prot_C-linearis_contig89.16428.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig89.16428.1
Unique Nameprot_C-linearis_contig89.16428.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1122
Homology
BLAST of mRNA_C-linearis_contig89.16428.1 vs. uniprot
Match: D7FVB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB0_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.680e-41
Identity = 119/273 (43.59%), Postives = 154/273 (56.41%), Query Frame = 0
Query:   29 SIGGTAIKDMKVSMLRSHIDRMGLEASGRLKHDLQQCLCDAVRSGKGRHSQA--HTPKRTAGKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAGEPGDQ-PRRGRARRAAQAGGKGAGGPASGRGNRSP-----PDPADKSPVPVLPPGKVLFHNRAVSAMGHDEMKEALQDLDVASFRKDDEELTHDLIDALVLRKAEAAERDPKKQAWRGRLVHKMRKSELADMLEDFELDDTGRAEEMRTRFRAALRKWAADKIKLPAAGPG 293
            S+ G  + DMKV+ L+ H++RMGL+A+G LK DLQ+CL DA+  G   HS    H P++T G                                    +  G+  D+ PRRGR       GG+ AG   S   + SP         D S  P  PP +V FH   VSAM  +EM+E L +LD+ S R  D+E+THDLIDALV RKAEAA+ +P+KQAW GR V+ MRK+ELADML  F+LDD G+ + +R RFR  LRKWAAD+I  PA+G G
Sbjct:  370 SVDGVRVADMKVATLKLHVERMGLKATGHLKADLQRCLRDAILDG---HSGGGGHAPRKTGGGVRVPVGTDKDGS-----------------------ESGGDVADEKPRRGR-------GGRSAGRDLSAAPSLSPLRRKRAGQVDPSQAPAFPPDQVWFHQTRVSAMNLEEMREKLHELDMPSLRLKDDEVTHDLIDALVQRKAEAADSNPRKQAWLGRPVYMMRKAELADMLRHFDLDDAGKVDVLRGRFRDELRKWAADEIAHPASGAG 609          
BLAST of mRNA_C-linearis_contig89.16428.1 vs. uniprot
Match: A0A6H5L7J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J5_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.550e-40
Identity = 117/269 (43.49%), Postives = 150/269 (55.76%), Query Frame = 0
Query:   29 SIGGTAIKDMKVSMLRSHIDRMGLEASGRLKHDLQQCLCDAV---RSGKGRHSQAHTPKRTAGKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAGEPGD-QPRRGRARRAAQAGGKGAGGPASGRGNRSPPDPADKSPVPVLPPGKVLFHNRAVSAMGHDEMKEALQDLDVASFRKDDEELTHDLIDALVLRKAEAAERDPKKQAWRGRLVHKMRKSELADMLEDFELDDTGRAEEMRTRFRAALRKWAADKIKLPAAGPG 293
            S+ G  + DMKV+ LR H++RMGL+A+G LK DLQ+CL DA+    SG G H+   T +R  G                                       G+  D +PRRGR  R    G      P++    R      D SP P   P +V FH   VSAM  +EM+E L +LD+ S R  D+E+THDLIDALV RKAEAA+ +P+KQAW GR V+ MRK+ELADML  F LDD G+ + +R RFR ALRKWAA++I  PA+G G
Sbjct:  460 SVDGVRVADMKVATLRLHVERMGLKATGHLKADLQRCLRDALLDGHSGGGGHAPRKTGRRVRG---------------------------------------GDEADAKPRRGRGGR--PVGRDPPAAPSASPLRRKRAGQVDPSPAPAFHPDQVWFHQTRVSAMNLEEMREKLHELDMPSLRLKDDEVTHDLIDALVQRKAEAADSNPRKQAWLGRPVYMMRKAELADMLRHFNLDDAGKVDVLRGRFRDALRKWAAEEIAHPASGGG 687          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVB0_ECTSI1.680e-4143.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7J5_9PHAE1.550e-4043.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 243..277
e-value: 3.1
score: 13.2
coord: 35..70
e-value: 0.41
score: 19.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:584061..589131 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16428.1mRNA_C-linearis_contig89.16428.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig89 584061..589131 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig89.16428.1 ID=prot_C-linearis_contig89.16428.1|Name=mRNA_C-linearis_contig89.16428.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1122bp
GEKAGAGAGGGRRGRARTPVPAEAPISLSIGGTAIKDMKVSMLRSHIDRM
GLEASGRLKHDLQQCLCDAVRSGKGRHSQAHTPKRTAGKAAAAAAAAAAA
AATAAAKKKVGGSGDSDGDGDENEDDAGEPGDQPRRGRARRAAQAGGKGA
GGPASGRGNRSPPDPADKSPVPVLPPGKVLFHNRAVSAMGHDEMKEALQD
LDVASFRKDDEELTHDLIDALVLRKAEAAERDPKKQAWRGRLVHKMRKSE
LADMLEDFELDDTGRAEEMRTRFRAALRKWAADKIKLPAAGPGRSGSGRS
SGGGGSASTGGATTGGPSEPEDEEDAGSDVDESSATDGAGRGARRGWQAR
TRRSDDAAATASSRSTASRASRKSPAKKPAAEKSRSASASAASRRGRGRS
SKSSAGGVKGPAKTRATKPGRSRLRDKESAVSPKRAASPKTKRKAAGAGS
TRSGRSKAPAAAAAKTKAKAKANPSRGTSRTKRAAATARGGRKAGEDSDS
ESDEDEDGDAGETPAPGASAAKGKGKAKAKGAAGKGKGKAKAKPESGKGK
KAVSTRSKAAAQESASKGEGAEGDQSSSSADEEEEEEEEEEEEEGSRRGG
AGRRRGDRSSASAPPGASSSERKAGGGKDAQPKAAEAPSGSPKKPTKSAG
GAPGNDDDGGDGDDHEDVGKRRGARGGAGRGGGKGIGNAGGGGGDGSSSS
DGDGGGEGSDDEKASQPEEEEEERAEDEDEDENKDTDENEDDDGDEEKGD
GGQAEDAEQEAGVEATEGQGAGAAPAAAPAAPAAAAAAAAAAVAPTSGAG
PAADPEAETNFARDGAVQIEAEAGARAMEVDGAVAAGATGDGGDASVGVG
PAGALPAGDGEGGTVNEDEDGGGGNGVQLMRLEEDEVAGGADGPENGDGD
GDGDGDGSDRDAAAAAAEEDGDDDDTVEKAVEEGDTEEEVDGGQEEEDAA
AGAVGVPAGAGDGDDPMDEDEELGEADLEESGREGLAEDDEHKDEGADMD
QEVELAALNPEDANADLDAEPDANLDADADQGGSSTDLENQTDDGGAVAL
APQLGDGDDDGDDVCPAAGPQERSLADEGLDGIDASGLGGQGGAVSGDPS
QHEEEDGDWDDGVVALDGRSSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom