prot_C-linearis_contig96.17018.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig96.17018.1
Unique Name	prot_C-linearis_contig96.17018.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	603

Homology

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BLAST of mRNA_C-linearis_contig96.17018.1 vs. uniprot
Match: A0A6H5JPW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW3_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.570e-24
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 0

Query:    1 RHDLEGLWIIYQAKLVDPLDLDRWVEIFETTVSNLLSTQPLQSLTKRARLGVVMSIVGSGRTHLHTPAVLAVLATDWSDEWASFKLLQ 88
            R +LE L+ ++QAKL+ PLD  RW  +  TTV++LLS QPLQ LTK  RL V+M IVGSGR  L +PAVLAVLA DW D++ SFKLLQ
Sbjct:   74 RQELEELFTVWQAKLLHPLDRSRWTNVLNTTVASLLSAQPLQCLTKSGRLAVMMCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQ 161

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig96.17018.1 vs. uniprot

BLAST of mRNA_C-linearis_contig96.17018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1

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x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A6H5JPW3_9PHAE	1.570e-24	61.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.30.30.140		coord: 305..359 e-value: 4.0E-5 score: 25.3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig96	contig	C-linearis_contig96:73463..77133 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig96.17018.1	mRNA_C-linearis_contig96.17018.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig96 73463..77133 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig96.17018.1 ID=prot_C-linearis_contig96.17018.1|Name=mRNA_C-linearis_contig96.17018.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=603bp
RHDLEGLWIIYQAKLVDPLDLDRWVEIFETTVSNLLSTQPLQSLTKRARL
GVVMSIVGSGRTHLHTPAVLAVLATDWSDEWASFKLLQDTVRQASLSRLR
SKWDFNSSSEFDVPRKCMADLVFLGAKKTVASWRALGIGGSARDAVEKAG
RELRGLAARCRGASDRPAARKILTCYLASHRKGTLALFAKVVERFTQALI
AWGQQHLGASEPTIFDQAFPFLGLRQIQASRSRADARRVPVETQDPAYTK
RPPSPALCGPFFDAMGEADTQAETSRWEEGEGKEAGKSEGSRKRRKIGTL
LRLDESVIQKGAYGDPDLWRRGAIETCRGDGTYDVRYDDDGEVGHLVRRQ
DIFGPEESDVPTGMLTPHDTTSARCSPLKRLQTISWASADDVSSLLPCSP
DDLWCVTDVDDDSSGGGNYTRLIQRGKRKRRVLHDDECEEDDDDSTTGAS
DAATAARDSQGRQASLSKFSNDDGEISQSPLLCIDQARSKGAVGIRAGQE
RTANKKALGKQGGSCDGFRPGKTESDIAYRGELAHYDVGGGTEGVDGEDD
ETDEEVEASTWDTRGDRRQSQEEDSEADADGVGKDADNRADDGIRSSPPP
ANE