prot_C-linearis_contig96.17010.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17010.1
Unique Nameprot_C-linearis_contig96.17010.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length323
Homology
BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 4.080e-43
Identity = 115/302 (38.08%), Postives = 160/302 (52.98%), Query Frame = 0
Query:    1 MPVWSEDELLECRRIIFPDARSVNDVRKAFEKVGGVARAVFRPRRFARQVGKMERATSQVNLGLLRQVCAVEQNEF--LSTDKTGDALFHMLPSPGTAYECFDVVFASEYALELVEKAVSEREYLDFQGHVMATLEHADLNSKVGGSARGQMFERLAHAALTRSVRLKNPTAFNMTILS---NSGKDVLGDGELSLNFTRIKEIGGEAFPRTSLRRGTYYRPTSQTFPAVDSFFVDRSTGTLYFFQMKSAGV-----EVIETGASLEKFWKTASKSKSIT---KCVLVCVVPSIN-WQKAVD 288
            MP W  DEL  CR+ +FP      DVR+ F KVGGVARAVF   +  +   KM+ A S ++L LL+Q+ +  +++   +STD++GDAL H+LP P T +E F V FASE+A  +    + ++E+      V A   H +L  KV    R   FE +AH  +  +        F+M ILS   +S K VL    L L+F + +   G +FP  +L  GTYYRP S  F A DSF VD  + TL+FFQ+KSAG+     E       +EK+W+ A          + V   VVP    W KA +
Sbjct:  206 MPPWCLDELFRCRQAVFPHVPET-DVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAE-RAAGFETIAHKTIGGA---SEQQWFDMRILSRASSSTKSVLEGNRLRLSFVKEQSFEGNSFP-DALVAGTYYRPGSPNFAAADSFGVDSGSKTLWFFQVKSAGLPPKEGEKAVKWTHVEKYWRRAKLHHGAPIKKRFVYAFVVPEGKVWNKATE 501          
BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: M4C004_HYAAE (RxLR effector candidate protein n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C004_HYAAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.810e-5
Identity = 69/249 (27.71%), Postives = 103/249 (41.37%), Query Frame = 0
Query:    1 MPVWSEDELLECRRIIFPDARSVNDVRKAFEKVGGVARAVFRPRRFARQVGKMERATSQVNLGLLRQVCAVEQNEFLSTDKT--GDALFHMLPSPGTAYECFDVVFASEYALELVEKAVSEREYLDFQGHVMATLEHADLNSKVGGSA--RGQMFERLAHAALTRSVRLKNPTAFNMTILSNSGKDVLGDGELSLN-FTRIKEIGGEAFPRTSLRRG-----------------TYYRPTSQTFPAVDS 227
            MPVW+E E+L+CR +++ D R +  V + + K GG+AR V R     RQ   +  A ++VNL  +     V  N  +S         + H+L       E +  VFAS + L +V   V    + + +G ++A L      SK+   A   G +FE   H+ L R         F +  L+   K     GE   +  TR+  I  E      LR                   TY RP S  F +VD+
Sbjct:  312 MPVWTEQEILQCRDLMYSD-RPLGRVMECYRKWGGIARYVLRFAMVERQQSLLGEAINEVNLEAI-----VNSNGQMSAKDIMISHRVLHILVEDDFNNEGY--VFASRHVLNMVYNKV----FAENRGRLLAFLSSC---SKIDSFAVVYGLLFETYVHSILPRG------GTFRVRRLTEGSKKKAAGGEKGESKITRV--ITDEDVEEVVLRERKATVFEGNIRVAADDPPTYLRPASGNFESVDA 537          
BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: W4FCC5_9STRA (Crinkler domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCC5_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 5.780e-5
Identity = 52/168 (30.95%), Postives = 73/168 (43.45%), Query Frame = 0
Query:    1 MPVWSEDELLECRRIIFPDARSVNDVRKAFEKVGGVARAVFRPRRFARQVGKMERATSQVNLGLLRQVCAVEQNEFLSTDKTGDALFHMLPSPGTAYECFD--VVFASEYALELVEKAVSEREYLDFQGHVMATLEHADLNSKVGGSARGQMFERLAHAALTRSVRLK 166
            MPVW+ DE+L CR++++PD   VN V   F + GGV R V            +ERA   VN       C    N     D   +A   +L          +  VVFAS Y  ++V + + + ++ D     +A  E  D      G  RG +FER  HA L R  R +
Sbjct:  309 MPVWTLDEILSCRKLLYPDL-DVNMVTDCFHRWGGVPRYVLENMLRDTHQSLLERALGMVN-------CDWVVNAIGELDAMFEASHRLLHYDVNEKTFINKHVVFASPYVQDVVYRRLCKDDH-DKLVKFLAASEGIDQL----GVVRGIVFERYVHAVLPRGGRFR 463          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KFB9_9PHAE4.080e-4338.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
M4C004_HYAAE1.810e-527.71RxLR effector candidate protein n=3 Tax=Hyaloperon... [more]
W4FCC5_9STRA5.780e-530.95Crinkler domain-containing protein n=3 Tax=Aphanom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33129FAMILY NOT NAMEDcoord: 1..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:5477..6445 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17010.1mRNA_C-linearis_contig96.17010.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 2312..34219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17010.1 ID=prot_C-linearis_contig96.17010.1|Name=mRNA_C-linearis_contig96.17010.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=323bp
MPVWSEDELLECRRIIFPDARSVNDVRKAFEKVGGVARAVFRPRRFARQV
GKMERATSQVNLGLLRQVCAVEQNEFLSTDKTGDALFHMLPSPGTAYECF
DVVFASEYALELVEKAVSEREYLDFQGHVMATLEHADLNSKVGGSARGQM
FERLAHAALTRSVRLKNPTAFNMTILSNSGKDVLGDGELSLNFTRIKEIG
GEAFPRTSLRRGTYYRPTSQTFPAVDSFFVDRSTGTLYFFQMKSAGVEVI
ETGASLEKFWKTASKSKSITKCVLVCVVPSINWQKAVDLAAGGDCLKGSN
GRFQIGVCCLRDTLKESLVWLK*
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