prot_C-linearis_contig96.17023.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17023.1
Unique Nameprot_C-linearis_contig96.17023.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length87
Homology
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BLAST of mRNA_C-linearis_contig96.17023.1 vs. uniprot
Match: A0A6H5JXZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ5_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 5.590e-39
Identity = 59/87 (67.82%), Postives = 74/87 (85.06%), Query Frame = 0 
Query:    1 MAGNPLWPCPSDICAVGFLKEVAKSNGGTFAPCDQKESKDDSTCQVSCTVLTVRNSDPALCELCLSAVGGTPSLGVTSGKKTSQGRD 87
            +AGNPLWPCPS +C  G LK V K+NGG F+PCDQK+S+D +TCQVSC++L+ R SDP +C+LCL++VGGTPSLGV SG+K SQGRD
Sbjct:   22 IAGNPLWPCPSIVCVPGLLKAVPKTNGGLFSPCDQKDSQDSTTCQVSCSILSARGSDPPICQLCLTSVGGTPSLGVLSGEKNSQGRD 108
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BLAST of mRNA_C-linearis_contig96.17023.1 vs. uniprot
Match: A0A6H5JLP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP4_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.360e-31
Identity = 55/86 (63.95%), Postives = 67/86 (77.91%), Query Frame = 0 
Query:    1 MAGNPLWPCPSDICAVGFLKEVAKSNGGTFAPCDQKESKDDSTCQVSCTVLTVRNSDPALCELCLSAVGGTPSLGVTSGKKTSQGR 86
            +AGNPLWPCPS+ C  G LK++ K+ GG F PCDQK+S D +TCQVSC+ L+ R  +P  CELCL+ VGGTPSLGV SG+KT QGR
Sbjct:   23 LAGNPLWPCPSNYCD-GLLKKIPKTKGGFFTPCDQKQSNDPNTCQVSCSFLSERGPNPVKCELCLTPVGGTPSLGVLSGEKTDQGR 107
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXZ5_9PHAE5.590e-3967.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLP4_9PHAE1.360e-3163.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:111540..111800 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17023.1mRNA_C-linearis_contig96.17023.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 111522..111800 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17023.1 ID=prot_C-linearis_contig96.17023.1|Name=mRNA_C-linearis_contig96.17023.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=87bp
MAGNPLWPCPSDICAVGFLKEVAKSNGGTFAPCDQKESKDDSTCQVSCTV
LTVRNSDPALCELCLSAVGGTPSLGVTSGKKTSQGRD
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