prot_C-linearis_contig96.17018.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17018.1
Unique Nameprot_C-linearis_contig96.17018.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length603
Homology
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BLAST of mRNA_C-linearis_contig96.17018.1 vs. uniprot
Match: A0A6H5JPW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW3_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.570e-24
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 0 
Query:    1 RHDLEGLWIIYQAKLVDPLDLDRWVEIFETTVSNLLSTQPLQSLTKRARLGVVMSIVGSGRTHLHTPAVLAVLATDWSDEWASFKLLQ 88
            R +LE L+ ++QAKL+ PLD  RW  +  TTV++LLS QPLQ LTK  RL V+M IVGSGR  L +PAVLAVLA DW D++ SFKLLQ
Sbjct:   74 RQELEELFTVWQAKLLHPLDRSRWTNVLNTTVASLLSAQPLQCLTKSGRLAVMMCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQ 161
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JPW3_9PHAE1.570e-2461.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 305..359
e-value: 4.0E-5
score: 25.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:73463..77133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17018.1mRNA_C-linearis_contig96.17018.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 73463..77133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17018.1 ID=prot_C-linearis_contig96.17018.1|Name=mRNA_C-linearis_contig96.17018.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=603bp
RHDLEGLWIIYQAKLVDPLDLDRWVEIFETTVSNLLSTQPLQSLTKRARL
GVVMSIVGSGRTHLHTPAVLAVLATDWSDEWASFKLLQDTVRQASLSRLR
SKWDFNSSSEFDVPRKCMADLVFLGAKKTVASWRALGIGGSARDAVEKAG
RELRGLAARCRGASDRPAARKILTCYLASHRKGTLALFAKVVERFTQALI
AWGQQHLGASEPTIFDQAFPFLGLRQIQASRSRADARRVPVETQDPAYTK
RPPSPALCGPFFDAMGEADTQAETSRWEEGEGKEAGKSEGSRKRRKIGTL
LRLDESVIQKGAYGDPDLWRRGAIETCRGDGTYDVRYDDDGEVGHLVRRQ
DIFGPEESDVPTGMLTPHDTTSARCSPLKRLQTISWASADDVSSLLPCSP
DDLWCVTDVDDDSSGGGNYTRLIQRGKRKRRVLHDDECEEDDDDSTTGAS
DAATAARDSQGRQASLSKFSNDDGEISQSPLLCIDQARSKGAVGIRAGQE
RTANKKALGKQGGSCDGFRPGKTESDIAYRGELAHYDVGGGTEGVDGEDD
ETDEEVEASTWDTRGDRRQSQEEDSEADADGVGKDADNRADDGIRSSPPP
ANE
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