mRNA_C-linearis_contig95.16974.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig95.16974.1
Unique NamemRNA_C-linearis_contig95.16974.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI)

HSP 1 Score: 936 bits (2419), Expect = 0.000e+0
Identity = 616/733 (84.04%), Postives = 630/733 (85.95%), Query Frame = 1 
Query:  373 LTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNS--APGSD-SIVAAMGAQTSXXXXXXXXXXXXXXXXXXXN-SWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGADGSYG 2559
            LTFMQHDFGLDRRL+KAVAKMGFVYPTLVQNKCIPLAL+GKDLLVRARTGSGKTAAFALPLLQKILRRK AEPGL RGVRAVVLVPTRELC+QAR HLSELMHYCRDQVS+LALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYS+DIRAVTK LPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGA+DG+L+QFYL L DK DKFLVVFAFIKLGLLEGKGLFFVN+TESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ    EFNRGIFDYLIVTD+SMDVQG GGV VE                                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      K    G++ EFGAARGVDFRGVSFVLNVDFPPT SSYTHRVGRTARGGASGTALSLVLAKDEKQ RTL +VQSSQPSLAAPSLDGG     APGS  SIV AMG Q     XXXXXXXXXXXXXXXX  SWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDL+VLRHDKSVLHPLRKLDHLKHIPDYLMP GLQTGEDPTQRQRKRIKRARGGAKRRQGQG DQ RRKDNDPLQTFEASELGADGSYG
Sbjct:   45 LTFMQHDFGLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGLPRGVRAVVLVPTRELCDQARAHLSELMHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ----EFNRGIFDYLIVTDDSMDVQGVGGVAVEEDGDDGDSVSDESVGGDAPAGSIRVSASVALEGEDAMDQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------KGGHRGEDSEFGAARGVDFRGVSFVLNVDFPPTASSYTHRVGRTARGGASGTALSLVLAKDEKQCRTLQRVQSSQPSLAAPSLDGGXXXXXAPGSSGSIVTAMGPQAGGAVXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLKVLRHDKSVLHPLRKLDHLKHIPDYLMPPGLQTGEDPTQRQRKRIKRARGGAKRRQGQGLDQGRRKDNDPLQTFEASELGADGSYG 751
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BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A835ZDE1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE1_9STRA)

HSP 1 Score: 649 bits (1675), Expect = 2.900e-221
Identity = 417/697 (59.83%), Postives = 467/697 (67.00%), Query Frame = 1 
Query:  367 QALTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEG-----AKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKR 2442
            QA TF QHDFGLDRRLIKA AK GF+YPTLVQ+KCIPLALKGKDLLVRARTGSGKTAAF LPLLQK+L R+ AEP LA  VRAVVLVPTRELCEQ R  L ELM YCRD V +LALVDDNM+AQ+A LRDK D++VATPARLVAHLKAGN+ LKD VETLVVDEADLVLS+GY DDIR VT  LPK+CQGFLMSATLS ELE+LKRV+LHSPA+LKLEEG      + G L QF+L L +  DK LVVFAF+KLGLLEGKGLFFVN T++ YRLKLFLEQFH+RSAVLNAELPL SRLHIL+    EFNRGIFDYLI TD SMDV G GG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                      + E+G ARG+DFRGV FV+NVDFPP+  SYTHRVGRTARGGASGTALSL+  +   +   L +VQ+SQP+L     D          +++ A+G  T+                    S AQPAPLAFD+REIE+FRYRV D  KKVTRV VREARAAEL+ E++NS  L  +FK +  DLRVLRHDK+ L+P  +LDHLKHIP YLMP GL TGEDPT+RQ KR KR
Sbjct:    9 QAKTFAQHDFGLDRRLIKACAKAGFIYPTLVQSKCIPLALKGKDLLVRARTGSGKTAAFGLPLLQKLLARREAEPDLAAAVRAVVLVPTRELCEQVRGQLWELMAYCRDIVGLLALVDDNMSAQQAQLRDKPDIVVATPARLVAHLKAGNITLKDAVETLVVDEADLVLSYGYRDDIRHVTAHLPKVCQGFLMSATLSEELEELKRVILHSPAILKLEEGDASGGGEGGALLQFFLALREPADKNLVVFAFLKLGLLEGKGLFFVNATDACYRLKLFLEQFHIRSAVLNAELPLASRLHILE----EFNRGIFDYLIATDESMDV-GSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAGGPKG----------------------------------------------------------------------------------------------DAEYGVARGIDFRGVKFVMNVDFPPSARSYTHRVGRTARGGASGTALSLLCERAPAEVAALAEVQASQPALPLTEAD----------TLLGAIGTATADDGVSAQL------------SRAQPAPLAFDLREIEQFRYRVTDVAKKVTRVMVREARAAELRRELINSHALDAHFKSHPDDLRVLRHDKTALNPALRLDHLKHIPSYLMPAGLATGEDPTERQAKRKKR 584
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BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A6H5KX88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX88_9PHAE)

HSP 1 Score: 611 bits (1576), Expect = 3.420e-207
Identity = 410/590 (69.49%), Postives = 423/590 (71.69%), Query Frame = 1 
Query:  370 ALTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQA-----------RQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLH-------------------------------------------ILQA--------RFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQ 1953
            ALTFMQHDFGLDRRL+KAVAKMGFVYPTLVQNKCIPLAL+GKDLLVRARTGSGKTAAFALPLLQKILRRK AEPGL RGVRAVVLVPTRELCEQA           R HLSELMHYCRDQVS+LALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYS+DIRAVTK LPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGA+DG+L+QFYL L DK DKFLVVFAFIKLGLLEGKGLFFVN+TESSYRLKLFLEQFHVRSAVLNAELPLNSRL                                            IL+A           EFNRGIFDYLIVTD+SMDVQG GGV VE                                               XXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXX                                G++ EFGAARGVDFRGVSFVLNVDFPPT SSYTHRVGRTARGGASGTALSLVLAKDEKQ RTL +VQ
Sbjct:   42 ALTFMQHDFGLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGLTRGVRAVVLVPTRELCEQASSSVCGVTHRARAHLSELMHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKAIPPFSPTMAIREFNRGIFDYLIVTDDSMDVQGVGGVAVEEADDDEDSVSEESVGGDAPAGSIRVSASVALQEGEDAMDQSSSEEGEXXXXXXXXXXXXXXGKXXXXXXXXXXXXXXXXXXXXXTTGKADNXXXXXXXXXXGHR-----------------------------GEDSEFGAARGVDFRGVSFVLNVDFPPTASSYTHRVGRTARGGASGTALSLVLAKDEKQCRTLQRVQ 602
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BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: W7TVX7_9STRA (Putative atp-dependent rna helicase ddx56 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVX7_9STRA)

HSP 1 Score: 525 bits (1352), Expect = 6.180e-172
Identity = 356/713 (49.93%), Postives = 441/713 (61.85%), Query Frame = 1 
Query:  367 QALTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLAR--------------------------GVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDN----MAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNS-APGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDP 2412
            +A TF   DFGLDRRLIKAV++MGF+YPTLVQ+K IPLA++GKDLLVRARTGSGKTAAFALP L KIL +KA E  L                            GV A++LVPT+ELC+Q  +   +L +YCRD VSV AL+       M+AQ+A LRD+ D+LVATP+RLV+HL+AGN+ LK +V+TLV+DEADL+LSFGY +D++ V   LP+I QG LMSATLS EL+DLKRVVLHSPAVLKLEEG  DG+L QFY+ L + D K L+VF F+KLG+LEGKGLFFVN  ++ YRLKLFLEQF +RSAVLNAELPLNSRLH LQ    EFNRGIFD+LI TD S+D                                                                       XXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             ++ +   E E+G  RG+DFR V+FV+NVDFP +  +YTHR+GRTARGGA+GTALSL+   D +++  L  VQ+SQP+L     D   +S  PG +  V A GA  +                       QP PLAFD++E+E FRYRVED  + VTR++V+EAR AE+K E++NSQ L  +F+EN  + ++LRHDK +L   R  +HLKH+PDYL+P G++ G DP
Sbjct:    6 EAGTFSAFDFGLDRRLIKAVSRMGFIYPTLVQSKAIPLAMEGKDLLVRARTGSGKTAAFALPTLHKILLQKAEESTLGMSHSVSTTPATRSSRKKPKAGAQSSPSGVLALILVPTKELCDQTYRTFVDLTYYCRDVVSVQALLGGGDAAAMSAQQALLRDQPDLLVATPSRLVSHLQAGNISLKASVQTLVMDEADLILSFGYEEDVKRVVAALPRIYQGILMSATLSPELDDLKRVVLHSPAVLKLEEGRTDGELLQFYVSLPEAD-KLLLVFVFLKLGVLEGKGLFFVNGLDACYRLKLFLEQFSIRSAVLNAELPLNSRLHTLQ----EFNRGIFDFLIATDESLDTA--------------------------------------------------------------CGPESEEXXXXXEEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEVSAGRRGRRQSRGGGPAAGKEEGRPGEKEEEEDEKEYGVHRGIDFRAVNFVVNVDFPRSARAYTHRIGRTARGGANGTALSLLNKDDAREQEVLAAVQASQPALPPSEGDTLADSLGPGGE--VGATGALRT-----------------------QPTPLAFDLKELEGFRYRVEDVRRAVTRMAVKEARLAEIKQELLNSQALKTHFQENPHEFQILRHDKGILPSHRVQEHLKHVPDYLLPDGMRVGADP 626
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BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A5D6XSV1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSV1_9STRA)

HSP 1 Score: 510 bits (1314), Expect = 2.060e-167
Identity = 369/730 (50.55%), Postives = 457/730 (62.60%), Query Frame = 1 
Query:  376 TFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRK---AAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGADGSY 2556
            +F   DFGLDRRL KAVAK+ FV+ TLVQ  CIPLA++GKDLLVRARTGSGKTAAFALPLL KIL++K   ++   +   V+A+VLVPT+EL EQ R+H++ELM+YC D VS+LAL   +M AQ+A LRD  DV+VATP RLVAHL+AGN++LKD+V+TLV+DEADLVLSFGY +DIR +   LPK CQ F MSATLS ELE LK+ VLH+PAV+KLEEGA DGKL Q++L +    DK L+++A IKLG+++GK +FFVN TE++YRLKLF EQF ++SAVLNAELP NSR HI++    EFNRG+FDYLI TD+S+D                                                                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +K  ++  +G +RGVDFRGV+FV+NVDFP +V +YTHR+GRTARGGA+GTALSLV   D KQ R L +VQ+SQ  +   + D                                           AQPA LAFD+ E++ FRYRVED  + VT V+VREA+ A++K E++NS KL  +F  N  DL +L HDK++    R   HL  +PDYL+P  LQ    P ++ R   KR RGG       G D  RR DNDPL TF  ++   DG++
Sbjct:   16 SFAASDFGLDRRLTKAVAKLQFVHATLVQTHCIPLAMQGKDLLVRARTGSGKTAAFALPLLHKILQQKQDQSSAGAMLPSVKALVLVPTKELVEQIRKHMAELMYYCSDVVSLLALGGQSMNAQQALLRDVPDVVVATPGRLVAHLEAGNIKLKDSVQTLVIDEADLVLSFGYGEDIRTIFNHLPKACQSFCMSATLSPELEKLKKSVLHNPAVVKLEEGATDGKLQQYFLAV-PAADKDLLLYALIKLGVVQGKVIFFVNSTEAAYRLKLFFEQFIIKSAVLNAELPHNSRQHIIE----EFNRGLFDYLIATDDSVD-----------------------------------------------------------------------------------RDVGEASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKRPRDEAYGVSRGVDFRGVNFVINVDFPKSVRAYTHRIGRTARGGANGTALSLVGRGDSKQARALARVQASQKPVLTATKD-----------------------------------------VLAQPAELAFDLAEVDCFRYRVEDVRRAVTGVAVREAQLADVKKEMLNSDKLVAHFAANPRDLNILEHDKAI-GTARVQMHLATVPDYLVPLALQAAPPPKKKGRV-TKRVRGGG------GADGKRRTDNDPLHTFTHADADGDGAH 608
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BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A2D4BSN8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSN8_PYTIN)

HSP 1 Score: 511 bits (1317), Expect = 4.260e-167
Identity = 393/720 (54.58%), Postives = 473/720 (65.69%), Query Frame = 1 
Query:  379 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRK---AAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRI--KRARGGAKRRQGQGQDQARRKDNDPLQTF 2523
            F   DFGLD RL KAVAKM FVY TLVQ  CIPLA++GKDLLVRARTGSGKTAAFALP+L KIL+ K   A+       V+A+VLVPT+EL EQ R+H+SELM+YCRD VSVL L   +M+AQ+A LRD  D++VATP RLVAHL+AGN+ LK++V+T+V+DEADLVLSFGY +DIR++   LPK CQ F MSATLS ELE LKR VLH+ AV+KLEEGA DG+L Q+YL +   D K L+++A +KLG++ GK LFFVN TE++YRLKLF EQF ++S VLNAELP NSRLHI++    E+NRG+FDYLI TD+S+D +  G V  + XXXXXXXXXXXXXXXXXXXXXXXX XXX             XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                               + TK  ++  +G +RGVDFRGV+FV+NVDFP +V SYTHR+GRTARGGA+GTALSLV   D K  R L +VQ SQ  +   S D                                           AQPA LAFD++EI+ FRYRVED  + VTRV+VREAR A++K EI+NS KLA +F+ N  DL +L+HDK++    R   HL  IPDYL+P  LQ     T +++K+   KRAR           D ARR DNDPL TF
Sbjct:   20 FASCDFGLDTRLTKAVAKMQFVYATLVQVHCIPLAMQGKDLLVRARTGSGKTAAFALPMLHKILQHKDDEASRTSARPSVKALVLVPTKELVEQTRKHISELMYYCRDIVSVLGLGGQSMSAQQALLRDVPDIVVATPGRLVAHLEAGNLALKESVQTVVIDEADLVLSFGYGEDIRSIYNHLPKACQTFCMSATLSPELEKLKRSVLHNAAVVKLEEGASDGRLQQYYLSVPGTD-KDLLLYALLKLGVVHGKVLFFVNSTEAAYRLKLFFEQFLIKSVVLNAELPHNSRLHIIE----EYNRGLFDYLIATDDSVD-RDVGEVSDDEXXXXXXXXXXXXXXXXXXXXXXXXMXXXIEADTDDEKTAVSXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALAKKPAASA------------------------------------RGTKRPRDEGYGVSRGVDFRGVNFVINVDFPRSVRSYTHRIGRTARGGANGTALSLVAQADPKDERALQRVQRSQQPIRTASND-----------------------------------------VLAQPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREARLADVKKEILNSDKLASHFEANPRDLNILQHDKAI-GTARVQPHLATIPDYLVPVTLQAAVPQTNQKKKKHDHKRAR---------TTDGARRTDNDPLHTF 646
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BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: M4BKX7_HYAAE (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=M4BKX7_HYAAE)

HSP 1 Score: 510 bits (1314), Expect = 7.740e-167
Identity = 368/723 (50.90%), Postives = 448/723 (61.96%), Query Frame = 1 
Query:  379 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGAD 2547
            F +  FGLDRRL KAVAKM FV+ TLVQ  CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K  +   A  VRA+VLVPT+EL EQ R+HL ELM+YC+D VS+LAL   +M AQ+A LRD  DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +DIR +   LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DGKL QFYL +    DK L+++A ++LG++ GK +FFVN T ++YRLKLF EQF ++SAVLNA+LP NSR HI++     FNRG+FDYLI TD+S+D    G                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                XXXXXXXXXXXXX         +   G +  +G +RGVDFRGV FV+NVDFP +V +YTHR+GRTARGGASGTALSLV  +D K+ R L +VQ+ Q ++ + S D           ++A                              QPA LAFD++EI+ FRYRVED  + VTRV+VREA+ A++K EI+NS++LA +F+ N  DL +L HDK V+       HL  IPDYL+P  LQ    P + ++K  KR R           D  RR DNDPL TF A ++  D
Sbjct:   17 FTECAFGLDRRLTKAVAKMQFVHATLVQLHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQTKVQDAAAAAAVRALVLVPTKELVEQTRRHLLELMYYCQDTVSLLALGGQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDIRKIVNALPKACQTFCMSATLSPELETLKRSVLHNPAVVKLEEGATDGKLQQFYLPV-KAADKDLLLYALLRLGVVSGKVIFFVNSTPAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIEG----FNRGLFDYLIATDDSVDRDEVGD--------------------------------EDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADVPGEVSSSERAKVEESNINEEGDNPGGDDSENEDEVIDSDKDEESXXXXXXXXXXXXXKQRNETAGSKHDRGDDKSYGVSRGVDFRGVKFVINVDFPKSVRAYTHRIGRTARGGASGTALSLVAKEDSKEERALKRVQAKQQAVRSESND-----------VIA------------------------------QPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREAQLADVKKEILNSERLAAHFEANPRDLNMLEHDK-VVGSAPVQPHLATIPDYLVPIELQPPA-PARTKKKHNKRQRLA---------DGKRRTDNDPLHTFVAPDVSDD 650
[Close]
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A662YEI0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEI0_9STRA)

HSP 1 Score: 508 bits (1309), Expect = 4.190e-166
Identity = 402/718 (55.99%), Postives = 480/718 (66.85%), Query Frame = 1 
Query:  379 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEAS 2532
            F  ++FGLDRRL KAVAKM FV+ TLVQ  CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K         VRA+VLVPT+EL EQ R+HL ELM+YC D VS+LAL   +M+AQ+A LRD  DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +D+RA+   LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DGKL QFYL + D  DK L+++A ++LG++ GK +FFVN T ++YRLKLF EQF ++SAVLNA+LP NSR HI++    EFNRG+FDYLI TD+S+D                                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXX            KR ++  E  +G +RGVDFRGV FV+NVDFP +V +YTHR+GRTARGGASGTALSLV   D KQ R L +VQ+ Q ++ + S D                                           AQPA LAFD++E++ FRYRVED  + VTRV+VREA+ A++K E++NS +LA +F+ N  DL +L HDK V+   R   HL  IPDYL+P  LQ    P + ++K  KR R  + +         RR DNDPL TF AS
Sbjct:   19 FAAYEFGLDRRLTKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQLKQDAATSEPAVRALVLVPTKELVEQTRRHLLELMYYCSDVVSLLALGGQSMSAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDVRAIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLPV-DAADKDLLLYALLRLGVVHGKVIFFVNTTATAYRLKLFFEQFVIKSAVLNAQLPHNSRQHIIE----EFNRGLFDYLIATDDSVD------------------------------------RDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYDGKEDSEGEXXXXXXXXXXXXXXXXEPQEEAKKTAGSKRPRADDEA-YGVSRGVDFRGVQFVINVDFPTSVRAYTHRIGRTARGGASGTALSLVAKGDAKQERALKRVQARQQAVRSESND-----------------------------------------VLAQPAELAFDLKEVDCFRYRVEDVRRAVTRVAVREAQLADVKKEMLNSDRLAAHFEANPRDLNMLEHDK-VVGSARVQPHLATIPDYLVPIALQPAA-PQRTKKKPNKRQRLASGK---------RRTDNDPLHTFTAS 642
[Close]
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A3M6VU95_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU95_9STRA)

HSP 1 Score: 508 bits (1308), Expect = 4.320e-166
Identity = 378/723 (52.28%), Postives = 458/723 (63.35%), Query Frame = 1 
Query:  379 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGAD 2547
            F   +FGLDRRL KAVAKM FV+ TLVQ  CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K   P     VRA+VLVPT+EL EQ R+H+ ELM+YC+D VS+LAL   +M AQ+A LRD  DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +DIR +   LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DGKL QFYL +    DK L+++A ++LG++ GK +FFVN T+++YRLKLF EQF ++SAVLNA+LP NSR HI++    EFNRG+FDYLI TD+S+D    G                                            XXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXX               XXXXXX       KR ++  E  +G +RGVDFRGV FV+NVD P +V +YTHR+GRTARGGASGTALSLV  +D K+ R L +VQ+ Q ++ + + D           ++A                              QPA LAFD++EI+ FRYRVED  + VTRV+VREA+ A++K E++NS++LA YF+ N  DL VL HDK V+       HL  IPDYL+P  LQ    P + ++K  KR R           D  RR DNDPL TF A +   D
Sbjct:   17 FAACEFGLDRRLSKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQHKQDAPASDSAVRALVLVPTKELVEQTRRHMIELMYYCQDTVSLLALGSQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDIRTIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLSV-KAVDKDLLLYALLRLGVVSGKVIFFVNSTDAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIE----EFNRGLFDYLIATDDSVDRDEVGD------------------------------------------EXXXXXXXXXXXXXXXXXXXXXXXXSDTDSDAVKEDVEEVEXXXXXXXXXXXXXXXXXXXXXESDKGEAVKNDNGADXXXXXXEKTTVSAKRGRADDEG-YGVSRGVDFRGVQFVINVDLPKSVRAYTHRIGRTARGGASGTALSLVCKEDPKEERALKRVQAKQQAVRSEAND-----------VIA------------------------------QPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREAQLADIKKEMLNSERLAAYFEANPRDLNVLEHDK-VVGSAPVQPHLATIPDYLVPLELQPPA-PARTKKKSNKRQRLA---------DGKRRTDNDPLHTFVAPDASDD 639
[Close]
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A8K1FD86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD86_PYTOL)

HSP 1 Score: 507 bits (1306), Expect = 1.250e-165
Identity = 396/721 (54.92%), Postives = 477/721 (66.16%), Query Frame = 1 
Query:  376 TFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARG---VRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLG--DKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTF 2523
            TF   DFGLD RL KAVAKM FVY TLVQ  CIPLA++GKDLLVRARTGSGKTAAFALPLL K+L+ K  +   A     ++A+VLVPT+EL EQ R+H+SELM+YCRD VS+L L   +M AQ+A LRD  D+++ATP RLVAHL AGN+ LKD+V+T+V+DEADLVLSFGY +DIR +   LPK CQ F MSATLS ELE LK+ VLH+PAV+KLEEGA DGKL Q+YL +   DKD   L+++A IKLG++ GK +FFVN T+++YRLKLF EQF ++S VLNAELP NSR HI++    E+NRG+FDYLI TD+S+D                                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXX        + TK  ++  +G +RGVDFRGV+FV+NVDFP +V SYTHR+GRTARGGA GTALSLV   + K++R L +VQ+SQ  + A S D                                            QPA LAFD++EI+ FRYRVED  + VT V+VREAR A++K EI+NS KL+ +F+ N  DL +L+HDK++    R   HL  IPDYL+P  LQ      ++ +K  KR R G        QD  RR DNDPL TF
Sbjct:   15 TFASCDFGLDTRLTKAVAKMQFVYATLVQVHCIPLAMQGKDLLVRARTGSGKTAAFALPLLHKLLQHKQDQSSAAAAKPSIKALVLVPTKELVEQTRKHMSELMYYCRDVVSLLGLGGQSMNAQQALLRDIPDIVIATPGRLVAHLTAGNLSLKDSVQTVVIDEADLVLSFGYGEDIRTIYNHLPKACQTFCMSATLSPELEKLKKSVLHNPAVVKLEEGATDGKLQQYYLSVPVLDKD---LLLYALIKLGVVHGKVIFFVNSTDAAYRLKLFFEQFLIKSVVLNAELPHNSRQHIIE----EYNRGLFDYLIATDDSVD------------------------------------------RDVGEASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVMDXXXXXXXXXXXXXXXXXXXXXXXXXKQTTKAKARGTKRPRDEAYGVSRGVDFRGVNFVINVDFPRSVRSYTHRIGRTARGGAHGTALSLVTLSEPKEKRALDRVQASQQPIRAASND-----------------------------------------LLQQPAELAFDLKEIDCFRYRVEDVRRAVTGVAVREARLADVKKEILNSDKLSTHFEANPRDLNILQHDKAI-GTARVQPHLATIPDYLVPISLQAAVAQNKKPKKNHKRMRTG-------NQDGKRRMDNDPLHTF 637
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNE7_ECTSI0.000e+084.04DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835ZDE1_9STRA2.900e-22159.83DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6H5KX88_9PHAE3.420e-20769.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TVX7_9STRA6.180e-17249.93Putative atp-dependent rna helicase ddx56 n=1 Tax=... [more]
A0A5D6XSV1_9STRA2.060e-16750.55Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4BSN8_PYTIN4.260e-16754.58Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
M4BKX7_HYAAE7.740e-16750.90Uncharacterized protein n=4 Tax=Peronosporaceae Ta... [more]
A0A662YEI0_9STRA4.190e-16655.99Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3M6VU95_9STRA4.320e-16652.28Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A8K1FD86_PYTOL1.250e-16554.92Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:230948..239917 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score944.5
Seed ortholog evalue3.5e-272
Seed eggNOG ortholog2880.D7FNE7
Preferred nameDDX56
KEGG koko:K14810
Hectar predicted targeting categoryother localisation
GOsGO:0000463,GO:0000470,GO:0003674,GO:0003676,GO:0003678,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0007399,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0010720,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022008,GO:0022613,GO:0030154,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033677,GO:0033680,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046483,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051276,GO:0051960,GO:0051962,GO:0060284,GO:0065007,GO:0070013,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0120035,GO:0140097,GO:0140098,GO:1901360,GO:1901363,GO:2000026
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0346@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-22_001460.1
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons12
Model size2601
Cds size2598
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16974.1prot_C-linearis_contig95.16974.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig95 230948..239916 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930812.5079012-CDS-C-linearis_contig95:230947..2314511622930812.5079012-CDS-C-linearis_contig95:230947..231451Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 230948..231451 +
1690881262.9504292-CDS-C-linearis_contig95:230947..2314511690881262.9504292-CDS-C-linearis_contig95:230947..231451Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 230948..231451 +
1622930812.5680602-CDS-C-linearis_contig95:231593..2317401622930812.5680602-CDS-C-linearis_contig95:231593..231740Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 231594..231740 +
1690881262.9639566-CDS-C-linearis_contig95:231593..2317401690881262.9639566-CDS-C-linearis_contig95:231593..231740Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 231594..231740 +
1622930812.586356-CDS-C-linearis_contig95:232605..2327881622930812.586356-CDS-C-linearis_contig95:232605..232788Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 232606..232788 +
1690881262.9736834-CDS-C-linearis_contig95:232605..2327881690881262.9736834-CDS-C-linearis_contig95:232605..232788Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 232606..232788 +
1622930812.94015-CDS-C-linearis_contig95:233205..2333691622930812.94015-CDS-C-linearis_contig95:233205..233369Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 233206..233369 +
1690881262.9829655-CDS-C-linearis_contig95:233205..2333691690881262.9829655-CDS-C-linearis_contig95:233205..233369Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 233206..233369 +
1622930812.9566174-CDS-C-linearis_contig95:233947..2340741622930812.9566174-CDS-C-linearis_contig95:233947..234074Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 233948..234074 +
1690881262.992162-CDS-C-linearis_contig95:233947..2340741690881262.992162-CDS-C-linearis_contig95:233947..234074Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 233948..234074 +
1622930812.970195-CDS-C-linearis_contig95:234596..2347401622930812.970195-CDS-C-linearis_contig95:234596..234740Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 234597..234740 +
1690881263.0010216-CDS-C-linearis_contig95:234596..2347401690881263.0010216-CDS-C-linearis_contig95:234596..234740Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 234597..234740 +
1622930812.9832263-CDS-C-linearis_contig95:235185..2357261622930812.9832263-CDS-C-linearis_contig95:235185..235726Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 235186..235726 +
1690881263.0115871-CDS-C-linearis_contig95:235185..2357261690881263.0115871-CDS-C-linearis_contig95:235185..235726Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 235186..235726 +
1622930812.999895-CDS-C-linearis_contig95:236967..2371101622930812.999895-CDS-C-linearis_contig95:236967..237110Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 236968..237110 +
1690881263.0207508-CDS-C-linearis_contig95:236967..2371101690881263.0207508-CDS-C-linearis_contig95:236967..237110Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 236968..237110 +
1622930813.0158758-CDS-C-linearis_contig95:237885..2381281622930813.0158758-CDS-C-linearis_contig95:237885..238128Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 237886..238128 +
1690881263.0299826-CDS-C-linearis_contig95:237885..2381281690881263.0299826-CDS-C-linearis_contig95:237885..238128Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 237886..238128 +
1622930813.04027-CDS-C-linearis_contig95:238482..2385791622930813.04027-CDS-C-linearis_contig95:238482..238579Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 238483..238579 +
1690881263.0391216-CDS-C-linearis_contig95:238482..2385791690881263.0391216-CDS-C-linearis_contig95:238482..238579Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 238483..238579 +
1622930813.0573683-CDS-C-linearis_contig95:239028..2391531622930813.0573683-CDS-C-linearis_contig95:239028..239153Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 239029..239153 +
1690881263.0478861-CDS-C-linearis_contig95:239028..2391531690881263.0478861-CDS-C-linearis_contig95:239028..239153Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 239029..239153 +
1622930813.0788143-CDS-C-linearis_contig95:239736..2399161622930813.0788143-CDS-C-linearis_contig95:239736..239916Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 239737..239916 +
1690881263.0585175-CDS-C-linearis_contig95:239736..2399161690881263.0585175-CDS-C-linearis_contig95:239736..239916Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 239737..239916 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig95.16974.1

>prot_C-linearis_contig95.16974.1 ID=prot_C-linearis_contig95.16974.1|Name=mRNA_C-linearis_contig95.16974.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=866bp
LAISGIQIAKVRHLLPSAAHKRNKNPTYYSAVSLPPSTPNVQHPDSAKSN
STQHRHTRRCNRQASSLSFPAMVRPKAKSPGKDGTKKRKELERQEKEQQL
TANAGAGATPADDDQAEQQQEQQALTFMQHDFGLDRRLIKAVAKMGFVYP
TLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLA
RGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAAL
RDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIR
AVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQ
FYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHV
RSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPV
EEEEEEREDDGGALVTGSFSIVADGAAAAAAAAASSGGQGEDEMDEASSS
GEGSEGSEAEEDGGGVDDDDDSDDDDKDEDDDGSDGSDSKEGEEEEEEEE
EGSAATKKQQQQQQQKKKKEAAGASSSSSKRTKSGQEPEFGAARGVDFRG
VSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQV
QSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSADGGGAAAAAVAAVGG
GGGNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEI
VNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQT
GEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGADG
SYGVRGPGGAPREGGG
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mRNA from alignment at C-linearis_contig95:230948..239917+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig95.16974.1 ID=mRNA_C-linearis_contig95.16974.1|Name=mRNA_C-linearis_contig95.16974.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8970bp|location=Sequence derived from alignment at C-linearis_contig95:230948..239917+ (Chordaria linearis ClinC8C monoicous)
CTGGCTATCTCGGGCATCCAAATCGCAAAAGTGAGGCACCTCCTTCCCTC
AGCAGCGCACAAGCGTAACAAAAATCCAACCTATTACTCTGCTGTATCTC
TACCACCAAGTACACCCAACGTGCAACACCCCGACAGCGCTAAATCTAAC
AGCACCCAACACCGGCACACAAGACGTTGCAACAGGCAGGCCAGCTCTTT
AAGCTTTCCAGCCATGGTCAGGCCTAAGGCTAAGTCCCCCGGGAAAGATG
GGACCAAAAAGCGCAAGGAGCTTGAGCGCCAGGAGAAAGAGCAGCAGCTC
ACCGCTAACGCTGGCGCTGGCGCCACCCCAGCGGACGATGACCAGGCGGA
GCAGCAGCAGGAGCAGCAGGCGTTGACCTTCATGCAGCACGACTTCGGGC
TGGACCGTAGGCTCATCAAGGCCGTTGCCAAGATGGGGTTCGTGTACCCG
ACCCTCGTGCAAAACAAGTGCATCCCGCTCGCGCTTAAGGGGAAGGACCT
GCTGGTGAGTAACGCCACCCCCGTCAGGACTGGTGTGGTGTTTGATTAGC
TTGGGGGGGTCTTCACTAGTGATAGGATACCTCCGATTTCCCCACAAAAC
ACGTCAAAATTGCACCCGTTTCTGGGGGTCTCGCCCCCCTAACCAGGTAA
GGGCGCGAACCGGTTCCGGGAAGACGGCGGCGTTCGCGCTGCCTTTGCTG
CAGAAGATCTTGAGGCGGAAGGCGGCCGAGCCTGGGCTGGCGAGGGGGGT
GCGGGCAGTGGTGCTCGTGCCGACCAGGGAGCTCTGCGAGCAGGTGAAAG
GGGGGGGGGGGAAGGGAACAGGAGGGGGCCGGTCTCCTACAATAGTGTAG
CGTGCGCTTTTTTTCTTTCGCATGGTTTTTGTCTGTTTTTTGCTTTCGAA
GCGTCAGCATTCCATGACGAGCCTGCGTGAGGAGTTCTGCCGAGGGGGGC
TGTTGTGGTCTACAGCAGTGGCGTAGGCCGTGCTGGCCTACCCGGCTGGC
CGATCCGACGAAACTTTTTAGTCTCGGTGGGCCTTCGCTTGTGTCGAATG
TGTTTCAAAGCTGGAGGGTTCTTGTTGGCCGGCCGGTACGTCTGTACATT
TGCCTACATACATATGCCGGTCGCCCCGGCGGTCTAGTGGATACCCACGC
AGTGTACTAAGCGCCAGGTCATGGGTTCTGGCCCCGACGAAGTGAGTTTT
TTTCTCACTTTCGTTCCTGGTACTGCTGTACATTGAAAACTTGCTGCACA
TGGTAGCTTGTTATTTTATTAAAAATACTACTTTCCACTTCATTGTTGAC
GAGGATGGGGAGTGCTGAACCCTGCTCGCGTTCAAAAGTATCAAAGGCAT
GCACCGCAGGAGGTAGGTGGAGACACCCCCTCCTGTGTGACCCCGGATGG
TAGCCTAGCCAGTTGCTGTGAAGAGGAGGAGGCAGGCTACGAAAAAAACT
TTAGTGGGTGAGAAGAAAAAAAAATGTGGGCCCGTTGTGGGCGGGGGACG
ACGTGGTTGTTCGCTTGCTCTCGCGCCGCCTGCGCACAGCTCTAAATCCA
CCCGATGTGTGCTTGCTTGTGTGGTGTGGGTGCGTGCGTGCGCTAGTGCA
TTGTTTCGCCTGCACTCAAACGCCACGTCTCCCTCCCAAATCATCCCTAC
ATGCACAGGCTCGGCAACACCTGTCGGAGCTGATGCACTACTGCCGCGAC
CAAGTCTCTGTGCTGGCGCTGGTGGACGACAACATGGCGGCACAGGAGGC
GGCGCTCAGGGACAAGGCCGACGTGCTCGTCGCCACCCCGGCGAGGCTCG
TGGCGCACTTAAAGGCCGGGAACGTGGAGCTGAAGGACACGGTGAGCCCC
GGGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTGTA
ATAGCGGTTGCAGTGGTTATGGTTGTAATCGATGTCGTACCGTCACCTGA
GAACAACGTCACCGCTATCACATGTCTTTTTGAACAGCAACAAGGACGGT
ATTACTTCTGCTGTAGGTACCCTACCCGTCACCGTGCCCGGCCAGCTACG
CTATGCCTTCGGGGCCCACGTTATTTCCAACCATCCATTGATGCTGCTGT
ACCGACACAAAGCTCAAACATTTTTTCTCCACCACGTTGTTACAGCACAA
ACGTTATTTTTCCTCCTTCCCCCCGAGCCCCCCGAGCCCCCCGACCCCAA
AAAACCAAACCAACCAACCCTTTAAACACGGTGATACGGTAATACGGTAC
TACGGTAGGTGGAAACGCTGGTAGTGGACGAGGCAGACCTGGTTCTATCG
TTCGGTTACTCGGACGACATTCGAGCGGTCACCAAGTGCCTCCCCAAGAT
CTGCCAGGGGTTCCTCATGTCGGCCACGCTCAGCGCCGAGCTGGAGGATC
TCAAGCGCGTCGTGCTGCACAGGTGTGGGCCAGTTGGACGGGGTAGGGGC
GTTGGGGGAGGTTCAGGAGGGGGAATGCCGGGGAATGTAGCGGGGATGTG
TGTGGGTGTGGGTGGATGAGTCTTACAAGTATACCCGGAGCACATTTCCA
GCGTGTGGGTTGTCGCGATTTCGTTTATTTTTCCCGCGCTTTTGTTTCCT
GGTGTCTCGACCTCGTCACTCAGTGTGCCTTGGTGTGCATGCCTCGGCCT
ATCTGACTGTGTGTCTGTGCGCGTGTGGCTCGAGAACCCTTCTCTCGGTT
CTCGTTAAGAATAACAGACATTTAACAGGCGGCTCGATTCTGTCTTTTAT
TTTGATATTCTTGTGCATTGTAACCATGTGTTTGACGGTAGTTTGGCTGC
TGTATTGTAGGCGGATGGTCTGCACGGAAGATATCTTCATTGGTGTCGTG
CAGTTTATGCTTGTCTTGTGTTTCGCGCAGTGCTTTATCTTTTGGTATCC
TGCTTGTTCGTTCCAACCCAACCCAAACACAGATGTATCGAGCGGGCCGT
AGATCTCAATCACCCCCCCCCGATCTCATATTTTCTCACGACACGTTTAG
CCCGGCGGTTCTGAAGTTGGAGGAAGGGGCGAAGGACGGCAAGCTGGCTC
AGTTTTACCTTGGCCTGGGCGACAAGGACGATAAGTTCCTCGTGGTGTTT
GCCTTCATCAAGCTCGGCCTGTTGGAGGTGAGGTAGAGGGATTTCACCGT
CTATTTCAGGCTGCTTCTCTGCCGTCGTCGTCGTCGTCGCCGCCGTCATT
GTTGTTGTTGTTGACAGTCCCGTTGTTGACAGTCCCGTTGTTGATGGTAA
TCTTCATGTTCATGTTGTTGTTGTTGTTGTTGTTGTTGTTGACCCGCGCT
TGCAGCTTGCGATGCACTCTGTTCCTTGCTGTCGGTACAGCCCGCGCACA
AAAGCAACCAAACTACCTGGTACACGTTATTTGAGGTCAGTCATGACATG
TGTTTGTGCGTGTGTGTGTGTGTGTATGTTTTTTTTTTTACCCCTTTATC
ACGCTGTTGAAGCGTGCATGCCGCACGCGAATCGCCACAACATCGATGCC
ACACCACGGCACACGCCACGCCACACACTACACGTGCTACCGGCTGAACC
ATTCCCTTCCACCTTCACCATGCCGCTTGCAACCACCGACGGCACAAAAT
CATCATTGATCGATGTCAATCAAATATTGGTGTCATCGATTTCAATCAGG
GGAAAGGGCTGTTTTTCGTCAACGACACGGAGTCGTCGTACCGCCTCAAG
CTCTTCCTGGAGCAATTTCACGTCAGGTCCGCCGTCCTCAACGCCGAGCT
GCCACTCAACTCGAGGCTGCACATCCTACAGGCGCGATTTTGTGTTTCCT
TGTGTGTTATGCATGCATGCATGTCGTGGGGCGCAATGGCTGTCCAAAAA
GCAAGAACGCTGGTCCCGGCCTGACCTCAGCGAGCGAGCAGCGAGCAGCA
AAGTGCCCCCCTTTTCTGCGTGTACTTCTGCGCGTGTTGTTGTTGTTGTT
GCTGTTGTTGTTGTTGTTGTTGTTGTTATTGTTGTTGTTGTTGTTGTTGA
TAGTGATGATGATGATGATGTCCACTCCGACCTCTCGGCTGAGATAGATA
CAATTCATAGTTTGCACTCGAGGATAACAATTTACACCCTGTCCGCCCAC
CTCTCCGCTATCTAGCAAGACACGCTCTTCTTCCAGCTGGAAGAAACACG
AGATTCAAAGGCGACGCCCAAATAGAGCTTGGCTCGGACTAATTAATTTT
CTCAAGCCCGTAAAAAACGCCTTCCCTGAAAACCCCAGGAGTTCAACCGG
GGGATCTTCGACTACCTCATCGTGACCGACAACAGCATGGACGTGCAGGG
GTTCGGTGGGGTCCCTGTGGAGGAAGAGGAAGAGGAGCGGGAGGACGACG
GCGGAGCTCTCGTCACTGGTAGCTTCAGCATCGTTGCCGACGGCGCTGCG
GCTGCCGCTGCGGCTGCCGCTTCTTCAGGAGGGCAGGGAGAAGACGAGAT
GGACGAGGCATCTTCGTCGGGTGAGGGCTCGGAGGGGTCTGAAGCTGAAG
AAGACGGGGGCGGCGTCGATGATGATGATGATAGTGATGATGATGATAAA
GATGAGGATGATGATGGTAGTGATGGTAGTGACAGCAAGGAGGGCGAGGA
GGAGGAGGAAGAGGAGGAGGAGGGTTCAGCCGCGACCAAGAAGCAGCAGC
AGCAGCAGCAGCAGAAGAAGAAGAAAGAGGCCGCGGGGGCTTCTTCTTCT
TCTTCCAAGAGGACTAAGAGCGGGCAAGAGCCGGAGTTTGGGGCCGCCCG
AGGGGTTGACTTCCGCGGGGTGTCGTTCGGTGAGCTTGCCAAGTTTGTTT
TGGGGCCCGCTTTGTCTCTTGCCTCTTGCCTCTTGTCTTTGTCTCTGCCT
CTGCCTCTGCCTCTGTCTGTCTCTGTCTTTGTCTCTCCAATTTTTTTGTT
GTATTTTTTGTTGTCAAGTCGACACCAGTGCTTTTGTCTATCGACGTCCA
GTCTATGGTATGATCCGTAAAACAGTTATTTATTCCCTCAACGGGGGGAG
GTTTATAGTAGACATATACTACAAGCCCGCCCACCCGCCCCCGGCTCCAA
GGGTAACACATCTATCTGTTCGTGTGCGTGTGCGTGAAAATAAGAAATGG
TAAGCAATAAGTGTGTGTGTGTGTGTGTGTGTTTTGTTTTTTTCCACGTC
TTGTTTTTTTTGTTTGGTGTCGTGGTGGGACATGTGGGACACGCGGGACA
TGTAGGGGCAGGGGGAACAGCGAGGTGAGGTGAGGTGAGGTGAGGTGAGG
TGAGGTGACCTCTCTCCAAAGGGCGAGCTGGGTTCCCTCTTTGCCCGTGC
GCGTTTGCTTTTCCTGCTTGATCTGCTTCGGCGTAGTTCGTATTATTATT
CGGTCCGTAACCCAACCCCCAACGTTTTGTCGATCTTGTACATACATACG
TTGTGGAGGTCATCATTCGTTTCTGTGGCATGCCTCTCCCTCGTATCTTG
TGCACTGTTTGCTGTGTGTTCTCTGGTGCGTGTTCTCTGATGCGTGTGTG
GGTGTGTGGGTGTGTGTATGTGTGTGTGTGTGTGTATGTGCGTGTATGTG
TGTGCATGTAGTGTGTTTTATTTTTTTCTCGCCCATTAATGTTTTTTCGT
AGCCTGCCTCCTCCTCTTCACTACAACCAGCTAGGCTACCATCCGGGGTC
ACACAGGAGGGGATGTCTCCACCTACCTCCTGCGGTGTATGTGTGTGGGT
GTATGTATATGTATGTATGTATTTGTGTGTATTTGTAATTTATGGTGCCT
GCCTCGTTCGTGTCGTCTCCCAAAACCATTAATCGGTATCTCTATTCCTT
TTCGGATGATCGATCGCTGATCAACTTCTTTTTGTCTCTGTCTCGCGGCT
CGCCCTCTTCGTCCCCTGCCTTGCTTGCCTGCCTTGTTGGTCGTACCCTC
GGGCGTCGGCCTCCTGCTCCTGCTGCTCCTGCTGCTCCTGCTGCCGGGCT
GGCTGAACTAAATGCATCTTGCTCCCCCCCCCCAAAAAAAAAAAAAAAAA
AAAAAAACTGCCCGCCTCAGTCCTTAACGTGGATTTCCCCCCTACCGTGT
CGAGCTACACGCACCGTGTCGGCCGGACGGCGCGAGGAGGGGCGAGCGGC
ACAGCCCTAAGCTTGGTCCTCGCCAAGGATGAGAAGCAGCGTCGGACCCT
CCATCAAGTGCAGGTAAACACGTGAATACGTTCAAGTACGTGGGCGGCGT
GCATGGGTCCGTTCGTGTGTGTGTGTGTGTGCGTGCGCGGATCTTGTCTG
CCTTGTGGATGAATGTGTTGGTGCCTTCTATCGAAGAACACTCATGCCGA
ATCGGACCGGGATTAAAGACATACCATACCTTTAGCTCACCATACATCGA
TATTGATATTTGCGCGCACAATACAGAGTAGTGCCCCCAAGGATAGGCGG
GAACAAGAAGAGCAGAGCAGGGAAGACTCTTGACATGCAGTGCCGGAACA
AGGCCCTTACCTAGTAGAGTAGACGCAGTAGCAGGGTGAGGGGGCGACGT
GAAGGGCTCGTTTGAGTCGGACGGGGGAGGGGCAGGGGGACGGGGTGGTG
GCAACGCCCGTTGTGCGTTGCCCAACAGCCGTTAAATTGTTAAATTAGCT
GTGTCTTGGTAAACCGTCAACGGAAACGACGAGACAAGACAAGACAAGAC
AAGACAAGACAAGCCCCTCCTCCCCCTTTGTGCCAAGCCTTGCTGGGGTC
CCGTAACTTAAGGGTTTGGGTGTGGGTTAGTCTAAAGGTTGTACAATGGC
GAGTCCCCTCCCCTTCCCTTCAAAATTCACCACCTTTGTTCAATGCCTTG
AACAGCCTCGGCAGGCACGACCCGAGCCATAACCACCACCTCCTTTTCTC
CTCCTCCTGCTACTCCTGCTGCTGCTCCTCTCCTCTCCTGCCCGGCCTCT
CTCCCACTGAACCGAAAAACCTCGACCAACCAAATCAGAGCTCCCAGCCT
TCTCTGGCCGCCCCGTCGCTCGACGGAGGCGGTAACAGTGCCCCGGGGAG
CGACTCCATCGTGGCGGCGATGGGCGCCCAGACGTCCGCGGATGGGGGCG
GGGCTGCTGCTGCTGCGGTGGCGGCAGTTGGCGGTGGGGGGGGGAATAGC
TGGGCGCAGCCGGCCCCCCTGGCGTTTGACATCCGCGAGATCGAGCGGTT
CAGGTACCGCGTCGAGGATACGCTGAAGAAGGTGAGGAGCGGGTGTTTCG
TTGACTGGGGGGGTAGTGTTGGTCGTTGCGGGTTGCGAGCTTCGTGGGGC
CGTACAGCAGCAGTCGTCAGACAAGGAGAAAGGTTTGTGTGCGGCTTGCT
TGCTTGTTAGGAGGGGAGGGGAGGGGGTCGCTTCTCTTGTTTGTCCCTGA
AGACGTCGAGGGGGGGTGCCGAGGAGTTCCCCCCTTGATTTGTCTGTCGA
GGGCGCACGCTGAAGGAGAGTGGGTGGGACAGTCCCGTTGTTGTCGTTGT
TGTTGCTGTTGCTGTTGGACGAAAATCATGCCGGAAGGCGGGGTGGGACC
TGAATTCTGCTGGTCTTGTGTCGCTGGCATCATAGGTGACGCGGGTTAGT
GTGAGGGAGGCGAGGGCGGCGGAGCTGAAGGCGGAGATCGTCAACTCTCA
AAAGCTCGCAGGCTACTTTAAGGAAAATGCAGGTACGCTCGGTGTTCTTC
GAAGTGTGCCCAACATATAAAATATGTCCGCTTATTTCGGCTGTGCCGTG
ATGTGCGCTGCTACATACATAGGTGCGTTTGTGTTTGCGGGTTCAATCCA
TTCCAATCCTATACTAAGGTACACCGACTCGGGTGCTTTTTTCAGGAGGA
GCGCTAGTCCCTCCCGTTCATCTCTCTCTCTGTCTCTCTCTCCCTTTTCT
CTTCATCTCTTCTCTCTCTTTCTCTTTTCTCTCGTGTCTGTATTTGCCCT
CTTTCTCTGTCTCACCATCTCTATTTCGCTCTCTTATTCTCTGTCTGTGT
ATTTATGCCGCTCTCTCGTTCTCCGTCTCGCCATCTCTATCTCGCTTGTC
GCTTGTCGCATCTCGCTTGTCGCTTGTCGCTTGTCGCTTGTCGCTTGTCG
CTTGTCGCTTGTCGCTTGTCTGCTCCCGAAGGCGACCTGAGAGTGCTGCG
GCACGACAAGTCAGTGCTGCATCCCCTCCGCAAGCTGGACCACCTCAAGC
ACATCCCCGACTACCTGATGCCGAGGGGGTTACAGACCGGGGAGGACCCC
ACGCAGGTGTGTACAGCTACATTACAGTCGACGTGAAGTGAAGCCAACGG
CAAGCTAAGCTAAGCTAAGCTAAGCTGAGCTAAGCTACAGGTACAGGCGA
GATTAGTTGCATGAGGTGAACGGCATATCGAGAAGCCAAATAAGCTTTTG
ATATGAGATGGTTTGCGTCAAATGGTGCTGCCAGTCTGAACCACCAGAAT
CACAGAGTCACTGGAGGGTGTACAAGAAGCGAACCTTCACCTTTTTGCGT
GCCTTCGCCCTACTGTACTATGTACGGCAGTTCTTCCCCCTCCCCCATTT
CTTTTTCGTTTTTCCTTCTGTTTCTCTTGCCGAAATGCAGTCTTTGTAGA
ACAATTTGTAAAGTTTAGATATGTGAGTAAAAACACAATGCAAGAACAAA
ATTGTCATCGAAATCTGCCTTCCACATGTCTGAAACTCCCATGTTTCTCT
CACGCTCTCAACAAAAAAACATGTTTTTCAGATTGCAAAATCAGCGAATG
GATATATACACCAGGTACATACTTCCGATACATAAAATAATTTAAACCTA
CACTTTTTTCATTCCCCCCTTGTTTTTGTCCATCCGCAGCGGCAGAGGAA
GCGGATAAAGCGCGCGAGGGGCGGCGCCAAGCGGCGCCAGGGGCAGGGCC
AGGACCAGGCAAGGAGAAAGGACAACGACCCACTTCAGACGTTCGAGGCC
TCGGAGCTCGGCGCTGACGGCAGCTACGGCGTGCGCGGGCCGGGCGGCGC
GCCCAGGGAAGGAGGAGGAG
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Coding sequence (CDS) from alignment at C-linearis_contig95:230948..239917+

>mRNA_C-linearis_contig95.16974.1 ID=mRNA_C-linearis_contig95.16974.1|Name=mRNA_C-linearis_contig95.16974.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5196bp|location=Sequence derived from alignment at C-linearis_contig95:230948..239917+ (Chordaria linearis ClinC8C monoicous)
CTGGCTATCTCGGGCATCCAAATCGCAAAAGTGAGGCACCTCCTTCCCTC
AGCAGCGCACAAGCGTAACAAAAATCCAACCTATTACTCTGCTGTATCTC
TACCACCAAGTACACCCAACGTGCAACACCCCGACAGCGCTAAATCTAAC
AGCACCCAACACCGGCACACAAGACGTTGCAACAGGCAGGCCAGCTCTTT
AAGCTTTCCAGCCATGGTCAGGCCTAAGGCTAAGTCCCCCGGGAAAGATG
GGACCAAAAAGCGCAAGGAGCTTGAGCGCCAGGAGAAAGAGCAGCAGCTC
ACCGCTAACGCTGGCGCTGGCGCCACCCCAGCGGACGATGACCAGGCGGA
GCAGCAGCAGGAGCAGCAGGCGTTGACCTTCATGCAGCACGACTTCGGGC
TGGACCGTAGGCTCATCAAGGCCGTTGCCAAGATGGGGTTCGTGTACCCG
ACCCTCGTGCAAAACAAGTGCATCCCGCTCGCGCTTAAGGGGAAGGACCT
GCTGCTGGCTATCTCGGGCATCCAAATCGCAAAAGTGAGGCACCTCCTTC
CCTCAGCAGCGCACAAGCGTAACAAAAATCCAACCTATTACTCTGCTGTA
TCTCTACCACCAAGTACACCCAACGTGCAACACCCCGACAGCGCTAAATC
TAACAGCACCCAACACCGGCACACAAGACGTTGCAACAGGCAGGCCAGCT
CTTTAAGCTTTCCAGCCATGGTCAGGCCTAAGGCTAAGTCCCCCGGGAAA
GATGGGACCAAAAAGCGCAAGGAGCTTGAGCGCCAGGAGAAAGAGCAGCA
GCTCACCGCTAACGCTGGCGCTGGCGCCACCCCAGCGGACGATGACCAGG
CGGAGCAGCAGCAGGAGCAGCAGGCGTTGACCTTCATGCAGCACGACTTC
GGGCTGGACCGTAGGCTCATCAAGGCCGTTGCCAAGATGGGGTTCGTGTA
CCCGACCCTCGTGCAAAACAAGTGCATCCCGCTCGCGCTTAAGGGGAAGG
ACCTGCTGGTAAGGGCGCGAACCGGTTCCGGGAAGACGGCGGCGTTCGCG
CTGCCTTTGCTGCAGAAGATCTTGAGGCGGAAGGCGGCCGAGCCTGGGCT
GGCGAGGGGGGTGCGGGCAGTGGTGCTCGTGCCGACCAGGGAGCTCTGCG
AGCAGGTAAGGGCGCGAACCGGTTCCGGGAAGACGGCGGCGTTCGCGCTG
CCTTTGCTGCAGAAGATCTTGAGGCGGAAGGCGGCCGAGCCTGGGCTGGC
GAGGGGGGTGCGGGCAGTGGTGCTCGTGCCGACCAGGGAGCTCTGCGAGC
AGGCTCGGCAACACCTGTCGGAGCTGATGCACTACTGCCGCGACCAAGTC
TCTGTGCTGGCGCTGGTGGACGACAACATGGCGGCACAGGAGGCGGCGCT
CAGGGACAAGGCCGACGTGCTCGTCGCCACCCCGGCGAGGCTCGTGGCGC
ACTTAAAGGCCGGGAACGTGGAGCTGAAGGACACGGCTCGGCAACACCTG
TCGGAGCTGATGCACTACTGCCGCGACCAAGTCTCTGTGCTGGCGCTGGT
GGACGACAACATGGCGGCACAGGAGGCGGCGCTCAGGGACAAGGCCGACG
TGCTCGTCGCCACCCCGGCGAGGCTCGTGGCGCACTTAAAGGCCGGGAAC
GTGGAGCTGAAGGACACGGTGGAAACGCTGGTAGTGGACGAGGCAGACCT
GGTTCTATCGTTCGGTTACTCGGACGACATTCGAGCGGTCACCAAGTGCC
TCCCCAAGATCTGCCAGGGGTTCCTCATGTCGGCCACGCTCAGCGCCGAG
CTGGAGGATCTCAAGCGCGTCGTGCTGCACAGGTGGAAACGCTGGTAGTG
GACGAGGCAGACCTGGTTCTATCGTTCGGTTACTCGGACGACATTCGAGC
GGTCACCAAGTGCCTCCCCAAGATCTGCCAGGGGTTCCTCATGTCGGCCA
CGCTCAGCGCCGAGCTGGAGGATCTCAAGCGCGTCGTGCTGCACAGCCCG
GCGGTTCTGAAGTTGGAGGAAGGGGCGAAGGACGGCAAGCTGGCTCAGTT
TTACCTTGGCCTGGGCGACAAGGACGATAAGTTCCTCGTGGTGTTTGCCT
TCATCAAGCTCGGCCTGTTGGAGCCCGGCGGTTCTGAAGTTGGAGGAAGG
GGCGAAGGACGGCAAGCTGGCTCAGTTTTACCTTGGCCTGGGCGACAAGG
ACGATAAGTTCCTCGTGGTGTTTGCCTTCATCAAGCTCGGCCTGTTGGAG
GGGAAAGGGCTGTTTTTCGTCAACGACACGGAGTCGTCGTACCGCCTCAA
GCTCTTCCTGGAGCAATTTCACGTCAGGTCCGCCGTCCTCAACGCCGAGC
TGCCACTCAACTCGAGGCTGCACATCCTACAGGCGCGATTTTGTGGGAAA
GGGCTGTTTTTCGTCAACGACACGGAGTCGTCGTACCGCCTCAAGCTCTT
CCTGGAGCAATTTCACGTCAGGTCCGCCGTCCTCAACGCCGAGCTGCCAC
TCAACTCGAGGCTGCACATCCTACAGGCGCGATTTTGTGAGTTCAACCGG
GGGATCTTCGACTACCTCATCGTGACCGACAACAGCATGGACGTGCAGGG
GTTCGGTGGGGTCCCTGTGGAGGAAGAGGAAGAGGAGCGGGAGGACGACG
GCGGAGCTCTCGTCACTGGTAGCTTCAGCATCGTTGCCGACGGCGCTGCG
GCTGCCGCTGCGGCTGCCGCTTCTTCAGGAGGGCAGGGAGAAGACGAGAT
GGACGAGGCATCTTCGTCGGGTGAGGGCTCGGAGGGGTCTGAAGCTGAAG
AAGACGGGGGCGGCGTCGATGATGATGATGATAGTGATGATGATGATAAA
GATGAGGATGATGATGGTAGTGATGGTAGTGACAGCAAGGAGGGCGAGGA
GGAGGAGGAAGAGGAGGAGGAGGGTTCAGCCGCGACCAAGAAGCAGCAGC
AGCAGCAGCAGCAGAAGAAGAAGAAAGAGGCCGCGGGGGCTTCTTCTTCT
TCTTCCAAGAGGACTAAGAGCGGGCAAGAGCCGGAGTTTGGGGCCGCCCG
AGGGGTTGACTTCCGCGGGGTGTCGTTCGGAGTTCAACCGGGGGATCTTC
GACTACCTCATCGTGACCGACAACAGCATGGACGTGCAGGGGTTCGGTGG
GGTCCCTGTGGAGGAAGAGGAAGAGGAGCGGGAGGACGACGGCGGAGCTC
TCGTCACTGGTAGCTTCAGCATCGTTGCCGACGGCGCTGCGGCTGCCGCT
GCGGCTGCCGCTTCTTCAGGAGGGCAGGGAGAAGACGAGATGGACGAGGC
ATCTTCGTCGGGTGAGGGCTCGGAGGGGTCTGAAGCTGAAGAAGACGGGG
GCGGCGTCGATGATGATGATGATAGTGATGATGATGATAAAGATGAGGAT
GATGATGGTAGTGATGGTAGTGACAGCAAGGAGGGCGAGGAGGAGGAGGA
AGAGGAGGAGGAGGGTTCAGCCGCGACCAAGAAGCAGCAGCAGCAGCAGC
AGCAGAAGAAGAAGAAAGAGGCCGCGGGGGCTTCTTCTTCTTCTTCCAAG
AGGACTAAGAGCGGGCAAGAGCCGGAGTTTGGGGCCGCCCGAGGGGTTGA
CTTCCGCGGGGTGTCGTTCGTCCTTAACGTGGATTTCCCCCCTACCGTGT
CGAGCTACACGCACCGTGTCGGCCGGACGGCGCGAGGAGGGGCGAGCGGC
ACAGCCCTAAGCTTGGTCCTCGCCAAGGATGAGAAGCAGCGTCGGACCCT
CCATCAAGTGCAGTCCTTAACGTGGATTTCCCCCCTACCGTGTCGAGCTA
CACGCACCGTGTCGGCCGGACGGCGCGAGGAGGGGCGAGCGGCACAGCCC
TAAGCTTGGTCCTCGCCAAGGATGAGAAGCAGCGTCGGACCCTCCATCAA
GTGCAGAGCTCCCAGCCTTCTCTGGCCGCCCCGTCGCTCGACGGAGGCGG
TAACAGTGCCCCGGGGAGCGACTCCATCGTGGCGGCGATGGGCGCCCAGA
CGTCCGCGGATGGGGGCGGGGCTGCTGCTGCTGCGGTGGCGGCAGTTGGC
GGTGGGGGGGGGAATAGCTGGGCGCAGCCGGCCCCCCTGGCGTTTGACAT
CCGCGAGATCGAGCGGTTCAGGTACCGCGTCGAGGATACGCTGAAGAAGA
GCTCCCAGCCTTCTCTGGCCGCCCCGTCGCTCGACGGAGGCGGTAACAGT
GCCCCGGGGAGCGACTCCATCGTGGCGGCGATGGGCGCCCAGACGTCCGC
GGATGGGGGCGGGGCTGCTGCTGCTGCGGTGGCGGCAGTTGGCGGTGGGG
GGGGGAATAGCTGGGCGCAGCCGGCCCCCCTGGCGTTTGACATCCGCGAG
ATCGAGCGGTTCAGGTACCGCGTCGAGGATACGCTGAAGAAGGTGACGCG
GGTTAGTGTGAGGGAGGCGAGGGCGGCGGAGCTGAAGGCGGAGATCGTCA
ACTCTCAAAAGCTCGCAGGCTACTTTAAGGAAAATGCAGGTGACGCGGGT
TAGTGTGAGGGAGGCGAGGGCGGCGGAGCTGAAGGCGGAGATCGTCAACT
CTCAAAAGCTCGCAGGCTACTTTAAGGAAAATGCAGGCGACCTGAGAGTG
CTGCGGCACGACAAGTCAGTGCTGCATCCCCTCCGCAAGCTGGACCACCT
CAAGCACATCCCCGACTACCTGATGCCGAGGGGGTTACAGACCGGGGAGG
ACCCCACGCAGGCGACCTGAGAGTGCTGCGGCACGACAAGTCAGTGCTGC
ATCCCCTCCGCAAGCTGGACCACCTCAAGCACATCCCCGACTACCTGATG
CCGAGGGGGTTACAGACCGGGGAGGACCCCACGCAGCGGCAGAGGAAGCG
GATAAAGCGCGCGAGGGGCGGCGCCAAGCGGCGCCAGGGGCAGGGCCAGG
ACCAGGCAAGGAGAAAGGACAACGACCCACTTCAGACGTTCGAGGCCTCG
GAGCTCGGCGCTGACGGCAGCTACGGCGTGCGCGGGCCGGGCGGCGCGCC
CAGGGAAGGAGGAGGACGGCAGAGGAAGCGGATAAAGCGCGCGAGGGGCG
GCGCCAAGCGGCGCCAGGGGCAGGGCCAGGACCAGGCAAGGAGAAAGGAC
AACGACCCACTTCAGACGTTCGAGGCCTCGGAGCTCGGCGCTGACGGCAG
CTACGGCGTGCGCGGGCCGGGCGGCGCGCCCAGGGAAGGAGGAGGA
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