mRNA_C-linearis_contig96.17015.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig96.17015.1
Unique NamemRNA_C-linearis_contig96.17015.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Match: D7G473_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G473_ECTSI)

HSP 1 Score: 479 bits (1232), Expect = 3.480e-169
Identity = 241/246 (97.97%), Postives = 244/246 (99.19%), Query Frame = 1 
Query:   82 AKVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKK-KSKD 816
            AKVVVEPHRHEGVFIARGKEDALCTLNS+PGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGP+GCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVV+ALYRP KK KSKD
Sbjct:    5 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 250
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BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Match: A0A835Z838_9STRA (Fibrillarin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z838_9STRA)

HSP 1 Score: 432 bits (1111), Expect = 8.290e-151
Identity = 213/243 (87.65%), Postives = 227/243 (93.42%), Query Frame = 1 
Query:   82 AKVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKKKS 810
            AKVVVEPHRHEGVFIAR KEDALCTLNS PGKAVYGEKLISV+ PP+ DG T+KIEYRVWNPFRSK+AAAILGG + I + PG+KVLYLGAAAGT+VSHV+DIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGHCVIS+KASCVDSTA+PEAVFAQEVSKL++E FKP EQ+TLEPYERDHAVVVA YR AKK  
Sbjct:    5 AKVVVEPHRHEGVFIARSKEDALCTLNSTPGKAVYGEKLISVDGPPTADGATTKIEYRVWNPFRSKIAAAILGGTENIWMAPGSKVLYLGAAAGTSVSHVSDIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDCVFADVAQPDQARIVALNSHYFLKNGGHCVISVKASCVDSTAAPEAVFAQEVSKLRSEGFKPLEQLTLEPYERDHAVVVAEYRAAKKSK 247
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BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Match: B8CBC2_THAPS (Uncharacterized protein n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8CBC2_THAPS)

HSP 1 Score: 414 bits (1065), Expect = 6.330e-143
Identity = 201/245 (82.04%), Postives = 224/245 (91.43%), Query Frame = 1 
Query:   82 AKVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKKKSKD 816
            +KVV+EPHRHEGVFIARGKEDAL TLNS PG AVYGEK ISVE PP  DG T+K+EYRVWNPFRSK+AAAILGGVD I I PG+KVLYLGAAAGT+VSHV+DIVGP G VYAVEF+HRPGRDL+N+AK+RTNVIPIIEDARHPLKYRMLVGMVD VFAD+AQPDQARIVALNSHYFLKNGGH VI+IKASC+DSTA+PEAVF +EVSKL++ENFKP EQ+TLEPYERDH V++A YRP+KKK  D
Sbjct:   59 SKVVIEPHRHEGVFIARGKEDALVTLNSTPGVAVYGEKRISVETPPGPDGNTTKVEYRVWNPFRSKIAAAILGGVDNIWIKPGSKVLYLGAAAGTSVSHVSDIVGPKGAVYAVEFSHRPGRDLLNVAKARTNVIPIIEDARHPLKYRMLVGMVDCVFADIAQPDQARIVALNSHYFLKNGGHSVIAIKASCIDSTAAPEAVFRREVSKLQSENFKPLEQLTLEPYERDHCVLIAQYRPSKKKKSD 303
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BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Match: A0A6S9GIT5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GIT5_HETAK)

HSP 1 Score: 412 bits (1058), Expect = 1.040e-142
Identity = 202/243 (83.13%), Postives = 219/243 (90.12%), Query Frame = 1 
Query:   82 AKVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKKKS 810
            AKV++EPHRHEGVFIARGKEDAL TLNS PGK VYGEK + V+ PP  DG T+K+EYRVWNPFRSKLAAAILGGVD I + PG+KV+YLGAAAGTTVSHV+DIVGP G VYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGH V+SIKASC+DSTAS EAVFA+EV KL+ E F+P+EQ+TLEPYERDHAVVVA YR  KKK 
Sbjct:    5 AKVIIEPHRHEGVFIARGKEDALVTLNSTPGKDVYGEKRVQVDGPPGPDGNTTKLEYRVWNPFRSKLAAAILGGVDNIWMKPGSKVMYLGAAAGTTVSHVSDIVGPTGAVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDCVFADVAQPDQARIVALNSHYFLKNGGHAVVSIKASCIDSTASAEAVFAREVKKLQDEQFRPQEQLTLEPYERDHAVVVATYRQPKKKK 247
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BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Match: A0A7S2UWV2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWV2_9STRA)

HSP 1 Score: 412 bits (1060), Expect = 1.210e-142
Identity = 204/243 (83.95%), Postives = 217/243 (89.30%), Query Frame = 1 
Query:   85 KVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKKKSK 813
            KVV+EPHRHEGVFIAR KEDAL TLNS PGK VYGEK I V+ PP  DG T+KIEYRVWNPFRSKLAAA+LGGVD I + PGAKVLYLGAAAGTTVSHV+DIVGP G VYAVEFAHRPGRDLINMAK+RTNVIPIIEDARHPLKYRMLV MVDT+FADVAQPDQARIVALN+HYFLKNGGH VISIKASC+DSTA PEAVFA+EV KL+TE FKP EQ+TLEPYERDHAVVV  YRP KK  K
Sbjct:   28 KVVIEPHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVDGPPGPDGNTTKIEYRVWNPFRSKLAAAVLGGVDNIWMAPGAKVLYLGAAAGTTVSHVSDIVGPQGAVYAVEFAHRPGRDLINMAKARTNVIPIIEDARHPLKYRMLVPMVDTIFADVAQPDQARIVALNAHYFLKNGGHFVISIKASCIDSTAPPEAVFAREVKKLQTEQFKPAEQLTLEPYERDHAVVVGAYRPPKKAKK 270
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BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Match: A0A7S0CDH6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDH6_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 4.360e-142
Identity = 201/244 (82.38%), Postives = 221/244 (90.57%), Query Frame = 1 
Query:   82 AKVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKKKSK 813
            AKV+VEPHRHEG+F+ARGKEDAL TLNS PG AVYGEK ISV+ PP  DG  +K+EYRVWNPFRSKLAAA+LGGVD I I PG KVLYLGAAAGT+VSHV+DIVGP G VYAVEF+HRPGRDLINMAKSRTNVIPIIEDARHPLKYRML+GMVDTVFADVAQPDQARIVALNS YFLKN GHCVIS+KASC+DSTA+PEAVF +EVSKL+ ENF+P EQ+TLEPYERDHAVV+A +RP KKK K
Sbjct:   82 AKVIVEPHRHEGIFVARGKEDALVTLNSTPGAAVYGEKRISVDGPPGADGNATKVEYRVWNPFRSKLAAAVLGGVDNIWIKPGYKVLYLGAAAGTSVSHVSDIVGPTGSVYAVEFSHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLIGMVDTVFADVAQPDQARIVALNSSYFLKNKGHCVISVKASCIDSTAAPEAVFRREVSKLQAENFRPLEQLTLEPYERDHAVVIAQFRPDKKKKK 325
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BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Match: A0A8J2T0A1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0A1_9STRA)

HSP 1 Score: 408 bits (1048), Expect = 1.770e-140
Identity = 202/241 (83.82%), Postives = 218/241 (90.46%), Query Frame = 1 
Query:   82 AKVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKK 804
            AKVVVEPHRHEGVFIARGKED + TLNS PGK VYGEK ISV+ P +EDGTT+KIEYRVWNPFRSKL AAILGGVD IH+ PG+KVLYLG AAGTTVSHV+D+VGP GCVYAVEF+HRPGRDLINMAK RTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNS YFLK GG  V+SIKASC+DSTA+PEAVFA EV+KL+ + FKPKEQ+TLEPYERDHAVVV LYRP KK
Sbjct:   55 AKVVVEPHRHEGVFIARGKEDVIVTLNSTPGKDVYGEKRISVDGPANEDGTTTKIEYRVWNPFRSKLCAAILGGVDTIHMKPGSKVLYLGGAAGTTVSHVSDLVGPQGCVYAVEFSHRPGRDLINMAKHRTNVIPIIEDARHPLKYRMLVGMVDCVFADVAQPDQARIVALNSQYFLKAGGGFVVSIKASCIDSTATPEAVFAAEVAKLQKDQFKPKEQLTLEPYERDHAVVVGLYRPPKK 295
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BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Match: A0A7S2KUE1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KUE1_9STRA)

HSP 1 Score: 409 bits (1051), Expect = 1.910e-140
Identity = 201/243 (82.72%), Postives = 220/243 (90.53%), Query Frame = 1 
Query:   82 AKVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKKKS 810
            AKVV+EPHRHEGVFIARGKEDAL TLNS PG AVYGEK ISVE+PP  DG + K+EYRVWNPFRSK+AAAILGGVD I I PG+KVLYLGAAAGT+VSHV+DIVGP G VYAVEF+HRPGRDL+N+AK RTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGH VISIKASC+DSTA+PEAVF +EVSKL +ENFKP EQ+TLEPYERDH V+++ YRP KKK 
Sbjct:   82 AKVVIEPHRHEGVFIARGKEDALVTLNSTPGVAVYGEKRISVESPPGPDGNSVKVEYRVWNPFRSKIAAAILGGVDNIWIKPGSKVLYLGAAAGTSVSHVSDIVGPKGNVYAVEFSHRPGRDLLNVAKGRTNVIPIIEDARHPLKYRMLVGMVDVVFADVAQPDQARIVALNSHYFLKNGGHSVISIKASCIDSTAAPEAVFRREVSKLTSENFKPLEQLTLEPYERDHCVLISQYRPTKKKK 324
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BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Match: I2CQX8_NANGC (rRNA 2'-O-methyltransferase fibrillarin (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CQX8_NANGC)

HSP 1 Score: 406 bits (1043), Expect = 2.210e-140
Identity = 199/244 (81.56%), Postives = 217/244 (88.93%), Query Frame = 1 
Query:   82 AKVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKKKSK 813
            AKV++E HRHEGVFIAR KEDAL TLNS PGK VYGEK I VE PP  +G  +K+EYRVWNPFRSKLAAAILGGVD I + PG+KVLYLGAA+GTTVSHV+DIVGP GCVYAVEF+HRPGRDLINMAK RTNVIPI+EDARHPLKYRMLVGMVDT+FADVAQPDQARIV+LNSHYFLKNGGH VISIKASC+DSTA+PEAVF +EV KL+ E FKP EQ+TLEPYERDHAVVVA YRPA K  K
Sbjct:    9 AKVIIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMKPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVISIKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKTKK 252
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BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Match: A0A1Z5KF33_FISSO (rRNA 2'-O-methyltransferase fibrillarin n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KF33_FISSO)

HSP 1 Score: 407 bits (1046), Expect = 6.960e-140
Identity = 200/243 (82.30%), Postives = 221/243 (90.95%), Query Frame = 1 
Query:   82 AKVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPPSEDGTTS-KIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKKK 807
            AKV+VEPHRHEGVF+ARGKEDAL TLNS PG AVYGEK ISVE PP +  T + K+EYRVWNPFRSKLAAA+LGGVD I I PG+KVLY+GAAAGT+VSHV+DIVGP G VYAVEF+HRPGRDL++MAK RTNVIPIIEDARHPLKYRML+GMVDTVFADVAQPDQARIVALNSHYFLKNGGH VI++KASC+DSTASPEAVFA+EV KL+ ENFKP EQ+TLEPYERDHAVV+A YRP KKK
Sbjct:   72 AKVIVEPHRHEGVFVARGKEDALVTLNSTPGIAVYGEKRISVEVPPKDGETVAQKVEYRVWNPFRSKLAAAVLGGVDNIWIAPGSKVLYIGAAAGTSVSHVSDIVGPQGAVYAVEFSHRPGRDLLSMAKQRTNVIPIIEDARHPLKYRMLIGMVDTVFADVAQPDQARIVALNSHYFLKNGGHAVIAVKASCIDSTASPEAVFAREVQKLQAENFKPLEQLTLEPYERDHAVVIAEYRPNKKK 314
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17015.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G473_ECTSI3.480e-16997.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z838_9STRA8.290e-15187.65Fibrillarin n=1 Tax=Tribonema minus TaxID=303371 R... [more]
B8CBC2_THAPS6.330e-14382.04Uncharacterized protein n=2 Tax=Thalassiosirales T... [more]
A0A6S9GIT5_HETAK1.040e-14283.13Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2UWV2_9STRA1.210e-14283.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0CDH6_9STRA4.360e-14282.38Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A8J2T0A1_9STRA1.770e-14083.82Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2KUE1_9STRA1.910e-14082.72Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
I2CQX8_NANGC2.210e-14081.56rRNA 2'-O-methyltransferase fibrillarin (Fragment)... [more]
A0A1Z5KF33_FISSO6.960e-14082.30rRNA 2'-O-methyltransferase fibrillarin n=2 Tax=Fi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:60630..63655 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score487.3
Seed ortholog evalue4.4e-135
Seed eggNOG ortholog2880.D7G473
KEGG koko:K14563
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000494,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005732,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008213,GO:0008276,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0015030,GO:0016043,GO:0016070,GO:0016072,GO:0016074,GO:0016569,GO:0016570,GO:0016571,GO:0016604,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0022613,GO:0030684,GO:0031123,GO:0031126,GO:0031167,GO:0031428,GO:0031974,GO:0031981,GO:0032040,GO:0032259,GO:0032991,GO:0033967,GO:0034470,GO:0034641,GO:0034660,GO:0034963,GO:0036009,GO:0036211,GO:0042054,GO:0042254,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0046483,GO:0051276,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140096,GO:0140098,GO:0140102,GO:1901360,GO:1901363,GO:1901564,GO:1990258,GO:1990259,GO:1990904
EggNOG free text desc.ubiE/COQ5 methyltransferase family
EggNOG OGsCOG1889@1,KOG1596@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-02_001530.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Exons5
Model size984
Cds size753
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930819.8184052-UTR-C-linearis_contig96:60629..607911622930819.8184052-UTR-C-linearis_contig96:60629..60791Chordaria linearis ClinC8C monoicousUTRC-linearis_contig96 60630..60791 -
1690881266.3562825-UTR-C-linearis_contig96:60629..607911690881266.3562825-UTR-C-linearis_contig96:60629..60791Chordaria linearis ClinC8C monoicousUTRC-linearis_contig96 60630..60791 -
1622930819.9115143-UTR-C-linearis_contig96:63586..636551622930819.9115143-UTR-C-linearis_contig96:63586..63655Chordaria linearis ClinC8C monoicousUTRC-linearis_contig96 63587..63655 -
1690881266.420726-UTR-C-linearis_contig96:63586..636551690881266.420726-UTR-C-linearis_contig96:63586..63655Chordaria linearis ClinC8C monoicousUTRC-linearis_contig96 63587..63655 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930819.837228-CDS-C-linearis_contig96:60791..609171622930819.837228-CDS-C-linearis_contig96:60791..60917Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 60792..60917 -
1690881266.3687851-CDS-C-linearis_contig96:60791..609171690881266.3687851-CDS-C-linearis_contig96:60791..60917Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 60792..60917 -
1622930819.8571248-CDS-C-linearis_contig96:61574..616941622930819.8571248-CDS-C-linearis_contig96:61574..61694Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 61575..61694 -
1690881266.3787394-CDS-C-linearis_contig96:61574..616941690881266.3787394-CDS-C-linearis_contig96:61574..61694Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 61575..61694 -
1622930819.8700798-CDS-C-linearis_contig96:61952..621921622930819.8700798-CDS-C-linearis_contig96:61952..62192Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 61953..62192 -
1690881266.3911812-CDS-C-linearis_contig96:61952..621921690881266.3911812-CDS-C-linearis_contig96:61952..62192Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 61953..62192 -
1622930819.8837779-CDS-C-linearis_contig96:62483..626421622930819.8837779-CDS-C-linearis_contig96:62483..62642Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 62484..62642 -
1690881266.400849-CDS-C-linearis_contig96:62483..626421690881266.400849-CDS-C-linearis_contig96:62483..62642Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 62484..62642 -
1622930819.8988698-CDS-C-linearis_contig96:63478..635861622930819.8988698-CDS-C-linearis_contig96:63478..63586Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 63479..63586 -
1690881266.4107995-CDS-C-linearis_contig96:63478..635861690881266.4107995-CDS-C-linearis_contig96:63478..63586Chordaria linearis ClinC8C monoicousCDSC-linearis_contig96 63479..63586 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17015.1prot_C-linearis_contig96.17015.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig96 60792..63586 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig96.17015.1

>prot_C-linearis_contig96.17015.1 ID=prot_C-linearis_contig96.17015.1|Name=mRNA_C-linearis_contig96.17015.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=251bp
MKGGAKVVVEPHRHEGVFIARGKEDALCTLNSAPGKAVYGEKLISVEAPP
SEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTT
VSHVADIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKY
RMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTA
SPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVVALYRPAKKKSKDT
*
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mRNA from alignment at C-linearis_contig96:60630..63655-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig96.17015.1 ID=mRNA_C-linearis_contig96.17015.1|Name=mRNA_C-linearis_contig96.17015.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3026bp|location=Sequence derived from alignment at C-linearis_contig96:60630..63655- (Chordaria linearis ClinC8C monoicous)
GGTGGAGGGCGTGGAGGGGGCCGGGGTGGGGGCCGGGGTGGAGGCCGCGG
CGGTGGTCGTGGAGGCGGGATGAAAGGAGGTGCCAAGGTTGTAGTGGAGC
CGCATAGGCACGAGGGCGTTTTCATCGCAAGAGGAAAGGAGGACGCGCTT
TGCACTCTCAACAGTGCTCCCGGCAAGGTCAGTTTGTAGCATTGTGTACC
CATCCACGGCACTACGGGCGTCCGTTTAGTACGCTCCCTGCCTGCCGTAG
AACTTGGGCTACATCCTCCGCTTCCCTTGTTCCTCTGAGTTGACGGCAAT
TTCAATACTGCTGTAGAGTTGAACTACTCTGAACCGCCAATTTCTCCGAA
CCACCCATGCGTAAGTTCGGGTAATCGAAAGATGCTTTTGACATGAGTCA
TGGTGCGATATGTGGTTACTTTGTTTCTTTAGCGGCACCCCGCTTGGCTC
AACGCCACGATGAAGTGGTTTATGTATGCACGCACAAGCTAGTGTTTGCA
GCCCGGCTTCGTCTTCACTGACTGAAACATTGGTGTCGGAAACACAGGGT
CAGATGGCATTTCATGGTCCTTCGTCTATTGTTCGACTTTACAGCATTAC
ACGAACCGGCACAGACACGGACACACGCTACCTGCGCACCCGAAGTCTAG
CTGTTATGGTCGCCATTCAAGGATCTTATGGACGGCAGGCCTCGAATGTC
CGAAGGACTGCTGTGTGTGTGTTTTACGCAAACCAGTGGCGTAGCCGACA
ATGGTGCTATAGCCCCTGATTTGCAAGCCTGATGGCGATGACCGATTGAT
GCCAACCATGGGCTAACCATGCTCGGTGGTATTTATGTATGCAATCCTCG
AGCGACCCGTTTCTCTGGAGTGCGTTGATCAAATCGTTCTGTTATTCTCA
GCCTTCTACAAACCAGCTGGGCTGGAATATGCACTTCCCACAAATCTACG
CCAATTCCGTCGTACATACGTACGTCCTGCTGACTCGCTCCTTCCCCTGG
CTGGAACACGCAGGCTGTGTACGGGGAGAAGCTGATATCGGTGGAGGCCC
CACCAAGCGAGGATGGCACAACGTCGAAGATCGAGTACCGCGTGTGGAAT
CCCTTCCGGTCCAAGCTTGCGGCTGCCATTCTCGGAGGAGTCGACGGTAT
CCACATTGTGCCGGGCGCGAAGGTGAAGACGTTGCGTTTTTTGAGAGTTT
CCTCTGTACAACAAAATTATTGGTAAACCATTGCTCGTATTTCCTAGTTA
TTGATGAGGTTGCCAACTGCCAAGCCCACGATCAGATCGATGCACTTCAG
ATTCCCCATCCCCAAGACATTGTGTTCGTGTCCCTCACATCTTGCAGCGA
GATGTCATGTGGTTATGCCACGGGGACGGCTACAGAGTTCGTACGCGTTG
CTCAAGTATAGCCGCCATGGACGAAGACCAATAGTTCCTCTCCAATAATT
CATGTTGCAACAGGTGCTCTACCTTGGTGCAGCTGCCGGTACGACCGTGT
CGCATGTTGCGGACATCGTAGGGCCTGCGGGGTGTGTGTACGCGGTGGAG
TTTGCTCACCGGCCCGGGCGAGACCTCATCAACATGGCCAAGTCGCGCAC
CAACGTGATCCCCATCATTGAGGATGCACGACACCCCCTAAAGTACCGGA
TGCTTGTGGGCATGGTGGACACCGTTTTCGCCGACGTTGCCCAGCCGGAT
CAGGTGCGATACATCTGCACTTGGTGTACCAATAGCAGGTGCAGCCATTA
GTTGTGACTGTCCGAGATAAGTCTTTGCCCTGCGTTGGAACGCCGGCGTA
GTTGGTGACGTGGACTCCTTCTGCGTATCGCATATGTTCATACGTCCGAA
CTAGTGGGTTGTTTGGTTTGACAAGATCACTAGGCATGGCACGAGAGCTC
CCAGCGCTAATTTCGCTTGCACGAAACGTTGTCGACCCGCGTGTTTTTGC
TTTCATTTTAGGCACGCATCGTGGCGCTGAACTCGCACTATTTCCTCAAA
AATGGAGGGCACTGCGTCATTTCGATCAAGGCGTCATGCGTCGACTCGAC
GGCATCACCGGAGGCTGTGTTCGCCCAGGAGGTACGATGAATCTTCGACT
TATACCCCGTCGACATTTTACTATTTTTCTCTTTTCGACTCTCGATGCTC
GCTTGACATTCGCAAGTGGTGCTCCCGGCTTGAAGATATCATGTAAGCTT
TTGTTATGAGCGCCTGTGTGTGTGTGTGTTTTCGTCCCATTTATTTTGGC
GACAGTCCCTTCCCGATCAAGGCGAGACGTGTACTGCACTTGTTCAGTGT
ATTTTTCTGTACAACTATAACCACTAGAACCAACCGGGGTCACACAGGAG
GGGGTAAACACTAGGGCTTTTTTCCTTTTTTTCTTTATCTTTTTTGCCCC
ACCTTCCTCCTGCGGTGCTTGCTTCGGATTTTATCGCGAGAAGGGTGCAG
CCATCCCATTCTCTCGTCAATGTGCTAAGTCGAAGTTTGGTACTCACGAG
CTTTTTCAGCTATGTTATCGCTTTCACCGGCAAAGTCGCAAAATAATCAC
CTTTGCTTGGAATTGAACTCCAGACTTTGCTGCTAGTGGGTTCGAGGTTA
AACCACTAGGCCACCGGGGCGACCGGCTGTGTGTAGTAACCACGAAATGC
TGGTGCGTTGAAACTGCATGAAGCTGCGCACGTGCTGTGTTGTTGCGTTG
AACCCGATGTCGTGACGTTGCGTCGTGCTTTCTCACAGGTTTCCAAGCTG
AAGACGGAAAACTTCAAGCCCAAGGAGCAAGTAACCCTAGAGCCCTACGA
GCGTGACCACGCAGTAGTTGTTGCGCTGTACCGCCCTGCGAAGAAGAAAT
CGAAAGACACATGAGATGCGGCGGATTGATATATACGTTAATATGCGGGT
TGAAAGATGTGAGTTGCACGATAGTAGAGCCGGTCGCCCCGGTGGCCTAG
TGGTTTAACCTCGAACCCACTAGCAGCAAAGTCTGGAGTTCAATTCCAAG
CAAAGGTGATTTTTTTGCGACTTTGC
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Coding sequence (CDS) from alignment at C-linearis_contig96:60630..63655-

>mRNA_C-linearis_contig96.17015.1 ID=mRNA_C-linearis_contig96.17015.1|Name=mRNA_C-linearis_contig96.17015.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1506bp|location=Sequence derived from alignment at C-linearis_contig96:60630..63655- (Chordaria linearis ClinC8C monoicous)
ATGAAAGGAGGTGCCAAGGTTGTAGTGGAGCCGCATAGGCACGAGGGCGT
TTTCATCGCAAGAGGAAAGGAGGACGCGCTTTGCACTCTCAACAGTGCTC
CCGGCAAGATGAAAGGAGGTGCCAAGGTTGTAGTGGAGCCGCATAGGCAC
GAGGGCGTTTTCATCGCAAGAGGAAAGGAGGACGCGCTTTGCACTCTCAA
CAGTGCTCCCGGCAAGGCTGTGTACGGGGAGAAGCTGATATCGGTGGAGG
CCCCACCAAGCGAGGATGGCACAACGTCGAAGATCGAGTACCGCGTGTGG
AATCCCTTCCGGTCCAAGCTTGCGGCTGCCATTCTCGGAGGAGTCGACGG
TATCCACATTGTGCCGGGCGCGAAGGCTGTGTACGGGGAGAAGCTGATAT
CGGTGGAGGCCCCACCAAGCGAGGATGGCACAACGTCGAAGATCGAGTAC
CGCGTGTGGAATCCCTTCCGGTCCAAGCTTGCGGCTGCCATTCTCGGAGG
AGTCGACGGTATCCACATTGTGCCGGGCGCGAAGGTGCTCTACCTTGGTG
CAGCTGCCGGTACGACCGTGTCGCATGTTGCGGACATCGTAGGGCCTGCG
GGGTGTGTGTACGCGGTGGAGTTTGCTCACCGGCCCGGGCGAGACCTCAT
CAACATGGCCAAGTCGCGCACCAACGTGATCCCCATCATTGAGGATGCAC
GACACCCCCTAAAGTACCGGATGCTTGTGGGCATGGTGGACACCGTTTTC
GCCGACGTTGCCCAGCCGGATCAGGTGCTCTACCTTGGTGCAGCTGCCGG
TACGACCGTGTCGCATGTTGCGGACATCGTAGGGCCTGCGGGGTGTGTGT
ACGCGGTGGAGTTTGCTCACCGGCCCGGGCGAGACCTCATCAACATGGCC
AAGTCGCGCACCAACGTGATCCCCATCATTGAGGATGCACGACACCCCCT
AAAGTACCGGATGCTTGTGGGCATGGTGGACACCGTTTTCGCCGACGTTG
CCCAGCCGGATCAGGCACGCATCGTGGCGCTGAACTCGCACTATTTCCTC
AAAAATGGAGGGCACTGCGTCATTTCGATCAAGGCGTCATGCGTCGACTC
GACGGCATCACCGGAGGCTGTGTTCGCCCAGGAGGCACGCATCGTGGCGC
TGAACTCGCACTATTTCCTCAAAAATGGAGGGCACTGCGTCATTTCGATC
AAGGCGTCATGCGTCGACTCGACGGCATCACCGGAGGCTGTGTTCGCCCA
GGAGGTTTCCAAGCTGAAGACGGAAAACTTCAAGCCCAAGGAGCAAGTAA
CCCTAGAGCCCTACGAGCGTGACCACGCAGTAGTTGTTGCGCTGTACCGC
CCTGCGAAGAAGAAATCGAAAGACACATGAGTTTCCAAGCTGAAGACGGA
AAACTTCAAGCCCAAGGAGCAAGTAACCCTAGAGCCCTACGAGCGTGACC
ACGCAGTAGTTGTTGCGCTGTACCGCCCTGCGAAGAAGAAATCGAAAGAC
ACATGA
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