mRNA_C-linearis_contig89.16428.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig89.16428.1
Unique NamemRNA_C-linearis_contig89.16428.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig89.16428.1 vs. uniprot
Match: D7FVB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB0_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.680e-41
Identity = 119/273 (43.59%), Postives = 154/273 (56.41%), Query Frame = 1 
Query:   85 SIGGTAIKDMKVSMLRSHIDRMGLEASGRLKHDLQQCLCDAVRSGKGRHSQA--HTPKRTAGKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAGEPGDQ-PRRGRARRAAQAGGKGAGGPASGRGNRSP-----PDPADKSPVPVLPPGKVLFHNRAVSAMGHDEMKEALQDLDVASFRKDDEELTHDLIDALVLRKAEAAERDPKKQAWRGRLVHKMRKSELADMLEDFELDDTGRAEEMRTRFRAALRKWAADKIKLPAAGPG 879
            S+ G  + DMKV+ L+ H++RMGL+A+G LK DLQ+CL DA+  G   HS    H P++T G                                    +  G+  D+ PRRGR       GG+ AG   S   + SP         D S  P  PP +V FH   VSAM  +EM+E L +LD+ S R  D+E+THDLIDALV RKAEAA+ +P+KQAW GR V+ MRK+ELADML  F+LDD G+ + +R RFR  LRKWAAD+I  PA+G G
Sbjct:  370 SVDGVRVADMKVATLKLHVERMGLKATGHLKADLQRCLRDAILDG---HSGGGGHAPRKTGGGVRVPVGTDKDGS-----------------------ESGGDVADEKPRRGR-------GGRSAGRDLSAAPSLSPLRRKRAGQVDPSQAPAFPPDQVWFHQTRVSAMNLEEMREKLHELDMPSLRLKDDEVTHDLIDALVQRKAEAADSNPRKQAWLGRPVYMMRKAELADMLRHFDLDDAGKVDVLRGRFRDELRKWAADEIAHPASGAG 609
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BLAST of mRNA_C-linearis_contig89.16428.1 vs. uniprot
Match: A0A6H5L7J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J5_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.550e-40
Identity = 117/269 (43.49%), Postives = 150/269 (55.76%), Query Frame = 1 
Query:   85 SIGGTAIKDMKVSMLRSHIDRMGLEASGRLKHDLQQCLCDAV---RSGKGRHSQAHTPKRTAGKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAGEPGD-QPRRGRARRAAQAGGKGAGGPASGRGNRSPPDPADKSPVPVLPPGKVLFHNRAVSAMGHDEMKEALQDLDVASFRKDDEELTHDLIDALVLRKAEAAERDPKKQAWRGRLVHKMRKSELADMLEDFELDDTGRAEEMRTRFRAALRKWAADKIKLPAAGPG 879
            S+ G  + DMKV+ LR H++RMGL+A+G LK DLQ+CL DA+    SG G H+   T +R  G                                       G+  D +PRRGR  R    G      P++    R      D SP P   P +V FH   VSAM  +EM+E L +LD+ S R  D+E+THDLIDALV RKAEAA+ +P+KQAW GR V+ MRK+ELADML  F LDD G+ + +R RFR ALRKWAA++I  PA+G G
Sbjct:  460 SVDGVRVADMKVATLRLHVERMGLKATGHLKADLQRCLRDALLDGHSGGGGHAPRKTGRRVRG---------------------------------------GDEADAKPRRGRGGR--PVGRDPPAAPSASPLRRKRAGQVDPSPAPAFHPDQVWFHQTRVSAMNLEEMREKLHELDMPSLRLKDDEVTHDLIDALVQRKAEAADSNPRKQAWLGRPVYMMRKAELADMLRHFNLDDAGKVDVLRGRFRDALRKWAAEEIAHPASGGG 687
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVB0_ECTSI1.680e-4143.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7J5_9PHAE1.550e-4043.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:584061..589131 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score184.5
Seed ortholog evalue2.7e-43
Seed eggNOG ortholog2880.D7FVB0
KEGG koko:K15304,ko:K17302,ko:K20282
KEGG Pathwayko05166,map05166
Hectar predicted targeting categoryother localisation
GOsGO:0000054,GO:0000056,GO:0000082,GO:0000226,GO:0000278,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006403,GO:0006405,GO:0006508,GO:0006511,GO:0006606,GO:0006611,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0008104,GO:0008150,GO:0008152,GO:0008536,GO:0009056,GO:0009057,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0017016,GO:0017038,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0022402,GO:0022613,GO:0030163,GO:0031267,GO:0031323,GO:0031326,GO:0031503,GO:0031935,GO:0031938,GO:0033036,GO:0033043,GO:0033044,GO:0033365,GO:0033750,GO:0034504,GO:0034613,GO:0042254,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045184,GO:0046907,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051020,GO:0051128,GO:0051168,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051234,GO:0051236,GO:0051252,GO:0051603,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0060968,GO:0065007,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:1901564,GO:1901565,GO:1901575,GO:1902275,GO:1903047,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.Ran GTPase binding
EggNOG OGsCOG5171@1,KOG0864@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147
Exons5
Model size3368
Cds size3366
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16428.1prot_C-linearis_contig89.16428.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig89 584061..589131 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930689.5231993-CDS-C-linearis_contig89:584060..5844471622930689.5231993-CDS-C-linearis_contig89:584060..584447Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 584061..584447 -
1690881198.337255-CDS-C-linearis_contig89:584060..5844471690881198.337255-CDS-C-linearis_contig89:584060..584447Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 584061..584447 -
1622930689.5386841-CDS-C-linearis_contig89:585019..5856161622930689.5386841-CDS-C-linearis_contig89:585019..585616Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 585020..585616 -
1690881198.3561049-CDS-C-linearis_contig89:585019..5856161690881198.3561049-CDS-C-linearis_contig89:585019..585616Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 585020..585616 -
1622930689.5535188-CDS-C-linearis_contig89:585625..5866681622930689.5535188-CDS-C-linearis_contig89:585625..586668Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 585626..586668 -
1690881198.3663208-CDS-C-linearis_contig89:585625..5866681690881198.3663208-CDS-C-linearis_contig89:585625..586668Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 585626..586668 -
1622930689.5684562-CDS-C-linearis_contig89:587086..5883081622930689.5684562-CDS-C-linearis_contig89:587086..588308Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 587087..588308 -
1690881198.3752506-CDS-C-linearis_contig89:587086..5883081690881198.3752506-CDS-C-linearis_contig89:587086..588308Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 587087..588308 -
1622930689.5858324-CDS-C-linearis_contig89:589014..5891311622930689.5858324-CDS-C-linearis_contig89:589014..589131Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 589015..589131 -
1690881198.3874514-CDS-C-linearis_contig89:589014..5891311690881198.3874514-CDS-C-linearis_contig89:589014..589131Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 589015..589131 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig89.16428.1

>prot_C-linearis_contig89.16428.1 ID=prot_C-linearis_contig89.16428.1|Name=mRNA_C-linearis_contig89.16428.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1122bp
GEKAGAGAGGGRRGRARTPVPAEAPISLSIGGTAIKDMKVSMLRSHIDRM
GLEASGRLKHDLQQCLCDAVRSGKGRHSQAHTPKRTAGKAAAAAAAAAAA
AATAAAKKKVGGSGDSDGDGDENEDDAGEPGDQPRRGRARRAAQAGGKGA
GGPASGRGNRSPPDPADKSPVPVLPPGKVLFHNRAVSAMGHDEMKEALQD
LDVASFRKDDEELTHDLIDALVLRKAEAAERDPKKQAWRGRLVHKMRKSE
LADMLEDFELDDTGRAEEMRTRFRAALRKWAADKIKLPAAGPGRSGSGRS
SGGGGSASTGGATTGGPSEPEDEEDAGSDVDESSATDGAGRGARRGWQAR
TRRSDDAAATASSRSTASRASRKSPAKKPAAEKSRSASASAASRRGRGRS
SKSSAGGVKGPAKTRATKPGRSRLRDKESAVSPKRAASPKTKRKAAGAGS
TRSGRSKAPAAAAAKTKAKAKANPSRGTSRTKRAAATARGGRKAGEDSDS
ESDEDEDGDAGETPAPGASAAKGKGKAKAKGAAGKGKGKAKAKPESGKGK
KAVSTRSKAAAQESASKGEGAEGDQSSSSADEEEEEEEEEEEEEGSRRGG
AGRRRGDRSSASAPPGASSSERKAGGGKDAQPKAAEAPSGSPKKPTKSAG
GAPGNDDDGGDGDDHEDVGKRRGARGGAGRGGGKGIGNAGGGGGDGSSSS
DGDGGGEGSDDEKASQPEEEEEERAEDEDEDENKDTDENEDDDGDEEKGD
GGQAEDAEQEAGVEATEGQGAGAAPAAAPAAPAAAAAAAAAAVAPTSGAG
PAADPEAETNFARDGAVQIEAEAGARAMEVDGAVAAGATGDGGDASVGVG
PAGALPAGDGEGGTVNEDEDGGGGNGVQLMRLEEDEVAGGADGPENGDGD
GDGDGDGSDRDAAAAAAEEDGDDDDTVEKAVEEGDTEEEVDGGQEEEDAA
AGAVGVPAGAGDGDDPMDEDEELGEADLEESGREGLAEDDEHKDEGADMD
QEVELAALNPEDANADLDAEPDANLDADADQGGSSTDLENQTDDGGAVAL
APQLGDGDDDGDDVCPAAGPQERSLADEGLDGIDASGLGGQGGAVSGDPS
QHEEEDGDWDDGVVALDGRSSG
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mRNA from alignment at C-linearis_contig89:584061..589131-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig89.16428.1 ID=mRNA_C-linearis_contig89.16428.1|Name=mRNA_C-linearis_contig89.16428.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5071bp|location=Sequence derived from alignment at C-linearis_contig89:584061..589131- (Chordaria linearis ClinC8C monoicous)
GGGGAGAAGGCAGGGGCCGGAGCAGGAGGGGGAAGACGAGGGAGAGCAAG
GACACCTGTCCCGGCAGAAGCTCCGATCTCGCTGTCGATTGGAGGGACAG
CCATCAAGGACATGAAGGTGATAGTCGCGCTCTCTACCCCTACCCCCCCT
CTTTCGGTCTGCTTCCACCAGCCCGTGCTGCCCCTCGGGGTCGGATGTTG
TACTTGTTCTCGTGACATCATGACACAGCGGGTGTAACGTGATTGCTGCC
TCTTCTTTTCACGTCCCGCCGGTTACTGCTTTTGTTTGTGTTTTGACAGC
TGCAGCAGTAGTAGCGGTAGGTGGTGTGTGCGTGTGTGCCAGGCATTAAT
TTTTTATGTTTCTACCAGTACATCATAGCGCGGGTGTTGACCATTTTACG
CCTTGGGTCAGGGTTATGGGCTAGAGGCTGACGGGCTCGCTCTCTGTCTT
CGACGAATACACATATGGAGTCGCTCGAGTGCCGCTTCGATAAACAGCAT
AAGGCATGTGTACCAGGCATGTTTACCAGGCCGAAACCGTTTTAAGCGTT
TCGTTCAGTAAGCGGATCACAAAACACTTTGACGTGTTGAGACAACCTTG
GCCATTTTCAAGAGTCTCGATAGCCTCTGCCGCAAATGAGATTGCGCGTA
CGTATTCCGTGTGGGTGCTTCTACGGTAGAGTACCGGCCCATGCATCAAG
GTCGGGACAATGCTGCCCGTCTCTCGTCTGTGTTAAAATATCTAGTTTCG
CCCCCCCCGCCGGCCTCTCCTTTTTGTGTGCCATCCCGCGAAACGACCCA
CCACCCTCCTATCATTCCTACAGGTGAGCATGCTGAGGTCCCACATCGAC
CGCATGGGCCTCGAGGCCTCGGGGCGCCTCAAGCACGACCTCCAGCAGTG
CCTCTGCGATGCCGTGCGCTCCGGCAAAGGCCGGCACTCTCAAGCTCACA
CTCCCAAGCGGACGGCTGGAAAGGCCGCTGCCGCGGCCGCTGCCGCTGCC
GCTGCCGCTGCCACCGCCGCGGCCAAGAAGAAAGTCGGCGGGAGCGGCGA
CAGCGACGGAGACGGAGACGAAAATGAGGACGACGCCGGCGAGCCCGGCG
ACCAACCTCGAAGGGGCCGGGCAAGGCGTGCAGCGCAGGCGGGCGGGAAA
GGGGCAGGGGGGCCCGCGAGCGGGAGGGGAAATCGGTCCCCCCCCGACCC
GGCGGACAAGTCCCCCGTGCCCGTGCTTCCACCCGGCAAGGTTCTGTTTC
ACAACAGAGCGGTCTCGGCCATGGGCCACGACGAGATGAAGGAGGCCCTA
CAGGACCTAGACGTGGCTTCCTTCCGCAAGGACGACGAAGAGCTGACGCA
CGACCTCATCGACGCCCTGGTGCTGCGCAAGGCGGAGGCGGCCGAGCGGG
ACCCGAAGAAGCAGGCGTGGCGCGGGCGGCTCGTGCACAAGATGAGGAAG
TCCGAGCTCGCCGACATGCTGGAAGACTTCGAGCTCGACGACACCGGGAG
GGCGGAGGAGATGCGCACCCGCTTCCGCGCGGCGCTTCGCAAGTGGGCGG
CAGACAAGATCAAGCTGCCTGCCGCGGGTCCCGGGCGCAGTGGCAGCGGC
CGCAGCAGTGGCGGCGGAGGCAGCGCTAGCACGGGCGGAGCAACAACCGG
CGGACCATCGGAGCCAGAGGACGAAGAGGACGCCGGTTCGGACGTTGACG
AGTCTAGTGCTACGGACGGCGCAGGCCGCGGCGCGCGTCGGGGTTGGCAG
GCCCGTACCCGCCGATCGGATGACGCCGCCGCTACCGCTTCCTCCCGCTC
GACGGCGTCGAGAGCCTCGCGGAAGAGCCCCGCCAAGAAGCCGGCGGCGG
AGAAGTCAAGGTCAGCTTCGGCGTCTGCGGCGTCTCGCCGTGGTCGAGGG
CGCAGCAGCAAGAGCTCGGCCGGCGGCGTGAAGGGACCGGCGAAGACCCG
TGCCACGAAGCCTGGGCGAAGCCGGTTGAGGGACAAGGAATCGGCGGTGT
CCCCCAAGAGAGCCGCGTCTCCCAAGACCAAGAGAAAGGCTGCCGGTGAG
AGGGTCTTGCTTGCTTGTTTGCTTGTGTCGTCGGACCCGGTAGGTTTTTG
TTTGCAGCCAGCCGTGACTTGTCTGCTCAACCTCGAATGCTTGGTCAGAA
TCGCAGCGTGGTGCTTTTGGATTATAAACGGTTTTGTACGTGAATTATAT
TGTGGCTGCCGTGTAGCTGGGGTGTTCATCAGAGGATGCAGATAGGATTT
ATAGCGGCATAGACAGCGTGCGACAGCTGCACGCCCTTGGAGCTTATCGC
CGTGTCCCTGCCCCGTACGTTGGAAGCCCGTTATAGTGTAACGTGAAGGT
TTTCCCTTGGGCCAATCTCGAGCCATTTCAAGATCTCAGCTCGTGCCGTG
CTCCTCTCAATCCTGTACTGTACTACTGTACTGTACGGCGTTTGTGTGGC
GTTTTGATCTCAGGCGCTGGGAGCACGAGGTCCGGAAGATCGAAGGCACC
TGCTGCTGCTGCTGCAAAGACGAAGGCAAAGGCAAAGGCTAATCCGTCTC
GTGGCACCTCCCGTACGAAGCGTGCCGCCGCCACTGCTCGCGGTGGGAGG
AAGGCGGGCGAGGACAGCGACAGCGAAAGCGATGAGGATGAGGATGGGGA
TGCTGGGGAAACCCCGGCCCCTGGTGCATCCGCAGCAAAGGGCAAGGGTA
AAGCGAAGGCAAAGGGCGCTGCTGGGAAGGGGAAGGGGAAGGCGAAGGCG
AAGCCGGAAAGCGGCAAGGGCAAGAAGGCAGTCTCGACCCGGTCCAAGGC
TGCTGCCCAAGAGAGCGCCTCCAAAGGCGAAGGCGCGGAGGGAGACCAAA
GTTCTAGCTCTGCGGACGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG
GAAGAAGGATCCCGCCGAGGAGGGGCCGGACGGCGGCGTGGAGACCGCTC
CTCCGCCTCGGCCCCCCCGGGCGCTTCTTCCTCCGAGCGCAAGGCCGGCG
GCGGAAAAGACGCCCAGCCGAAGGCCGCCGAAGCCCCCTCGGGCAGTCCC
AAGAAGCCCACGAAGAGCGCAGGCGGGGCCCCAGGAAACGACGACGACGG
CGGAGACGGCGATGACCATGAGGACGTAGGAAAGCGGCGGGGTGCCAGGG
GAGGGGCCGGCCGCGGCGGCGGGAAGGGGATCGGGAACGCCGGTGGCGGT
GGCGGCGATGGAAGCTCCAGCTCCGATGGGGACGGAGGTGGGGAGGGTTC
GGATGACGAGAAGGCCTCTCAGCCGGAAGAGGAAGAGGAAGAGCGGGCAG
AGGATGAGGATGAGGATGAGAATAAAGATACAGACGAAAACGAAGACGAT
GATGGCGACGAGGAAAAGGGTGACGGCGGTCAAGCGGAGGACGCGGAGCA
AGAGGCGGGCGTAGAAGCAACGGAGGGACAGGGCGCCGGTGCTGCTCCTG
CTGCTGCTCCTGCTGCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GTCGCGGTTGCCCAGCCAACCTCTGGGGCCGGTCCCGCTGCCGACCCGGA
AGCAGAGACTAACTTCGCTCGAGACGGCGCGGTTCAAATCGAGGCCGAGG
CCGGTGCGCGAGCCATGGAAGTCGACGGTGCGGTAGCTGCTGGTGCTACC
GGTGACGGCGGCGATGCTAGTGTCGGTGTCGGTCCCGCCGGGGCTCTACC
GGCGGGTGATGGCGAAGGCGGCACCGTGAATGAAGATGAAGATGGAGGTG
GGGGGAACGGGGTGCAATTGATGCGTCTGGAGGAGGATGAGGTGGCAGGA
GGCGCCGATGGCCCAGAGAATGGCGATGGCGATGGCGATGGCGATGGCGA
TGGCTCCGACCGGGATGCGGCAGCGGCGGCGGCAGAAGAGGACGGGGACG
ACGACGATACCGTGGAGAAAGCCGTGGAGGAAGGAGACACCGAAGAAGAG
GTGGACGGAGGTCAGGAGGAAGAGGACGCTGCTGCTGGTGCGGTAGGCGT
GCCTGCTGGTGCTGGCGATGGCGATGACCCCATGGACGAAGATGAAGAGC
TGGGAGAAGCGGACCTGGAGGAAAGCGGAAGGGAGGGCTTAGCAGAAGAC
GATGAGCACAAGGTGAGAATATCATTGGATGGTACCTGGTATTAGTTTCG
GTCAGACCCAAACCGAGATACGCAGTGGCTTTTACCGTTCTGGGATATCG
GCCGCGTTCCTTTTACTTTTATCTCCGCCAGTGCGTTCTGTTGTTTGATG
GCTAAATATCGGTGCCTCGAACTGGAGCAAGAATAAGTTTGATGTCATTG
ATTGTGAAACGCCGTAATCTTCCCTGCCGCTCCTGTCGCCTGTCGCTGTC
AACGGCAAAGGCTTTCTTTTTCGGGTTCGTCCTTGTGCTGCACGGTACGG
TAGTACAGAGGGGACAGCAGTTTCGTATCCAAGGCGTGCGGGCCCTCAAA
AGCGTCGCAGGACTCCACGTTCAGCAGTAATGCCAGCGTTCATGTAGTGC
GTATTTTCGTGTGGGTGATAACTGTAATAGCCACAACGAGCAAAGCAAGA
AACAAGCCTTATCGTGTGCTGACCTTGCCGCACCGCACCGCCAGTGTTTC
TCTCTTTCGCCCCAAGATACGCTCTTATCACGCTTACTGCTGTAAATTAT
ATTGATCTCGACATTGCATTTATCTCGCCAACAGGATGAAGGAGCAGACA
TGGACCAAGAGGTCGAGCTCGCCGCCCTCAACCCCGAAGATGCAAACGCC
GACCTCGACGCAGAGCCAGACGCAAACCTCGACGCGGATGCCGACCAAGG
AGGCAGCAGCACGGACTTGGAGAACCAGACAGACGACGGCGGCGCGGTGG
CCCTTGCCCCCCAGCTCGGCGATGGCGATGACGATGGCGACGATGTTTGT
CCGGCGGCAGGTCCCCAAGAGCGTTCCTTGGCAGATGAGGGGCTCGATGG
AATAGATGCTTCAGGGTTGGGGGGGCAGGGGGGCGCTGTTTCGGGAGACC
CGTCTCAGCACGAGGAAGAGGATGGAGATTGGGATGATGGAGTGGTGGCG
TTGGATGGCCGCTCTAGTGGT
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Coding sequence (CDS) from alignment at C-linearis_contig89:584061..589131-

>mRNA_C-linearis_contig89.16428.1 ID=mRNA_C-linearis_contig89.16428.1|Name=mRNA_C-linearis_contig89.16428.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6732bp|location=Sequence derived from alignment at C-linearis_contig89:584061..589131- (Chordaria linearis ClinC8C monoicous)
GGGGAGAAGGCAGGGGCCGGAGCAGGAGGGGGAAGACGAGGGAGAGCAAG
GACACCTGTCCCGGCAGAAGCTCCGATCTCGCTGTCGATTGGAGGGACAG
CCATCAAGGACATGAAGGGGGAGAAGGCAGGGGCCGGAGCAGGAGGGGGA
AGACGAGGGAGAGCAAGGACACCTGTCCCGGCAGAAGCTCCGATCTCGCT
GTCGATTGGAGGGACAGCCATCAAGGACATGAAGGTGAGCATGCTGAGGT
CCCACATCGACCGCATGGGCCTCGAGGCCTCGGGGCGCCTCAAGCACGAC
CTCCAGCAGTGCCTCTGCGATGCCGTGCGCTCCGGCAAAGGCCGGCACTC
TCAAGCTCACACTCCCAAGCGGACGGCTGGAAAGGCCGCTGCCGCGGCCG
CTGCCGCTGCCGCTGCCGCTGCCACCGCCGCGGCCAAGAAGAAAGTCGGC
GGGAGCGGCGACAGCGACGGAGACGGAGACGAAAATGAGGACGACGCCGG
CGAGCCCGGCGACCAACCTCGAAGGGGCCGGGCAAGGCGTGCAGCGCAGG
CGGGCGGGAAAGGGGCAGGGGGGCCCGCGAGCGGGAGGGGAAATCGGTCC
CCCCCCGACCCGGCGGACAAGTCCCCCGTGCCCGTGCTTCCACCCGGCAA
GGTTCTGTTTCACAACAGAGCGGTCTCGGCCATGGGCCACGACGAGATGA
AGGAGGCCCTACAGGACCTAGACGTGGCTTCCTTCCGCAAGGACGACGAA
GAGCTGACGCACGACCTCATCGACGCCCTGGTGCTGCGCAAGGCGGAGGC
GGCCGAGCGGGACCCGAAGAAGCAGGCGTGGCGCGGGCGGCTCGTGCACA
AGATGAGGAAGTCCGAGCTCGCCGACATGCTGGAAGACTTCGAGCTCGAC
GACACCGGGAGGGCGGAGGAGATGCGCACCCGCTTCCGCGCGGCGCTTCG
CAAGTGGGCGGCAGACAAGATCAAGCTGCCTGCCGCGGGTCCCGGGCGCA
GTGGCAGCGGCCGCAGCAGTGGCGGCGGAGGCAGCGCTAGCACGGGCGGA
GCAACAACCGGCGGACCATCGGAGCCAGAGGACGAAGAGGACGCCGGTTC
GGACGTTGACGAGTCTAGTGCTACGGACGGCGCAGGCCGCGGCGCGCGTC
GGGGTTGGCAGGCCCGTACCCGCCGATCGGATGACGCCGCCGCTACCGCT
TCCTCCCGCTCGACGGCGTCGAGAGCCTCGCGGAAGAGCCCCGCCAAGAA
GCCGGCGGCGGAGAAGTCAAGGTCAGCTTCGGCGTCTGCGGCGTCTCGCC
GTGGTCGAGGGCGCAGCAGCAAGAGCTCGGCCGGCGGCGTGAAGGGACCG
GCGAAGACCCGTGCCACGAAGCCTGGGCGAAGCCGGTTGAGGGACAAGGA
ATCGGCGGTGTCCCCCAAGAGAGCCGCGTCTCCCAAGACCAAGAGAAAGG
CTGCCGGTGAGCATGCTGAGGTCCCACATCGACCGCATGGGCCTCGAGGC
CTCGGGGCGCCTCAAGCACGACCTCCAGCAGTGCCTCTGCGATGCCGTGC
GCTCCGGCAAAGGCCGGCACTCTCAAGCTCACACTCCCAAGCGGACGGCT
GGAAAGGCCGCTGCCGCGGCCGCTGCCGCTGCCGCTGCCGCTGCCACCGC
CGCGGCCAAGAAGAAAGTCGGCGGGAGCGGCGACAGCGACGGAGACGGAG
ACGAAAATGAGGACGACGCCGGCGAGCCCGGCGACCAACCTCGAAGGGGC
CGGGCAAGGCGTGCAGCGCAGGCGGGCGGGAAAGGGGCAGGGGGGCCCGC
GAGCGGGAGGGGAAATCGGTCCCCCCCCGACCCGGCGGACAAGTCCCCCG
TGCCCGTGCTTCCACCCGGCAAGGTTCTGTTTCACAACAGAGCGGTCTCG
GCCATGGGCCACGACGAGATGAAGGAGGCCCTACAGGACCTAGACGTGGC
TTCCTTCCGCAAGGACGACGAAGAGCTGACGCACGACCTCATCGACGCCC
TGGTGCTGCGCAAGGCGGAGGCGGCCGAGCGGGACCCGAAGAAGCAGGCG
TGGCGCGGGCGGCTCGTGCACAAGATGAGGAAGTCCGAGCTCGCCGACAT
GCTGGAAGACTTCGAGCTCGACGACACCGGGAGGGCGGAGGAGATGCGCA
CCCGCTTCCGCGCGGCGCTTCGCAAGTGGGCGGCAGACAAGATCAAGCTG
CCTGCCGCGGGTCCCGGGCGCAGTGGCAGCGGCCGCAGCAGTGGCGGCGG
AGGCAGCGCTAGCACGGGCGGAGCAACAACCGGCGGACCATCGGAGCCAG
AGGACGAAGAGGACGCCGGTTCGGACGTTGACGAGTCTAGTGCTACGGAC
GGCGCAGGCCGCGGCGCGCGTCGGGGTTGGCAGGCCCGTACCCGCCGATC
GGATGACGCCGCCGCTACCGCTTCCTCCCGCTCGACGGCGTCGAGAGCCT
CGCGGAAGAGCCCCGCCAAGAAGCCGGCGGCGGAGAAGTCAAGGTCAGCT
TCGGCGTCTGCGGCGTCTCGCCGTGGTCGAGGGCGCAGCAGCAAGAGCTC
GGCCGGCGGCGTGAAGGGACCGGCGAAGACCCGTGCCACGAAGCCTGGGC
GAAGCCGGTTGAGGGACAAGGAATCGGCGGTGTCCCCCAAGAGAGCCGCG
TCTCCCAAGACCAAGAGAAAGGCTGCCGGCGCTGGGAGCACGAGGTCCGG
AAGATCGAAGGCACCTGCTGCTGCTGCTGCAAAGACGAAGGCAAAGGCAA
AGGCTAATCCGTCTCGTGGCACCTCCCGTACGAAGCGTGCCGCCGCCACT
GCTCGCGGTGGGAGGAAGGCGGGCGAGGACAGCGACAGCGAAAGCGATGA
GGATGAGGATGGGGATGCTGGGGAAACCCCGGCCCCTGGTGCATCCGCAG
CAAAGGGCAAGGGTAAAGCGAAGGCAAAGGGCGCTGCTGGGAAGGGGAAG
GGGAAGGCGAAGGCGAAGCCGGAAAGCGGCAAGGGCAAGAAGGCAGTCTC
GACCCGGTCCAAGGCTGCTGCCCAAGAGAGCGCCTCCAAAGGCGAAGGCG
CGGAGGGAGACCAAAGTTCTAGCTCTGCGGACGAGGAAGAGGAAGAGGAA
GAGGAAGAGGAAGAGGAAGAAGGATCCCGCCGAGGAGGGGCCGGACGGCG
GCGTGGAGACCGCTCCTCCGCCTCGGCCCCCCCGGGCGCTTCTTCCTCCG
AGCGCAAGGCCGGCGGCGGAAAAGACGCCCAGCCGAAGGCCGCCGAAGCC
CCCTCGGGCAGTCCCAAGAAGCCCACGAAGAGCGCAGGCGGGGCCCCAGG
AAACGACGACGACGGCGGAGACGGCGATGACCATGAGGACGTAGGAAAGC
GGCGGGGTGCCAGGGGAGGGGCCGGCCGCGGCGGCGGGAAGGGGATCGGG
AACGCCGGTGGCGGTGGCGGCGATGGAAGCTCCAGCTCCGATGGGGACGG
AGGTGGGGAGGGTTCGGATGACGAGAAGGCCTCTCAGCCGGAAGAGGAAG
AGGAAGAGCGGGCAGAGGATGAGGATGAGGATGAGAATAAAGATACAGAC
GAAAACGAAGACGATGATGGCGACGAGGAAAAGGGTGACGGCGGTCAAGC
GGAGGACGCGGAGCAAGAGGCGGGCGTAGAAGCAACGGAGGGACAGGGCG
CCGGTGCTGCTCCTGCTGCTGCTCCTGCTGCTCCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGTCGCGGCGCTGGGAGCACGAGGTCCGGAAGATCG
AAGGCACCTGCTGCTGCTGCTGCAAAGACGAAGGCAAAGGCAAAGGCTAA
TCCGTCTCGTGGCACCTCCCGTACGAAGCGTGCCGCCGCCACTGCTCGCG
GTGGGAGGAAGGCGGGCGAGGACAGCGACAGCGAAAGCGATGAGGATGAG
GATGGGGATGCTGGGGAAACCCCGGCCCCTGGTGCATCCGCAGCAAAGGG
CAAGGGTAAAGCGAAGGCAAAGGGCGCTGCTGGGAAGGGGAAGGGGAAGG
CGAAGGCGAAGCCGGAAAGCGGCAAGGGCAAGAAGGCAGTCTCGACCCGG
TCCAAGGCTGCTGCCCAAGAGAGCGCCTCCAAAGGCGAAGGCGCGGAGGG
AGACCAAAGTTCTAGCTCTGCGGACGAGGAAGAGGAAGAGGAAGAGGAAG
AGGAAGAGGAAGAAGGATCCCGCCGAGGAGGGGCCGGACGGCGGCGTGGA
GACCGCTCCTCCGCCTCGGCCCCCCCGGGCGCTTCTTCCTCCGAGCGCAA
GGCCGGCGGCGGAAAAGACGCCCAGCCGAAGGCCGCCGAAGCCCCCTCGG
GCAGTCCCAAGAAGCCCACGAAGAGCGCAGGCGGGGCCCCAGGAAACGAC
GACGACGGCGGAGACGGCGATGACCATGAGGACGTAGGAAAGCGGCGGGG
TGCCAGGGGAGGGGCCGGCCGCGGCGGCGGGAAGGGGATCGGGAACGCCG
GTGGCGGTGGCGGCGATGGAAGCTCCAGCTCCGATGGGGACGGAGGTGGG
GAGGGTTCGGATGACGAGAAGGCCTCTCAGCCGGAAGAGGAAGAGGAAGA
GCGGGCAGAGGATGAGGATGAGGATGAGAATAAAGATACAGACGAAAACG
AAGACGATGATGGCGACGAGGAAAAGGGTGACGGCGGTCAAGCGGAGGAC
GCGGAGCAAGAGGCGGGCGTAGAAGCAACGGAGGGACAGGGCGCCGGTGC
TGCTCCTGCTGCTGCTCCTGCTGCTCCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGTCGCGCCAACCTCTGGGGCCGGTCCCGCTGCCGACCCGGAA
GCAGAGACTAACTTCGCTCGAGACGGCGCGGTTCAAATCGAGGCCGAGGC
CGGTGCGCGAGCCATGGAAGTCGACGGTGCGGTAGCTGCTGGTGCTACCG
GTGACGGCGGCGATGCTAGTGTCGGTGTCGGTCCCGCCGGGGCTCTACCG
GCGGGTGATGGCGAAGGCGGCACCGTGAATGAAGATGAAGATGGAGGTGG
GGGGAACGGGGTGCAATTGATGCGTCTGGAGGAGGATGAGGTGGCAGGAG
GCGCCGATGGCCCAGAGAATGGCGATGGCGATGGCGATGGCGATGGCGAT
GGCTCCGACCGGGATGCGGCAGCGGCGGCGGCAGAAGAGGACGGGGACGA
CGACGATACCGTGGAGAAAGCCGTGGAGGAAGGAGACACCGAAGAAGAGG
TGGACGGAGGTCAGGAGGAAGAGGACGCTGCTGCTGGTGCGGTAGGCGTG
CCTGCTGGTGCTGGCGATGGCGATGACCCCATGGACGAAGATGAAGAGCT
GGGAGAAGCGGACCTGGAGGAAAGCGGAAGGGAGGGCTTAGCAGAAGACG
ATGAGCACAAGCCAACCTCTGGGGCCGGTCCCGCTGCCGACCCGGAAGCA
GAGACTAACTTCGCTCGAGACGGCGCGGTTCAAATCGAGGCCGAGGCCGG
TGCGCGAGCCATGGAAGTCGACGGTGCGGTAGCTGCTGGTGCTACCGGTG
ACGGCGGCGATGCTAGTGTCGGTGTCGGTCCCGCCGGGGCTCTACCGGCG
GGTGATGGCGAAGGCGGCACCGTGAATGAAGATGAAGATGGAGGTGGGGG
GAACGGGGTGCAATTGATGCGTCTGGAGGAGGATGAGGTGGCAGGAGGCG
CCGATGGCCCAGAGAATGGCGATGGCGATGGCGATGGCGATGGCGATGGC
TCCGACCGGGATGCGGCAGCGGCGGCGGCAGAAGAGGACGGGGACGACGA
CGATACCGTGGAGAAAGCCGTGGAGGAAGGAGACACCGAAGAAGAGGTGG
ACGGAGGTCAGGAGGAAGAGGACGCTGCTGCTGGTGCGGTAGGCGTGCCT
GCTGGTGCTGGCGATGGCGATGACCCCATGGACGAAGATGAAGAGCTGGG
AGAAGCGGACCTGGAGGAAAGCGGAAGGGAGGGCTTAGCAGAAGACGATG
AGCACAAGGATGAAGGAGCAGACATGGACCAAGAGGTCGAGCTCGCCGCC
CTCAACCCCGAAGATGCAAACGCCGACCTCGACGCAGAGCCAGACGCAAA
CCTCGACGCGGATGCCGACCAAGGAGGCAGCAGCACGGACTTGGAGAACC
AGACAGACGACGGCGGCGCGGTGGCCCTTGCCCCCCAGCTCGGCGATGGC
GATGACGATGGCGACGATGTTTGTCCGGCGGCAGGTCCCCAAGAGCGTTC
CTTGGCAGATGAGGGGCTCGATGGAATAGATGCTTCAGGGTTGGGGGGGC
AGGGGGGCGCTGTTTCGGGAGACCCGTCTCAGCACGAGGAAGAGGATGGA
GATTGGGATGATGGAGTGGTGGCGTTGGATGGCCGCTCTAGTGGTGATGA
AGGAGCAGACATGGACCAAGAGGTCGAGCTCGCCGCCCTCAACCCCGAAG
ATGCAAACGCCGACCTCGACGCAGAGCCAGACGCAAACCTCGACGCGGAT
GCCGACCAAGGAGGCAGCAGCACGGACTTGGAGAACCAGACAGACGACGG
CGGCGCGGTGGCCCTTGCCCCCCAGCTCGGCGATGGCGATGACGATGGCG
ACGATGTTTGTCCGGCGGCAGGTCCCCAAGAGCGTTCCTTGGCAGATGAG
GGGCTCGATGGAATAGATGCTTCAGGGTTGGGGGGGCAGGGGGGCGCTGT
TTCGGGAGACCCGTCTCAGCACGAGGAAGAGGATGGAGATTGGGATGATG
GAGTGGTGGCGTTGGATGGCCGCTCTAGTGGT
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