prot_C-linearis_contig9.16645.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16645.1
Unique Nameprot_C-linearis_contig9.16645.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length332
Homology
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Match: D7G0P9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0P9_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 1.030e-107
Identity = 203/326 (62.27%), Postives = 229/326 (70.25%), Query Frame = 0
Query:    1 MKVIGSSIIAALAQRKSTLINAGVGFSTFAVGDAISQGARPQPQVLLDERRRRQRQQLAKTSGGQQFVGELRQRTRGVDLARSAKVGLLGIFLNGFALGAWYRVLDRYIGSDRTRIQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGPANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQVAWQAYMSSVSYDNPSPTK-------ATIKAGNS-----------GGVFVRGGGGGGRAGVGATDGVAANGTGGDGVRTGGGEGITPSPGLPVAVAAIEG-GTARRAVMVDRRSTGRYAYNSTSSS 307
            MKV GSS IAALA R+STLIN  VGFSTFAVGDA+SQGARPQ Q+++  RRR+   Q  + S  QQF+     RTR VD ARSAKVGLLGI LNGFALGAWYRVLDRYIGSDRTR QQ+LKK+VVDQ VYAPFSITSFVGYAAVLNGGGPA V+  TK +L +     W+ DWKVWPAAN++MFRFIPSSYRPSFAS+VQVAWQAY+SSVSYD+P           ATI+AG +               VRGG  G      A   VAA        +TGGG+   PSPG+PV   AI G GT R  V VDRR+TGRYAY S+ SS
Sbjct:    1 MKVFGSSFIAALANRRSTLINGAVGFSTFAVGDALSQGARPQSQLVVAGRRRQH--QSEEPSWQQQFID----RTRRVDYARSAKVGLLGIMLNGFALGAWYRVLDRYIGSDRTRFQQILKKLVVDQMVYAPFSITSFVGYAAVLNGGGPAKVVDETKKNLGETFWSIWLTDWKVWPAANLVMFRFIPSSYRPSFASMVQVAWQAYLSSVSYDSPHXXXXXXXTQVATIQAGIAMEAXXXXXXXXXXXLVRGGEAGKDLAGKAAAAVAAV------AKTGGGDESVPSPGVPVGSNAIAGAGTPR--VAVDRRATGRYAYTSSVSS 312          
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Match: A7RSR7_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RSR7_NEMVE)

HSP 1 Score: 84.3 bits (207), Expect = 8.510e-16
Identity = 48/144 (33.33%), Postives = 74/144 (51.39%), Query Frame = 0
Query:   79 DLARSAKVGLLGIFLNGFALGAWYRVLDRYIGSDRTRIQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGPANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQVAWQAYMSSVSYDNPSPTKATI 222
            D+ R+ K+G +G+F+ G  +  WY  LD+ + + R      LKKV +DQ ++AP  I  F G    ++G      L   K  L +H L T I ++K+WPA  ++ F  IP SYR  F     V W  Y+  ++ + PS T   +
Sbjct:   47 DVKRTLKMGAVGLFV-GPIIRTWYLTLDKLVVASRRPKLDALKKVFLDQSLFAPCFIAVFFGIKCTVSG----QTLDEYKQVLREHYLNTLIANYKLWPAVQIVTFSIIPFSYRVLFVQCFAVFWNTYLCWMA-NRPSETNTEL 184          
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Match: A0A6B2LKY0_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LKY0_9EUKA)

HSP 1 Score: 82.8 bits (203), Expect = 1.590e-15
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = 0
Query:   76 RGVDLARSAKVGLLGIFLNGFALGAWYRVLDRYIGSDRTR----IQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGPANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQVAWQAYMS 208
            RG +  R AK+ + G  L+G     WYR+LD+ I + R+          KK+++DQ V+APF + +F+   AVL+G        N K  L    L T  +++ +WPAA  I FRF+PS +R  + SLV V W   +S
Sbjct:   13 RGFEWTRCAKMCIYGAVLSGPLNHYWYRLLDQRITAGRSLGWLGHSMDYKKLLLDQVVFAPFIVGAFLASMAVLDGK-----YKNIKEKLESDFLPTLKLNYYLWPAAQFINFRFVPSHHRVGYVSLVIVGWSCLLS 144          
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Match: A0A6A5BU89_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BU89_NAEFO)

HSP 1 Score: 82.8 bits (203), Expect = 4.540e-15
Identity = 41/144 (28.47%), Postives = 73/144 (50.69%), Query Frame = 0
Query:   78 VDLARSAKVGLLGIFLNGFALGAWYRVLDRYIG---------SDRTRIQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGPANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQVAWQAYMSSVSY 212
            +D  R+ K+   GI + G  L  WY+ LDR++          S+  R     ++++VDQ ++APF++  F+ Y   + G    ++    K  +      T +++W +WPAA ++ F  +P  YR  F + V + W AY+S V +
Sbjct:   61 LDWVRTLKMASFGIIMIGPTLHLWYKFLDRFVAKKYPVGYVLSNTERTLNAARQMLVDQTLFAPFALFQFLAYMGAIEGKSFDSIAEKMKHDM----WPTLVVNWYIWPAAQMLNFTLVPLQYRVLFVNSVAILWNAYLSHVQH 200          
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Match: A0A8K0C493_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0C493_9COLE)

HSP 1 Score: 82.4 bits (202), Expect = 4.880e-15
Identity = 48/131 (36.64%), Postives = 70/131 (53.44%), Query Frame = 0
Query:   78 VDLARSAKVGLLGIFLNGFALGAWYRVLDRYIGSDRTRIQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGPANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQVAWQAYMS 208
            V+L R+A+   +G+FL G AL  WYRVL +  G D+     VLKKV +DQFV+AP  I  F+    V+ G  P   +A  K + +D      I ++K+WP   +  F  +P  Y+     LV + W  Y+S
Sbjct:   47 VNLKRTAQFASVGLFLAGPALTTWYRVLAKTFG-DKGHTSVVLKKVALDQFVFAPAFIGVFLTALGVVQGKDPQVTVAEVKKNYLD----VVISNYKLWPWVQLGNFYLVPLRYQVLVVQLVAILWNTYLS 172          
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Match: L7LZH6_RHIPC (Uncharacterized protein n=2 Tax=Rhipicephalus TaxID=426455 RepID=L7LZH6_RHIPC)

HSP 1 Score: 81.6 bits (200), Expect = 6.410e-15
Identity = 47/130 (36.15%), Postives = 70/130 (53.85%), Query Frame = 0
Query:   78 VDLARSAKVGLLGIFLNGFALGAWYRVLDRYIGSDRTRIQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGPANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQVAWQAYM 207
            +D+ R+A+  ++G+   G AL  WY  L+R +GS   R   V+KKV +DQ V+ P  + SF+    V  G        + K +L    L     ++ +WPAA +I FRF+P SYR  FAS V + W  Y+
Sbjct:   45 IDVPRAARFFIMGVAFVGPALRVWYLALERIVGSSGGRAM-VVKKVFLDQAVFTPVFLPSFL----VTLGALQQRSWGSIKDTLRADYLPILKANYMLWPAAQLINFRFVPLSYRVPFASCVALVWNTYL 169          
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Match: UPI0018893730 (protein Mpv17-like n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI0018893730)

HSP 1 Score: 81.3 bits (199), Expect = 7.550e-15
Identity = 45/130 (34.62%), Postives = 71/130 (54.62%), Query Frame = 0
Query:   78 VDLARSAKVGLLGIFLNGFALGAWYRVLDRYIGSDRTRIQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGPANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQVAWQAYM 207
            VD+ R+A+  L+G    G  +  W+  L+R++GS       V +KV++DQ ++AP  I SF+    V+ G        + + SL  + L+     + +WPAA ++ FRF+P SYRP FA  V V W  Y+
Sbjct:   24 VDVVRAARFFLMGAGFAGPVIRIWHLTLERFVGSGVGAFV-VARKVMIDQALFAPVFIASFL----VVLGAFKRRSWHDIEQSLRTNYLQILKTSYVIWPAAQLVNFRFVPLSYRPPFAGCVAVVWSTYL 148          
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Match: A0A8B7Y6M9_ACAPL (protein Mpv17-like isoform X3 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y6M9_ACAPL)

HSP 1 Score: 81.6 bits (200), Expect = 8.720e-15
Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 0
Query:   79 DLARSAKVGLLGIFLNGFALGAWYRVLDRYIGSDRTRIQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGPANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQVAWQAYMS 208
            D+ R+ +    G+ + G  L AWYR LD+ I    T + + LK V VDQ V  P  +T F     + +G  PA V+   K ++      T I ++K+WPAA VI F F+P  +R   A+ V + W  Y+S
Sbjct:   48 DVIRTVRQASFGLVIGGPLLFAWYRTLDKVIKG--TGVIKALKSVAVDQMVMPPIFLTLFYSAIGLTSGLSPAEVVDKLKQNMK----PTLITNYKIWPAAQVINFYFVPLQHRVLTANFVALFWNIYLS 171          
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Match: A0A6P8HN46_ACTTE (protein Mpv17-like isoform X2 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HN46_ACTTE)

HSP 1 Score: 81.6 bits (200), Expect = 8.720e-15
Identity = 43/130 (33.08%), Postives = 76/130 (58.46%), Query Frame = 0
Query:   79 DLARSAKVGLLGIFLNGFALGAWYRVLDRYI-GSDRTRIQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGPANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQVAWQAYM 207
            D+ R+ ++G++G+ L G  L AWY  LD+ +  S R ++   LKK+++DQ ++AP  I  F   + +L+G       +  K +L +  +ET I ++K+WPAA ++ F F+P  +R  F  +V + W  Y+
Sbjct:   42 DVTRTVRMGVVGLCL-GPILRAWYLTLDKVVVASSRPKLDG-LKKMLLDQALFAPVCIGFFYCVSEMLSG----KTFSQCKETLKERYVETLIANYKLWPAAQIVNFTFVPLEHRVGFVQIVAIFWNTYL 165          
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Match: A0A6P8HUY4_ACTTE (protein Mpv17-like isoform X1 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HUY4_ACTTE)

HSP 1 Score: 81.6 bits (200), Expect = 9.890e-15
Identity = 43/130 (33.08%), Postives = 76/130 (58.46%), Query Frame = 0
Query:   79 DLARSAKVGLLGIFLNGFALGAWYRVLDRYI-GSDRTRIQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGPANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQVAWQAYM 207
            D+ R+ ++G++G+ L G  L AWY  LD+ +  S R ++   LKK+++DQ ++AP  I  F   + +L+G       +  K +L +  +ET I ++K+WPAA ++ F F+P  +R  F  +V + W  Y+
Sbjct:   48 DVTRTVRMGVVGLCL-GPILRAWYLTLDKVVVASSRPKLDG-LKKMLLDQALFAPVCIGFFYCVSEMLSG----KTFSQCKETLKERYVETLIANYKLWPAAQIVNFTFVPLEHRVGFVQIVAIFWNTYL 171          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0P9_ECTSI1.030e-10762.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A7RSR7_NEMVE8.510e-1633.33Predicted protein n=2 Tax=Nematostella vectensis T... [more]
A0A6B2LKY0_9EUKA1.590e-1536.50Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A6A5BU89_NAEFO4.540e-1528.47Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]
A0A8K0C493_9COLE4.880e-1536.64Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
L7LZH6_RHIPC6.410e-1536.15Uncharacterized protein n=2 Tax=Rhipicephalus TaxI... [more]
UPI00188937307.550e-1534.62protein Mpv17-like n=1 Tax=Rhipicephalus microplus... [more]
A0A8B7Y6M9_ACAPL8.720e-1535.38protein Mpv17-like isoform X3 n=1 Tax=Acanthaster ... [more]
A0A6P8HN46_ACTTE8.720e-1533.08protein Mpv17-like isoform X2 n=1 Tax=Actinia tene... [more]
A0A6P8HUY4_ACTTE9.890e-1533.08protein Mpv17-like isoform X1 n=1 Tax=Actinia tene... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 161..208
e-value: 9.7E-14
score: 51.4
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 27..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..85
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2313766..2319710 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16645.1mRNA_C-linearis_contig9.16645.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 2313627..2319710 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16645.1 ID=prot_C-linearis_contig9.16645.1|Name=mRNA_C-linearis_contig9.16645.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=332bp
MKVIGSSIIAALAQRKSTLINAGVGFSTFAVGDAISQGARPQPQVLLDER
RRRQRQQLAKTSGGQQFVGELRQRTRGVDLARSAKVGLLGIFLNGFALGA
WYRVLDRYIGSDRTRIQQVLKKVVVDQFVYAPFSITSFVGYAAVLNGGGP
ANVLANTKSSLVDHGLETWIMDWKVWPAANVIMFRFIPSSYRPSFASLVQ
VAWQAYMSSVSYDNPSPTKATIKAGNSGGVFVRGGGGGGRAGVGATDGVA
ANGTGGDGVRTGGGEGITPSPGLPVAVAAIEGGTARRAVMVDRRSTGRYA
YNSTSSSAGTARDGGAGSSSGALKDDGSVSGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22