prot_C-linearis_contig8.15697.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15697.1
Unique Nameprot_C-linearis_contig8.15697.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length846
Homology
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BLAST of mRNA_C-linearis_contig8.15697.1 vs. uniprot
Match: D7G8F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F3_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 7.610e-100
Identity = 183/322 (56.83%), Postives = 216/322 (67.08%), Query Frame = 0 
Query:  282 IQALNVPLVAIACAESKIPSALACWCDGGTGSSSAPAAARPPSVGSTVXXXXXXXATAEMLPTEGSVEITIMDECYHPRQLLLSEKVKETLRGTGALYAVDSSCVYPVNTSGGGVAGGQAGEGAGAGGATTILSPEEFRRSQEGCLPAVLADLTSKPRLPLQWRVQNQMFTPGDKRAILPHQFEDSAHSTTGSAFTVLCWSELREFSASRFSGFGKPVSRPAGGFTQDLISLLGGGERVGEAALRQTLEFTAAFAPDGQRLTDSTTGGG--VQGGTDCAPPPGNCTILANEIAGLGFGGCLLHLLRLGSISSLSVVQALLCR 601
            ++ALNVPLVAI+C + +IPSAL CWC G     +A          S+        AT +  P EGS  ITIMDECYHP QL LSEKV++ LRGTGALYAVDSSCVYPVNTSGGG  G +AG GA  GG T +LSPEEFR++Q+GCLPAVLADLT +PRLPL+ ++QNQ F  G +RA+LP +F+  A +T  SA  V  W +LRE SA RF GFGKP+        +DLIS+ GGGERVGE ALRQT+    A  PDGQR   +  G      G     PP G C  L +E AGLGFGG LLH LRLGS+SSLSVVQA + R
Sbjct:    5 LRALNVPLVAISCVDGEIPSALTCWCRGSRDGGAAD--------NSSESDTAATGATTKRSPMEGSAHITIMDECYHPTQLSLSEKVRDALRGTGALYAVDSSCVYPVNTSGGG--GTRAGVGAATGGVTGVLSPEEFRQTQDGCLPAVLADLTIRPRLPLKPQLQNQTFVGGGERAMLPREFQLGAGATASSAIAV-DWDKLREISARRFPGFGKPIPSELASSDKDLISIFGGGERVGEMALRQTVHLAVASTPDGQRSAGTGVGSSSHTDGNGGLPPPEGICGRLESETAGLGFGGSLLHFLRLGSVSSLSVVQARIHR 315
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BLAST of mRNA_C-linearis_contig8.15697.1 vs. uniprot
Match: A0A6H5K9X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9X8_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 3.530e-53
Identity = 100/155 (64.52%), Postives = 119/155 (76.77%), Query Frame = 0 
Query:  345 EGSVEITIMDECYHPRQLLLSEKVKETLRGTGALYAVDSSCVYPVNTSGGGVAGGQAGEGAGAGGATTILSPEEFRRSQEGCLPAVLADLTSKPRLPLQWRVQNQMFTPGDKRAILPHQFEDSAHSTTGSAFTVLCWSELREFSASRFSGFGKPV 499
            EGS  ITIMDECYHP QL LSEK ++ LRGTGALYAVDSSCVYPVNTSGGG  G +AG  A  G  T +LSPE+FR++Q+GCLPAVLADLT +PRLPL+ ++Q QMF  G +RA+LP +F+  A +T  SA  V  W +LRE SA RF GFGKP+
Sbjct:    2 EGSAHITIMDECYHPTQLSLSEKARDALRGTGALYAVDSSCVYPVNTSGGG--GARAGVAAAMGSVTGVLSPEDFRQTQDGCLPAVLADLTMRPRLPLKPQLQKQMFVGGGERAMLPREFQLGAGATASSAIAV-DWDKLREISARRFPGFGKPI 153
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8F3_ECTSI7.610e-10056.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9X8_9PHAE3.530e-5364.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..845
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2660664..2667705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15697.1mRNA_C-linearis_contig8.15697.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2659766..2668157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15697.1 ID=prot_C-linearis_contig8.15697.1|Name=mRNA_C-linearis_contig8.15697.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=846bp
MVAAAAAAAAAVSVVPAARIGEHVAKVDGDRRGNNTPKTAKTAPAKSAGV
EASVRPGVKEAPGSGGGNRGGDGRVLSGAASLVRSFLKRGSTASVPSPRD
MPHIHASSPPKTPISLASLVAGVPPGSGGSAAAGFRTPTAGTDNDTQTPR
RGGDRFFHSAWPPSLKKRRRILYYPKPNDPVGRRILYWVRGNCRVKDNLG
LSVAFWLSAQTQLPLQAVTFVDPTIGRSMHSCNVATSSDERTTRLSGARG
EQHGAERQEVPFRMAVEASALCEMEEALRVRIQALNVPLVAIACAESKIP
SALACWCDGGTGSSSAPAAARPPSVGSTVAGAAAAAATAEMLPTEGSVEI
TIMDECYHPRQLLLSEKVKETLRGTGALYAVDSSCVYPVNTSGGGVAGGQ
AGEGAGAGGATTILSPEEFRRSQEGCLPAVLADLTSKPRLPLQWRVQNQM
FTPGDKRAILPHQFEDSAHSTTGSAFTVLCWSELREFSASRFSGFGKPVS
RPAGGFTQDLISLLGGGERVGEAALRQTLEFTAAFAPDGQRLTDSTTGGG
VQGGTDCAPPPGNCTILANEIAGLGFGGCLLHLLRLGSISSLSVVQALLC
RPPDADTSAAGKEQHPKMCKSRRRLLEQVLKREYALYRSHSYHRKMMGRV
GGTAPAATTRGSISPPPAKGQSWRGWMGIVPAWVWKELKKGQRDARQHQR
HNPGEIRSAGSTVPSSVNDEIFSAIQVRLTTGARLHPSLASYWARAVVEM
VLIPSQAVSLLVDMAEEFCLGAANAGDVVPELLDSAFGVLKLPQTPVAAG
TAACVPYPGQALETVEGFRSALGGSDALARFLSPLPVPQAPTARC*
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