIVGSSIMQILRAAQSA 63          
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Match: T2M9E3_HYDVU (Stress-associated endoplasmic reticulum protein 2 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2M9E3_HYDVU)

HSP 1 Score: 60.8 bits (146), Expect = 6.950e-11
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    7 RLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVVGSSIFQILKAAQ 62
            R+A+EKH QNVT RG+VPK  +  K   YAVGP LL  FLFVV GS++FQI+++ +
Sbjct:    8 RVANEKHSQNVTMRGNVPK-TMNPKDEKYAVGPYLLGLFLFVVCGSAVFQIIQSIR 62          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G487_ECTSI7.570e-3389.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D0MTV7_PHYIT2.030e-1258.62Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
K3WKY6_GLOUD2.030e-1258.62Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A4D9DDX7_9STRA3.190e-1256.67Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2D4BJU9_PYTIN1.020e-1157.14Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A3M6VCY0_9STRA3.360e-1158.62Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
C5KPS5_PERM54.770e-1157.63Stress associated endoplasmic reticulum protein, p... [more]
A0A0N7L5X2_PLAHL4.770e-1157.14Stress-associated endoplasmic reticulum protein 2-... [more]
F0X1E0_9STRA4.770e-1153.33Uncharacterized protein AlNc14C604G12231 n=1 Tax=A... [more]
T2M9E3_HYDVU6.950e-1157.14Stress-associated endoplasmic reticulum protein 2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010580Stress-associated endoplasmic reticulum proteinPFAMPF06624RAMP4coord: 2..60
e-value: 3.1E-22
score: 78.4
IPR010580Stress-associated endoplasmic reticulum proteinPANTHERPTHR15601STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4coord: 2..62
NoneNo IPR availablePANTHERPTHR15601:SF0GEO09675P1coord: 2..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..65
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:316778..319256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17038.1mRNA_C-linearis_contig96.17038.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 316712..320743 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17038.1 ID=prot_C-linearis_contig96.17038.1|Name=mRNA_C-linearis_contig96.17038.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=66bp
MSSRKTRLASEKHLQNVTRRGSVPKGKIENKKTSYAVGPCLLFFFLFVVV
GSSIFQILKAAQGSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010580ER_stress-assoc