mRNA_C-linearis_contig96.17018.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig96.17018.1 vs. uniprot
Match: A0A6H5JPW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW3_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.570e-24 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 1 RHDLEGLWIIYQAKLVDPLDLDRWVEIFETTVSNLLSTQPLQSLTKRARLGVVMSIVGSGRTHLHTPAVLAVLATDWSDEWASFKLLQ 264
R +LE L+ ++QAKL+ PLD RW + TTV++LLS QPLQ LTK RL V+M IVGSGR L +PAVLAVLA DW D++ SFKLLQ
Sbjct: 74 RQELEELFTVWQAKLLHPLDRSRWTNVLNTTVASLLSAQPLQCLTKSGRLAVMMCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQ 161 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17018.1 >prot_C-linearis_contig96.17018.1 ID=prot_C-linearis_contig96.17018.1|Name=mRNA_C-linearis_contig96.17018.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=603bp RHDLEGLWIIYQAKLVDPLDLDRWVEIFETTVSNLLSTQPLQSLTKRARLback to top mRNA from alignment at C-linearis_contig96:73463..77133- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig96.17018.1 ID=mRNA_C-linearis_contig96.17018.1|Name=mRNA_C-linearis_contig96.17018.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3671bp|location=Sequence derived from alignment at C-linearis_contig96:73463..77133- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig96:73463..77133- >mRNA_C-linearis_contig96.17018.1 ID=mRNA_C-linearis_contig96.17018.1|Name=mRNA_C-linearis_contig96.17018.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3618bp|location=Sequence derived from alignment at C-linearis_contig96:73463..77133- (Chordaria linearis ClinC8C monoicous)back to top |