prot_C-linearis_contig93.16921.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig93.16921.1
Unique Nameprot_C-linearis_contig93.16921.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length278
Homology
BLAST of mRNA_C-linearis_contig93.16921.1 vs. uniprot
Match: A0A6H5JSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE)

HSP 1 Score: 414 bits (1064), Expect = 3.130e-144
Identity = 206/256 (80.47%), Postives = 225/256 (87.89%), Query Frame = 0
Query:    1 MDMHQHLPYSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVERFAVSAHEKKEVVSDVDVENPTPRVSGFDMIWAFPLLYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDNAIAVARAFKTAASHAVPNERQLRKREHDTTQFLRDESMKSKDGIN 256
            MDMHQHLPYSMARLACSSF+EGKWAGSEKAFEHAVGQE+ARA LL LWP+LYE AEW GW+EEH +LEIL DDLSEA TT EKD+LTFGMFSKL+AS EFR EVER+A+SA EKKE+V D D EN  PRVSGFDMIW+FPLLYEWACHAI FAPIHQQLVES FST+DTCT+KHDSREID+VRLGQFRS  SRRVQRL A+NKEIR AGD AIAVAR  K +A+HA+PNERQLRKR HDT QFLRD+S KSK G N
Sbjct:    9 MDMHQHLPYSMARLACSSFFEGKWAGSEKAFEHAVGQEYARASLLALWPELYEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIVVDDDAENQAPRVSGFDMIWSFPLLYEWACHAILFAPIHQQLVESDFSTFDTCTQKHDSREIDIVRLGQFRSSHSRRVQRLYATNKEIRQAGDKAIAVARELKKSAAHAIPNERQLRKRTHDTKQFLRDQSEKSKHGSN 264          
BLAST of mRNA_C-linearis_contig93.16921.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE)

HSP 1 Score: 408 bits (1049), Expect = 6.430e-135
Identity = 206/272 (75.74%), Postives = 234/272 (86.03%), Query Frame = 0
Query:    1 MDMHQHLPYSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVERFAVSAHEKKEVVSDVDVENPTPRVSGFDMIWAFPLLYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDNAIAVARAFKTAASHAVPNERQLRKREHDTTQFLRDESMKSKDGINWIVKSVMEEDMLSEES 272
            MDMHQHLPYSMARLACSSF+EGKWAGSEKA EHAVGQE+ARA LL LWP+L E AEW GW+EEH +LEIL DDLSEA TT EKD+LTFGMFSKL+AS EFR EVER+++SA EKKE+V D D E+  PRVSGFDMIW+FPLLYEWA HAI FAPIHQQLV+SV STYDTCT+KHDSREI +VRLGQFRS QSRRVQRL A+NKEIR+AGD  IAVAR  K +A+ A+PN+ QLRKR  DT QFLRD+S KSK G NW+V+SV++E+M SEES
Sbjct:  505 MDMHQHLPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDDDAESQAPRVSGFDMIWSFPLLYEWARHAILFAPIHQQLVKSVCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVARELKKSAAQAIPNDWQLRKRVLDTKQFLRDQSEKSKHGSNWVVRSVLKEEMSSEES 776          
BLAST of mRNA_C-linearis_contig93.16921.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 4.170e-122
Identity = 190/267 (71.16%), Postives = 215/267 (80.52%), Query Frame = 0
Query:   10 SMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVERFAVSAHEKKEVVSDVDVENPTPRVSGFDMIWAFPLLYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDNAIAVARAFKTAASHAVPNERQLRKREHDTTQFLRDESMKSKDGINWIVKSVMEEDMLS-EESEAE 275
            SM RLACSSFYEGKWAGSE+ FEHAVGQE ARALLL  WP+ YE+ EW+GWEE++TF E               +KLT GMFSKL AS EFR+E+ER+A SAHEKK+VVSDVDVEN TPRVSGFDMIW FP LYEWACHA+FFAPIHQQLVES  STYDT T+KHDSRE+D+VRLGQF SR SRRV+RLD+SN+EIRD GD AIAVA   K +ASHAVPNERQLR  EHD  +FL+D+S KSK G  W+VKSVMEE + S EESE+E
Sbjct:  164 SMTRLACSSFYEGKWAGSEEGFEHAVGQEVARALLLAFWPNRYESTEWKGWEEQNTFRE---------------NKLTLGMFSKLAASAEFREELERYAASAHEKKKVVSDVDVENQTPRVSGFDMIWTFPQLYEWACHAVFFAPIHQQLVESSSSTYDTGTQKHDSRELDIVRLGQFSSRGSRRVERLDSSNQEIRDEGDKAIAVATVLKKSASHAVPNERQLRNGEHDWRKFLKDKSEKSKHGSKWVVKSVMEEVLSSSEESESE 415          
BLAST of mRNA_C-linearis_contig93.16921.1 vs. uniprot
Match: D7FXZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ1_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 6.620e-116
Identity = 182/280 (65.00%), Postives = 218/280 (77.86%), Query Frame = 0
Query:    1 MDMHQHLP-YSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVERFAVSAHEKKEVVSD-VDVENPTPRVSGFDMIWAFPLLYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDNAIAVARAFKTAASHAVPNERQLRKREHDTTQFLRDESMKSKDGINWIVKSVMEEDMLSEESEAEINA 278
            MD H   P     +++    YEGKWAG++KA EHAVG+EFARALL+ LWP+  E+AEWR W+EEH  L IL  DLSEA T GEKDKLTFGM+++L+ S EFRKEVE +A SAHEKKEVVSD +DV+NP PRVS F MIW FPLLYEWA HAIF A IH+QLV SVFS YDTCT++HDSREID+VRLGQFRS QSRR+++L ASN EIR+AG+ AIA ARA + AAS AVPNERQ RKR HD TQF+R  + K+K G  W V+SV+  DM   ESE++++A
Sbjct:    1 MDRHASAPPLQHGQVSLQLLYEGKWAGADKANEHAVGKEFARALLVALWPEKNESAEWREWQEEHDILGILEGDLSEATTPGEKDKLTFGMYTELNESAEFRKEVEVYAASAHEKKEVVSDDLDVDNPPPRVSAFGMIWNFPLLYEWARHAIFLAVIHEQLVGSVFSKYDTCTQQHDSREIDIVRLGQFRSAQSRRIRKLHASNHEIREAGNKAIAEARALRKAASEAVPNERQQRKRGHDVTQFVRTATNKAKYGPGWQVRSVL--DMSESESESDVSA 278          
BLAST of mRNA_C-linearis_contig93.16921.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 5.900e-42
Identity = 95/237 (40.08%), Postives = 131/237 (55.27%), Query Frame = 0
Query:    1 MDMHQHLPYSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVERFAVSAHEKKEVVSDVDVENPTPR-VSGFDMIWAFPLLYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDNAIAVARAFKTAASHAVPNERQLRKR 236
            M+ HQ LP SMAR+ C SF+       E A E AVG EFARA L V W  LYE       E E  +   L  DL        KD+LTFG+FS++D+    R E+E++A S         D +V+   P+  S    ++ FPLLY+  CH  +F PIHQQL+E+ FS +D+C +K D  E+D+VR+G ++S +SR +   DA+ ++IR AG   +  AR  K  +    P E   RKR
Sbjct:  234 MERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEP--RTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGW------GDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKR 462          
BLAST of mRNA_C-linearis_contig93.16921.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 2.680e-38
Identity = 90/230 (39.13%), Postives = 120/230 (52.17%), Query Frame = 0
Query:    1 MDMHQHLPYSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVERFAVSAHEKKEVVSDVDVENPTPR-VSGFDMIWAFPLLYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDNAIAVARAFKTAASHAVPN 229
            M  HQ LP SMAR+ C SFY         A E AVG EFARA   V WP LYE       E E  +   L  DL        KD+LT G+FS +D     R E+E++A S         D +++   P+  S    ++  PLLY   CH  +F PIHQQL+E+ FS YD+C KK D  E+D+VR+G ++S +SR +  +DA + +IR AG   +  A   K  +    PN
Sbjct:  235 MQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEP--RTERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGW------GDKEIDESAPKGTSALARLFDLPLLYRLVCHRFYFVPIHQQLIEAFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATEAKAISHARKPN 456          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig93.16921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JSZ3_9PHAE3.130e-14480.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU73_9PHAE6.430e-13575.74Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN38_9PHAE4.170e-12271.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXZ1_ECTSI6.620e-11665.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FIQ1_ECTSI5.900e-4240.08Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JI13_9PHAE2.680e-3839.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig93contigC-linearis_contig93:470296..471129 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig93.16921.1mRNA_C-linearis_contig93.16921.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig93 470296..471133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig93.16921.1 ID=prot_C-linearis_contig93.16921.1|Name=mRNA_C-linearis_contig93.16921.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=278bp
MDMHQHLPYSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPD
LYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEF
RKEVERFAVSAHEKKEVVSDVDVENPTPRVSGFDMIWAFPLLYEWACHAI
FFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDA
SNKEIRDAGDNAIAVARAFKTAASHAVPNERQLRKREHDTTQFLRDESMK
SKDGINWIVKSVMEEDMLSEESEAEINA
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