prot_C-linearis_contig81.15961.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig81.15961.1
Unique Nameprot_C-linearis_contig81.15961.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length309
Homology
BLAST of mRNA_C-linearis_contig81.15961.1 vs. uniprot
Match: A0A6H5JZC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC6_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 4.760e-97
Identity = 154/260 (59.23%), Postives = 192/260 (73.85%), Query Frame = 0
Query:   44 MNAVLKANSLGIHKLKVGQLQATEYNRQISKSGLTVVMDSIKRKGWSESSLPYVLVPREQLPDGRQTVWTPEVLSKLSVFVLDGNHRLAALTHLHGLEFEIDCWCFLHFDDDVIVNSLARSTNVITSEAVAVTTTFDRIFSCKKAMEAIMKGQHM-DDAAKVTASMLADAYLKGGDTPPSNPLLCQNKRLVLGMKAPAFFALKEASESDDKNVDVA---------------------SLSKNLLDADAALKFPRGKDVEQ 281
            MN VL+AN LG+H+LKV Q++ TEY RQ+SK G+  V +SI+ +GW  ++ PYVLVPREQLPDG+QTVW  +VLS L V+ LDGNHRL ALT L+G EFE++C C+LHFDD V+VN+LARS N  T+EA A TTT+DRIFSCKKA+EAIM  +++ +DA+KVTA ML+DAY K GD PPSNP LC +KRLV+G+K PAF +LKE SES++K VD+                      SLSK LLD DA LKFP G+D EQ
Sbjct:    1 MNQVLQANFLGVHRLKVKQIKGTEYTRQLSKVGVKSVKESIEARGWQSANSPYVLVPREQLPDGKQTVWNSDVLSSLEVYCLDGNHRLRALTILYGGEFELECRCYLHFDDAVMVNALARSVNN-TTEATAKTTTYDRIFSCKKALEAIMAAENLGNDASKVTARMLSDAYKKSGDAPPSNPSLCSHKRLVIGLKEPAFASLKEVSESEEKGVDMXGAXXXXXXXXXXXXXXXXXXQSLSKTLLDCDAVLKFPFGRDFEQ 259          
BLAST of mRNA_C-linearis_contig81.15961.1 vs. uniprot
Match: A0A6H5JXW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW4_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 1.850e-94
Identity = 162/291 (55.67%), Postives = 205/291 (70.45%), Query Frame = 0
Query:    9 EPPAGTAASPA--AVAPTTTAS-------LPPAPAPGRDDEPMKMNAVLKANSLGIHKLKVGQLQATEYNRQISKSGLTVVMDSIKRKGWSESSLPYVLVPREQLPDGRQTVWTPEVLSKLSVFVLDGNHRLAALTHLHGLEFEIDCWCFLHFDDDVIVNSLAR---STNVI-----TSEAVAVTTTFDRIFSCKKAMEAIMKGQHM-DDAAKVTASMLADAYLKGGDTPPSNPLLCQNKRLVLGMKAPAFFALKEASESDDKNVDVASLSKNLLDADAALKFPRGKDVEQ 281
            +PPAG  A P   A AP TT +       LPP P          MN VL+AN LG+H+LKV +++ TEY RQ+SK G+  V +SI+ +GW  ++ PYVLVPREQLPDG+QTVW  +VLS L V+ LDGNHRL ALT  +G +FE++C C+LHFDD ++VN+LAR   S   I     T+ A A TTT+DRIFSCKKA+EAIM  +++ +DA+KVTA ML+DAY K GD PPSNP LC ++RLV+G+K  AF ALKE SES+DK VD+ SL K LLD +A LKFP G+D EQ
Sbjct:    3 QPPAGYDALPTSTAAAPVTTPAASAQQDGLPPGPPSSAGS----MNQVLQANFLGVHRLKVKRIKGTEYTRQLSKVGVKSVKESIEARGWQSANSPYVLVPREQLPDGKQTVWNSDVLSSLEVYCLDGNHRLRALTIFYGGDFELECRCYLHFDDAIMVNALARNDVSPEYIAGVNSTTGATAKTTTYDRIFSCKKALEAIMAAENLGNDASKVTARMLSDAYKKSGDAPPSNPSLCSHERLVIGLKGLAFAALKEMSESEDKGVDMQSLPKTLLDCEAVLKFPFGRDFEQ 289          
BLAST of mRNA_C-linearis_contig81.15961.1 vs. uniprot
Match: A0A6H5JDB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB1_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 3.510e-82
Identity = 164/326 (50.31%), Postives = 203/326 (62.27%), Query Frame = 0
Query:   10 PPAGTAASPA--AVAPTTTAS-------LPPAPAPGRDDEPMKMNAVLKANSLGIHKLKVGQLQATEYNRQISKSGLTVVMDSIKRKGWSESSLPYVLVPREQLPDGRQTVWTPEVLSKLSVFVLDGNHRLAALTHLHGLEFEIDCWCFLHFDDDVIVNSLARSTNVITSEAVAVTTTFDRIFSCK--------------------------------------------KAMEAIMKGQHM-DDAAKVTASMLADAYLKGGDTPPSNPLLCQNKRLVLGMKAPAFFALKEASESDDKNVDVASLSKNLLDADAALKFPRGKDVEQ 281
            PPAG  A P   A AP TT +       LPP P          MN V +AN LG+H+LKV Q+  TEY RQ+SK G+  V +SI+ +GW  ++ PYVLVPREQLPDG+QTVW  +VLS L V+ LDGNHR+ AL  L+G EFE++C C+LHFDD V+VN+LARS N  T++A A TTT+DRIFSCK                                            KA+EAIM  +++ +D +KVTA ML+DAY K GD PPSNP LC +KRLV+ +K PAF ALKE SES++K VD+ SLSK LLD DA LKFP G+D EQ
Sbjct:   42 PPAGHDALPTSTAAAPVTTPAASAQQDGLPPGPPSSAGS----MNQVQQANFLGMHRLKVKQINGTEYTRQLSKVGVKSVKESIEARGWQGANSPYVLVPREQLPDGKQTVWNSDVLSSLEVYCLDGNHRVRALRILYGGEFELECRCYLHFDDAVMVNALARSLNN-TTKATAKTTTYDRIFSCKXCSHQCHARFNTSRSVSPEYVAGXXXXXXXXXXXXXXXXXXXXXKALEAIMAAENLGNDGSKVTARMLSDAYKKSGDAPPSNPSLCSHKRLVIRLKGPAFAALKEVSESEEKGVDMQSLSKTLLDCDAVLKFPFGRDFEQ 362          
BLAST of mRNA_C-linearis_contig81.15961.1 vs. uniprot
Match: D7FYY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY9_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.990e-28
Identity = 59/94 (62.77%), Postives = 74/94 (78.72%), Query Frame = 0
Query:  189 MEAIMKGQHM-DDAAKVTASMLADAYLKGGDTPPSNPLLCQNKRLVLGMKAPAFFALKEASESDDKNVDVASLSKNLLDADAALKFPRGKDVEQ 281
            MEA+M   ++ +DA+KVTA ML+DAY K GD+PPSNP LC  KRLV+G+KAPAF ALK  SES++K VD+  LSK+LLD DA LKFP G++ EQ
Sbjct:    1 MEAVMVKHNLGNDASKVTAKMLSDAYKKSGDSPPSNPTLCSYKRLVIGLKAPAFAALKAVSESEEKGVDIGCLSKSLLDCDAVLKFPPGREFEQ 94          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig81.15961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JZC6_9PHAE4.760e-9759.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXW4_9PHAE1.850e-9455.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDB1_9PHAE3.510e-8250.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYY9_ECTSI2.990e-2862.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig81contigC-linearis_contig81:579808..581882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig81.15961.1mRNA_C-linearis_contig81.15961.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig81 578934..583463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig81.15961.1 ID=prot_C-linearis_contig81.15961.1|Name=mRNA_C-linearis_contig81.15961.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=309bp
MEATLRPREPPAGTAASPAAVAPTTTASLPPAPAPGRDDEPMKMNAVLKA
NSLGIHKLKVGQLQATEYNRQISKSGLTVVMDSIKRKGWSESSLPYVLVP
REQLPDGRQTVWTPEVLSKLSVFVLDGNHRLAALTHLHGLEFEIDCWCFL
HFDDDVIVNSLARSTNVITSEAVAVTTTFDRIFSCKKAMEAIMKGQHMDD
AAKVTASMLADAYLKGGDTPPSNPLLCQNKRLVLGMKAPAFFALKEASES
DDKNVDVASLSKNLLDADAALKFPRGKDVEQGTSSTYCQGSKPTTRERKP
PSRATSPS*
back to top