prot_C-linearis_contig95.16980.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig95.16980.1
Unique Nameprot_C-linearis_contig95.16980.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length211
Homology
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BLAST of mRNA_C-linearis_contig95.16980.1 vs. uniprot
Match: A0A6H5KRN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRN9_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 2.540e-29
Identity = 67/143 (46.85%), Postives = 87/143 (60.84%), Query Frame = 0 
Query:    1 EQRRVGVTIEQARPMLTPVPLPLIRYMRQSASRLGTAKARVERSRDIALFGTAFHTAQRGFDLSCALAAQVLSLPGGKGLIFNFHFGKTLRDSSLAIVARRDRACHELCPVRAVQVFAIVANSMGWQLREGYMFPKFEAGGSR 143
            EQ+RVGV + QA  ML  V + L+R MR  A    +   R+E +RD+ALF  AF   +RG DLS  + +QVL LP G+GLIFNF FGKTLRDS  A+V   D AC  +C V  V  +   A  +GW L +G++FP     G+R
Sbjct:  815 EQKRVGVAVNQAEAMLPHVLIDLLRDMRSRAQTASSLAERIELTRDVALFSLAFAPMRRGHDLSFTMGSQVLQLPAGQGLIFNFQFGKTLRDSVDAVVVSPDVACPSICAVSNVTGYISAAERIGWDLSQGHLFPVVLLDGTR 957
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KRN9_9PHAE2.540e-2946.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 23..211
e-value: 3.5E-10
score: 42.0
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 40..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:281038..281670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16980.1mRNA_C-linearis_contig95.16980.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig95 281038..281670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig95.16980.1 ID=prot_C-linearis_contig95.16980.1|Name=mRNA_C-linearis_contig95.16980.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=211bp
EQRRVGVTIEQARPMLTPVPLPLIRYMRQSASRLGTAKARVERSRDIALF
GTAFHTAQRGFDLSCALAAQVLSLPGGKGLIFNFHFGKTLRDSSLAIVAR
RDRACHELCPVRAVQVFAIVANSMGWQLREGYMFPKFEAGGSRSRSPWNP
KDMALALQSNVAAAGLEEGRKYSMHYFRIGGAVSQAFTGTAVDAPMGLVG
WKTRGVAQRYV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR011010DNA_brk_join_enz