prot_C-linearis_contig81.15968.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig81.15968.1
Unique Nameprot_C-linearis_contig81.15968.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length66
Homology
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BLAST of mRNA_C-linearis_contig81.15968.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 6.600e-10
Identity = 37/56 (66.07%), Postives = 39/56 (69.64%), Query Frame = 0 
Query:    1 MSPFEAAAAAHAEDAGDCRVGDSADERREQLEAIADMEVSAFKAAAGIRVWDMKKT 56
            MS FEAAAA             SADE+REQL AI DMEVSAFKAA GIRVWDM+KT
Sbjct:  417 MSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKT 472
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig81.15968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCS5_ECTSI6.600e-1066.07Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig81contigC-linearis_contig81:689983..690180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig81.15968.1mRNA_C-linearis_contig81.15968.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig81 689970..690180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig81.15968.1 ID=prot_C-linearis_contig81.15968.1|Name=mRNA_C-linearis_contig81.15968.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=66bp
MSPFEAAAAAHAEDAGDCRVGDSADERREQLEAIADMEVSAFKAAAGIRV
WDMKKTKKAGETVEKK
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