prot_C-linearis_contig80.15888.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15888.1
Unique Nameprot_C-linearis_contig80.15888.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length252
Homology
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Match: D7FV73_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV73_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 3.750e-110
Identity = 163/188 (86.70%), Postives = 175/188 (93.09%), Query Frame = 0
Query:   64 LLALPTFTRRSMSTGGGGKGGDTAGPPGVIKGFGRRQKPVDSGNTALGKGFDLMEDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTARLDPVLVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDPEEETILSK 251
            L AL   +RR MS+  GGKG +TAGPPG IKGFGRRQKPVD+GNTALGKGFDLMEDDP+SRKK+VIGGYDPHGFQLGDGVDVRGSMICMPNSFVLW+PKRPS+I VES R++ELVIPKIDLII+GVGERMTARLDPVLVKHL SKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQL PEEE+ILSK
Sbjct:   25 LTALLFCSRRGMSSARGGKGSNTAGPPGTIKGFGRRQKPVDAGNTALGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRMVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEESILSK 212          
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Match: A0A7S1UI11_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI11_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.570e-29
Identity = 60/137 (43.80%), Postives = 90/137 (65.69%), Query Frame = 0
Query:  110 LGKGFDLMEDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTARLDPVLVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDPEEE 246
            +G+G D+M    E   KI + G++  GF +G  ++++ S++ +PNSF LWKP+   EI VES  +  L+ PKI+++IIG GER    L P L+++   KGI VE M T +A +T+NVL +EDR VAAALL + P ++
Sbjct:   43 IGRGHDIMSGVNEGTMKITVDGFEDEGFIIGS-INIKSSVLLLPNSFFLWKPRTVDEITVESLLLPTLITPKIEMLIIGKGERNVEPLAPELLRYFKEKGIVVEHMSTSHALATYNVLTSEDRNVAAALLTIVPTDK 178          
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Match: A0A067CV35_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CV35_SAPPC)

HSP 1 Score: 117 bits (292), Expect = 3.100e-29
Identity = 56/132 (42.42%), Postives = 90/132 (68.18%), Query Frame = 0
Query:  113 GFDLMEDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTARLDPVLVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDPE 244
            G D+ ++      K+ I  YD  GF + D V++RGS+  +PN  ++WKP+   EI +ES  +  +  P I+++++G G+R+  +L+P LV++L S GI VE +D+ NAC+TFN+LNAEDR+VAAA+L  +P+
Sbjct:   25 GHDMHKEMMTGTSKVSISEYDDGGFVVND-VNMRGSVALLPNIAMMWKPRSLDEITIESLNVFTVANPPIEILVLGCGKRIAKQLEPSLVEYLKSNGIVVEYLDSFNACATFNILNAEDRKVAAAILVNEPK 155          
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Match: A0A1V9YKK9_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKK9_9STRA)

HSP 1 Score: 116 bits (291), Expect = 4.120e-29
Identity = 58/132 (43.94%), Postives = 89/132 (67.42%), Query Frame = 0
Query:  113 GFDLMEDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTARLDPVLVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDPE 244
            G D+ ++      K+ I  YD  GF + D V++RGS+  +P+  ++WKP    EI VES  I  +  P I+++++G G+R+  +LDP LV++L S GI VE +D+ NAC+TFN+LNAEDR+VAAA+L  +P+
Sbjct:   23 GHDMHKEMMTGTSKVSIAEYDDGGFVVND-VNMRGSIALLPSIAMMWKPNTMEEITVESLNIFTVANPPIEILVLGCGKRIARQLDPKLVEYLKSHGIVVEYLDSFNACATFNILNAEDRKVAAAILVNEPK 153          
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Match: K8Z3H4_NANGC (Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3H4_NANGC)

HSP 1 Score: 118 bits (295), Expect = 5.080e-29
Identity = 65/141 (46.10%), Postives = 91/141 (64.54%), Query Frame = 0
Query:  110 LGKGFDLM---EDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTAR-LDPVLVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDPEEE 246
            LGKG D++    ++   R++  + GYD  GF++ D V+ RGS++ +P +  LWKPK+  EI  ES   L +V P I+++IIG GE +  R L    +K L + G+ VE MDT +ACSTFN+LN EDRRVAAALL +D   E
Sbjct:   68 LGKGIDVLAVGNEEEAGRERTFLLGYDGQGFEVRD-VNYRGSILALPTACFLWKPKKIEEITPESLAPLLIVKPAIEILIIGTGEEVVGRALALTTLKFLAANGVAVEHMDTTSACSTFNILNQEDRRVAAALLAVDAAAE 207          
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Match: K3X683_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X683_GLOUD)

HSP 1 Score: 114 bits (284), Expect = 5.690e-28
Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 0
Query:  113 GFDLMEDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTARLDPVLVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDPEEETIL 249
            G D+ ++      KI +  YD  GF + D V++RG +   P   +LWKPKR  EI  ES  +  +  P I+++++G G R+   LDP + + L   GI VE +D+VNAC+TFN+LNAEDR+VAAA+L  DPE   I+
Sbjct:   26 GHDMHKEMLNGTAKISVTDYDEGGFVVND-VNMRGGVALYPEIAMLWKPKRFEEITKESMTVFTVANPPIEILVLGCGARIQFNLDPEIKQFLKENGIVVEYLDSVNACATFNILNAEDRKVAAAILPYDPEASKIV 161          
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Match: A0A7S3YDW4_HETAK (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YDW4_HETAK)

HSP 1 Score: 115 bits (287), Expect = 1.050e-27
Identity = 56/135 (41.48%), Postives = 89/135 (65.93%), Query Frame = 0
Query:  110 LGKGFDLMEDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTARLDPVLVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDPE 244
            LGKGFD++ D  E + K VI GYD  GF +  GV V G ++  P+ ++LW+P + S +++E+ + + ++ PKI+++++G G  +    D  +      +GI +E M+T+NAC+TFN+L AE R VAAALL +DPE
Sbjct:   60 LGKGFDILADYDEMQSKTVIEGYDSWGFTI-KGVRVEGGVLAFPSHYLLWRPTKFSHLSLEALQPVAIIKPKIEILVLGCGPTIPTLPDREIYTFFKKRGISLEVMNTINACATFNILCAEGRPVAAALLPIDPE 193          
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Match: A0A5D6XPN1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPN1_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.180e-27
Identity = 58/136 (42.65%), Postives = 85/136 (62.50%), Query Frame = 0
Query:  109 ALGKGFDLMEDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTARLDPVLVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDPE 244
            A+  G DL ++      K+ +  YD  GF + D V++RG +   P   +LWKPKR  EI  ES  +  +  P I+++++G G R+   LDP + + L   GI VE +D+VNAC+TFN+LNAEDR+VAAA+L  DP+
Sbjct:   21 AINYGHDLHKEMLNGTAKLSVTDYDEGGFVVND-VNMRGGVALYPEIAMLWKPKRFEEITKESLTVFTVANPPIEILVLGCGPRIQHHLDPEIKQFLKVNGIVVEYLDSVNACATFNILNAEDRKVAAAILPCDPD 155          
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Match: A0A485LLY5_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLY5_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.020e-26
Identity = 58/146 (39.73%), Postives = 91/146 (62.33%), Query Frame = 0
Query:   98 RRQKPVDSGNTALGKGFDLMEDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTARLDPVLVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDP 243
            RRQ    +G   +  G D+ ++      K+ I  YD  GF + + V++RG++   P   +LWKP+   EI  ES  +  +  P ++++++G G+R+   LDP LV++L S GI VE +D+ NAC+TFN+LNAEDR+VAAA+L + P
Sbjct:    7 RRQLTRPAGVRWINYGHDMHKEMMTGTMKVAITEYDDGGFVVNE-VNLRGAIALFPEIAMLWKPRTMDEITKESLAVFTVANPPVEILVLGCGKRIPRLLDPSLVEYLKSHGIVVEYVDSFNACATFNILNAEDRKVAAAILPVVP 151          
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Match: A0A2D4BWQ8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWQ8_PYTIN)

HSP 1 Score: 110 bits (274), Expect = 1.600e-26
Identity = 55/135 (40.74%), Postives = 87/135 (64.44%), Query Frame = 0
Query:  109 ALGKGFDLMEDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTARLDPVLVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDP 243
            ++  G D+ ++      KI +  YD  GF + D V++RG +  +P+  +LWKP+R  EI  ES  +  +  P ++++I+G G ++  +LDP + + L   GI VE +D+VNAC+TFN+LNAEDR+VAAA+L  DP
Sbjct:   23 SINYGHDMHKEMLNGTTKISVTEYDEGGFVVND-VNLRGGVALLPDIAMLWKPRRFEEITKESLEVFTIANPPVEILILGCGAKIQHQLDPSIKEFLKVNGIVVEYLDSVNACATFNILNAEDRKVAAAILPWDP 156          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV73_ECTSI3.750e-11086.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1UI11_9STRA1.570e-2943.80Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A067CV35_SAPPC3.100e-2942.42Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YKK9_9STRA4.120e-2943.94NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
K8Z3H4_NANGC5.080e-2946.10Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidac... [more]
K3X683_GLOUD5.690e-2843.07Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S3YDW4_HETAK1.050e-2741.48NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A5D6XPN1_9STRA2.180e-2742.65Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A485LLY5_9STRA1.020e-2639.73NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2D4BWQ8_PYTIN1.600e-2640.74Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007523NDUFAF3/Mth938 domain-containing proteinPFAMPF04430DUF498coord: 129..239
e-value: 7.5E-31
score: 106.4
IPR007523NDUFAF3/Mth938 domain-containing proteinPANTHERPTHR21192NUCLEAR PROTEIN E3-3coord: 109..243
IPR036748MTH938-like superfamilyGENE3D3.40.1230.10coord: 124..242
e-value: 7.8E-34
score: 118.0
IPR036748MTH938-like superfamilySUPERFAMILY64076MTH938-likecoord: 126..240
NoneNo IPR availablePANTHERPTHR21192:SF2NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 3coord: 109..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:465671..468940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15888.1mRNA_C-linearis_contig80.15888.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 465086..468963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15888.1 ID=prot_C-linearis_contig80.15888.1|Name=mRNA_C-linearis_contig80.15888.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=252bp
MMTGATARPCARGARLLVRGRDGNAAHIRTGYAASRLASLSSANWVAPST
AAAQARPASPSAGLLALPTFTRRSMSTGGGGKGGDTAGPPGVIKGFGRRQ
KPVDSGNTALGKGFDLMEDDPESRKKIVIGGYDPHGFQLGDGVDVRGSMI
CMPNSFVLWKPKRPSEIAVESFRILELVIPKIDLIIIGVGERMTARLDPV
LVKHLGSKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLDPEEETILS
K*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007523NDUFAF3/AAMDC
IPR036748MTH938-like_sf