prot_C-linearis_contig82.15991.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.15991.1
Unique Nameprot_C-linearis_contig82.15991.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length172
Homology
BLAST of mRNA_C-linearis_contig82.15991.1 vs. uniprot
Match: Q6XLT5_9PHYC (FirrV-1-N1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT5_9PHYC)

HSP 1 Score: 133 bits (334), Expect = 4.970e-34
Identity = 80/171 (46.78%), Postives = 100/171 (58.48%), Query Frame = 0
Query:    1 MSFDLISGYSVRMYWKAAFKAAIV---DVRGSNYHQSATCED--AAFAVVNLEPSSTYHVTVSDGIQT---LNNSFTRKDSDFLCLENLYEGIRRPDGVYDTTRFEKNVHDVIFESFSQIVNSGDTILASMAVNGIPHDVETVAVRDGSS--VKVDDQNNYILPFFCRQQE 161
            M FDL S YSVR++WKA +  + V    +   +   +A C D  AA  VVNL PS+TYHVTV     T   LN  F    +   CL NLY  IR  DG+YDTTRFEK +HDV  E+FS +V+ GD ILA + VNG+   V TVA  +GS   V VD Q N  LPF  + ++
Sbjct:    1 MDFDLRSAYSVRVFWKADYVPSTVMCYPLGRPDQVIAAQCVDREAAVVVVNLSPSTTYHVTVKSARDTSADLNGQFVTMSAANPCLHNLYSSIRTTDGIYDTTRFEKELHDVFLENFSGVVSPGDRILAKVDVNGLSQHVLTVAATEGSDLEVDVDAQANVFLPFCSKHKD 171          
BLAST of mRNA_C-linearis_contig82.15991.1 vs. uniprot
Match: B5LWF4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWF4_9PHYC)

HSP 1 Score: 131 bits (329), Expect = 3.340e-33
Identity = 80/179 (44.69%), Postives = 105/179 (58.66%), Query Frame = 0
Query:    1 MSFDLISGYSVRMYWKAAFKAAIVD--VRGSNYHQSATC--EDAAFAVVNLEPSSTYHVTVSDG---IQTLNNSFTRKDSDFLCLENLYEGIRRPDGVYDTTRFEKNVHDVIFESFSQIVNSGDTILASMAVNGIPHDVETVAVR-DGSSVKVDDQNNYILPFFCRQQELPPDRDSHRH 171
            M FDL+S +S R++WKA F AA V     GS    +A C  ++AA  VVNLEP +TY V+V         L  SFT K S+   L  LY  IR P+G++DTTRF+  +HD+  E+FS IV+ GD ILA + VNG P +V TVA   +GSS  VD ++N  LPF  +  E      + RH
Sbjct:   20 MDFDLVSAFSARIFWKADFTAASVHCVASGSAKPIAAQCSNDEAAVVVVNLEPGTTYAVSVRSAETKSPDLYGSFTTKSSENPELSALYSSIRTPEGIFDTTRFDTKLHDIFVENFSSIVSPGDRILAKVVVNGAPQEVMTVAASGEGSSFDVDAESNIFLPFHRKTGEALVQTVTLRH 198          
BLAST of mRNA_C-linearis_contig82.15991.1 vs. uniprot
Match: Q6XLY0_9PHYC (FirrV-1-B56 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLY0_9PHYC)

HSP 1 Score: 127 bits (318), Expect = 1.030e-31
Identity = 70/166 (42.17%), Postives = 95/166 (57.23%), Query Frame = 0
Query:    1 MSFDLISGYSVRMYWKAAFKAAIVDVRGSNYHQ---SATC--EDAAFAVVNLEPSSTYHVTVSDGI---QTLNNSFTRKDSDFLCLENLYEGIRRPDGVYDTTRFEKNVHDVIFESFSQIVNSGDTILASMAVNGIPHDVETVAVRDGSSVKVD--DQNNYILPFF 156
            M FDL+S YSVR++WK+ +  ++V     N+     +A C   +AA  +VNL   +TYHV++       Q L   F     D  CL NLY  IRRPDGVYDTT FEK +HDV  + FS IV+ GD I A + VNG+  +V  +A  +G  +++D     N  LPFF
Sbjct:    1 MDFDLVSAYSVRVFWKSDYHPSVVYCYPDNHPDQVIAAQCVEHEAAIVIVNLHADTTYHVSLESTAPESQRLTGHFVTCPKDQPCLANLYASIRRPDGVYDTTSFEKELHDVFLQHFSTIVSPGDRIFAKVEVNGVSQNVMAIAATEGVELEIDAAPDTNVFLPFF 166          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.15991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Q6XLT5_9PHYC4.970e-3446.78FirrV-1-N1 n=1 Tax=Feldmannia irregularis virus a ... [more]
B5LWF4_9PHYC3.340e-3344.69Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XLY0_9PHYC1.030e-3142.17FirrV-1-B56 n=1 Tax=Feldmannia irregularis virus a... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:322892..323407 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.15991.1mRNA_C-linearis_contig82.15991.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 322889..324086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.15991.1 ID=prot_C-linearis_contig82.15991.1|Name=mRNA_C-linearis_contig82.15991.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=172bp
MSFDLISGYSVRMYWKAAFKAAIVDVRGSNYHQSATCEDAAFAVVNLEPS
STYHVTVSDGIQTLNNSFTRKDSDFLCLENLYEGIRRPDGVYDTTRFEKN
VHDVIFESFSQIVNSGDTILASMAVNGIPHDVETVAVRDGSSVKVDDQNN
YILPFFCRQQELPPDRDSHRH*
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