prot_C-linearis_contig8.15675.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15675.1
Unique Nameprot_C-linearis_contig8.15675.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length284
Homology
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Match: A0A6H5KHX0_9PHAE (FAPb protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX0_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 3.750e-94
Identity = 181/347 (52.16%), Postives = 212/347 (61.10%), Query Frame = 0
Query:    1 MPSRNLGNLALAAAIALVAALVLFARDGTGVWRIPFLS-PESAATP------------VHVAGA--DGGSEXXXXXXXXXXSKPTK--------------------QAAAGVT-----------------------------AKAPLSKEVKDPATGLVLPRTKRFPPSKADLTCLGVGVRAKSIAVAKVNVYTVGLYVNPKGARGALKKYAGSDPISLSKDKSLFKVLGQVGGFSKYLHLVFARNVGAQKVVDALTSVKGVGKGVLDRFSTLMLDAVGASIGKGESVTLGWEGKDKMVILVRDKSAGTIVDAALPKAVFDLYLGSSPVSPAAKAAFAEGVLAFLAS 283
            MPSR +GNLA+AAA AL +A + FARD  G WR  FL+ P   +T             VH+AG   DG S+        XX                         +A A                                AK PLS +V+DPATGLVLPRTK+F  SK  L CLGVGVR KS+A   VNVYTVGLYV PKGAR ALK YAG DP  LSKDKS+++VLG  G FSKYLHLVFAR+VGAQKVVDA T+VKGV + VLD+FS+L ++ VG SI + ESVTLGWEGKD++V+LVRDK  G+I+D ALP +VF L+LGS PVSP AK AFAEGV  FLAS
Sbjct:    1 MPSREVGNLAVAAAFALFSAFLFFARDEAGAWRENFLNLPIGGSTAPIASNSDPYVPAVHLAGVTGDGNSKGPPVASESXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSIIDEALPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS 347          
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Match: D7G2G9_ECTSI (Similar to Chalcone Isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G9_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 2.040e-93
Identity = 147/214 (68.69%), Postives = 172/214 (80.37%), Query Frame = 0
Query:   70 TKQAAAGVTAKAPLSKEVKDPATGLVLPRTKRFPPSKADLTCLGVGVRAKSIAVAKVNVYTVGLYVNPKGARGALKKYAGSDPISLSKDKSLFKVLGQVGGFSKYLHLVFARNVGAQKVVDALTSVKGVGKGVLDRFSTLMLDAVGASIGKGESVTLGWEGKDKMVILVRDKSAGTIVDAALPKAVFDLYLGSSPVSPAAKAAFAEGVLAFLAS 283
            T  A A   AK PLS +V+DPATGLVLPRTK+F  SK  L CLGVGVR KS+A   VNVYTVGLYV PKGAR ALK YAG DP  LSKDKS+++VLG  G FSKYLHLVFAR+VGAQKVVDA T+VKGV + VLD+FS+L ++ VG SI + ESVTLGWEGKD++V+LVRDK  G+++D +LP +VF+L+LGS PVSP AK AFAEGV AFLAS
Sbjct:   16 TSYAKAAGLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVNVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSINREESVTLGWEGKDRLVVLVRDKEIGSVIDESLPASVFNLFLGSDPVSPVAKTAFAEGVPAFLAS 229          
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Match: A0A0G4GUV1_VITBC (Chalcone_isomerase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GUV1_VITBC)

HSP 1 Score: 150 bits (378), Expect = 4.950e-41
Identity = 89/197 (45.18%), Postives = 121/197 (61.42%), Query Frame = 0
Query:   82 PLSKEVKDPATGLVLPRTKRFPPSKADLTCLGVGVRAKSIAVAKVNVYTVGLYVNPKGARGALKKYAGSDPISLSKDKSLFK-VLGQVGGFSKYLHLVFARNVGAQKVVDALTSVKGVGKGVLDRFSTLMLDAVGASIGKGESVTLGWEGKDKMVILVRDKSAGTIVDAALPKAVFDLYLGSSPVSPAAKAAFAEGV 277
            P++  +KD  TG+  P    FP     +T LG G R K++ +AKVNVY+VGLYV PK A  AL  + G    SL  D   +  +LG+     K + L FAR VGA KV DAL++VKGV   V+  F +L+   +GASI K E++ +GW    ++ +L+R + AGT+VDA LPKA F+LYLG +PVS  AK AF + V
Sbjct:    4 PVAAVLKDKVTGIEFPCEATFP-GTPKMTLLGAGPRRKNLGIAKVNVYSVGLYVEPKEAAKALSSFKGESEESLMNDDRFYDTLLGKE--VPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRV 197          
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Match: A0A0G4GWT2_9ALVE (Chalcone_isomerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWT2_9ALVE)

HSP 1 Score: 148 bits (374), Expect = 3.560e-40
Identity = 92/197 (46.70%), Postives = 123/197 (62.44%), Query Frame = 0
Query:   82 PLSKEVKDPATGLVLPRTKRFPPSKADLTCLGVGVRAKSI-AVAKVNVYTVGLYVNPKGARGALKKYAGSDPISLSKDKSLFKVLGQVGGFSKYLHLVFARNVGAQKVVDALTSVKGVGKGVLDRFSTLMLDAVGASIGKGESVTLGWEGKDKMVILVRDKSAGTIVDAALPKAVFDLYLGSSPVSPAAKAAFAEGV 277
            PL+  + D ATGL       FP S   +T LG GVRAK++     VNVY+VGLYV P  AR  L  +   +   L+K +  +K L +     K +HL FAR+VGA K+V+ALTS+ GV +  L +FS L+LD++G+SIG  E+VTL     D + ++VR K AG++ D+ LPKA FDLYLG +PVS  AK AFA  V
Sbjct:   31 PLAAILTDAATGLDFETDVSFP-SSPKMTLLGAGVRAKALLGPIAVNVYSVGLYVEPSKARQTLSGFKTIEEAELAKKEDFYKALMKED-LPKAMHLKFARSVGASKIVEALTSLNGVPEESLSKFSKLLLDSIGSSIGYKETVTLSSSKPDTLDVIVRGKHAGSVRDSKLPKAFFDLYLGKNPVSSEAKKAFASRV 225          
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Match: A0A835ZC45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC45_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.270e-39
Identity = 92/206 (44.66%), Postives = 121/206 (58.74%), Query Frame = 0
Query:   89 DPATGLVLPRTKRFPPSKADLTCLGVGVRAKSIAVAKVNVYTVGLYVNPKGARGALKKYAGSDPISLSKDKSLFKVLGQVGGFSKYLHLVFARNVGAQKVVDALTS-VKGVGKGVLDRFSTLMLDAVGASIGKGESVTLGWEGKDKMVILVRDKSAGTIVDAALPKAVFD--------------LYLGSSPVSPAAKAAFAEGVLA 279
            +P TG+ L  T  F  S A L C+G G R KS+A+A V VY + LYV P GA  AL +Y G  P   ++D   ++ L +   F  YL + FARNVG  KVV+ALTS V+GV   VL  F+ ++  A+G S+ KG+ V +GWEG+ ++ ++VR    G + DA LP A+F               LYLGS PVSP AKAAFA GV A
Sbjct:  325 EPVTGIALAATASFGGS-AQLRCVGAGARVKSVALASVKVYALALYVEPGGAARALARYEGVAPAERARDVGFYEELMKPAAFPSYLVMSFARNVGTPKVVEALTSAVQGVAPDVLKNFAGMLGAAMGPSMRKGDVVAMGWEGEGRLAVVVRGVRVGEVADAVLPGAIFKVNFDTSTVHFLAVRLYLGSDPVSPPAKAAFASGVSA 529          
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Match: A0A6S9GES1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GES1_HETAK)

HSP 1 Score: 146 bits (369), Expect = 4.210e-38
Identity = 90/197 (45.69%), Postives = 118/197 (59.90%), Query Frame = 0
Query:   81 APLSKEVKDPATGLVLPRTKRFPPSKADLTCLGVGVRAKSIAVAKVNVYTVGLYVNPKGARGALKKYAGSDPISLSKDKSLFKVLGQVGGFSKYLHLVFARNVGAQKVVDALTSVKGVGKGVLDRFSTLMLDAVGASIGKGESVTLGWEGKDKMVILVRDKSAGTIVDAALPKAVFDLYLGSSPVSPAAKAAFAEGV 277
            AP +  + D ATG+     K F    A L  +G GVRAK++ VA VNVY+V LYV+   A  AL  Y G+          +F VL     F+K ++L FAR VG+QK++DALT+V+GV    LD FS L+L A+G  IG  E++ LG++    M + VR+  AGT+ DA L  AVF LYLG+SPVS  AK AF  GV
Sbjct:  159 APGATSLTDDATGIAFDGVKAF--GGAKLAAVGAGVRAKNLGVAMVNVYSVCLYVDKPKAAKALATYKGNP------GPGVFDVL-MAKNFNKVMYLKFARGVGSQKIIDALTAVEGVPAATLDEFSALLLGAMGGQIGASETIALGFDASGSMSVYVREALAGTVADATLAPAVFKLYLGASPVSQPAKDAFGAGV 346          
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Match: A0A7S2UYK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYK7_9STRA)

HSP 1 Score: 139 bits (349), Expect = 9.370e-37
Identity = 82/187 (43.85%), Postives = 113/187 (60.43%), Query Frame = 0
Query:   74 AAGVTAKAPLSKEVKDPATGLVLPRTKRFPPSKAD--LTCLGVGVRAKS-IAVAKVNVYTVGLYVNPKGARGALKKYAGSDPISLSKDKSLFKVLGQVGGFSKYLHLVFARNVGAQKVVDALTSVKGVGKGVLDRFSTLMLDAVGASIGKGESVTLGWEGKDKMVILVRDKSAGTIVDAALPKAVFD 257
            A G  + +  + +V +P TG+  P TK F  +     LT  GVGVR K+ +   KVNVY +GLYV+P  A  A  KY G D   ++KD   FK+L   G F+K +++ +AR VG  KVVDAL  V       LD F  L++   G++IG  E++TLGWEGKDK+V+ VRDK+ GT+  A L +AVF+
Sbjct:   18 ATGEESSSSAADKVTEPVTGIDFPVTKSFSLNSTSPTLTLTGVGVRVKALVGPLKVNVYGMGLYVDPSRAARAFSKYKGKDAKEVAKDDDFFKILHSPG-FAKAIYIDYARAVGVDKVVDALRLVPTEDTAALDYFCDLLVIGTGSTIGNRETMTLGWEGKDKLVVQVRDKTVGTVTSAKLVEAVFE 203          
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Match: A0A835Z7E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E7_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.390e-33
Identity = 93/263 (35.36%), Postives = 138/263 (52.47%), Query Frame = 0
Query:   21 LVLFARDGTGVWRIPFLSPESAATPVHVAGADGGSEXXXXXXXXXXSKPTKQAAAGVTAKA----PLSKEVKDPATGLVLPRTKRFPPSKADLTCLGVGVRAKSIAV-AKVNVYTVGLYVNPKGARGALKKYAGSDPISLSKDKSLFKVLGQVGGFSKYLHLVFARNVGAQKVVDALTSVKGVGKGVLDRFSTLMLDAVGASIGK-GESVTLGWEGKDKMVILVRDKSAGTIVDAALPKAVFDLYLGSSPVSPAAKAAFAEGV 277
            L +F  D  G   +P      A       GAD  S           S   + AA   T++     P   ++ +PATG+VL  T  F  S   LTC+G+GVR   +   + V+VY +GLY++  GAR ALK +       L++    +  L + G F++Y+ L F R V   KV DALT+V+GV   ++D +  L+  A+G    + G+++ LG+EGKD++V++   K+ G +    LP AVF LYLG  P+ PAAK A A+GV
Sbjct:   90 LAIFRLDKKGYLEVP------AVWDAGAVGADYASLSEQGVLTLYQSGYVRDAAVWSTSREVATPPRKTDLVEPATGIVLWPTDSFNGSPP-LTCVGLGVRTVPVLYFSSVHVYVMGLYIDAVGARKALKAFLPLPAEDLAQKPEFYSALLKPGVFTRYIVLAFNRKVSTLKVADALTAVEGVPPPIVDAYRRLLEGALGEKGARPGDTLALGFEGKDRLVVVANGKTHGAVRSTVLPAAVFKLYLGDDPIIPAAKRAVADGV 345          
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Match: A0A7S1JL13_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JL13_9ALVE)

HSP 1 Score: 109 bits (272), Expect = 5.890e-26
Identity = 65/144 (45.14%), Postives = 88/144 (61.11%), Query Frame = 0
Query:  135 VNPKGARGALKKYAGSDPISLSKDKSLFK-VLGQVGGFSKYLHLVFARNVGAQKVVDALTSVKGVGKGVLDRFSTLMLDAVGASIGKGESVTLGWEGKDKMVILVRDKSAGTIVDAALPKAVFDLYLGSSPVSPAAKAAFAEGV 277
            V PK A  AL  + G    SL  D   +  +LG+     K + L FAR VGA KV DAL++VKGV   V+  F +L+   +GASI K E++ +GW    ++ +L+R + AGT+VDA LPKA F+LYLG +PVS  AK AF + V
Sbjct:    1 VEPKEASKALSSFKGESEESLMNDDRFYDTLLGKE--VPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRV 142          
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Match: A0A835ZLC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLC9_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.680e-23
Identity = 62/133 (46.62%), Postives = 81/133 (60.90%), Query Frame = 0
Query:  171 FSKYLHLVFARNVGAQKVVDALTSVKGVGKGVLDRFSTLMLDAVGASIGKGESVTLGWEGKDKMVILVRDKSAGTIVDAALPKAVF------------------------DLYLGSSPVSPAAKAAFAEGVLA 279
            + +YL L FAR+V A KV DALT+V+GV   VL  F+ L+  A+G ++  G+++ LGWEGKD++V++VR K AG + DAALP A+F                         LYLGS PVSP AKAAFA GV A
Sbjct:  296 YPRYLLLSFARDVSAAKVTDALTAVQGVAPDVLKAFAHLLGSAIGGAVHAGDTIALGWEGKDRLVVVVRGKKAGEVKDAALPGAIFKRSVMPISDARPFCRCALLPPLRAQLYLGSDPVSPPAKAAFASGVSA 428          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHX0_9PHAE3.750e-9452.16FAPb protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G2G9_ECTSI2.040e-9368.69Similar to Chalcone Isomerase n=1 Tax=Ectocarpus s... [more]
A0A0G4GUV1_VITBC4.950e-4145.18Chalcone_isomerase domain-containing protein n=2 T... [more]
A0A0G4GWT2_9ALVE3.560e-4046.70Chalcone_isomerase domain-containing protein n=1 T... [more]
A0A835ZC45_9STRA1.270e-3944.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9GES1_HETAK4.210e-3845.69Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UYK7_9STRA9.370e-3743.85Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835Z7E7_9STRA2.390e-3335.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1JL13_9ALVE5.890e-2645.14Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A835ZLC9_9STRA1.680e-2346.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016087Chalcone isomerasePFAMPF16036Chalcone_3coord: 105..271
e-value: 2.7E-8
score: 34.1
IPR016088Chalcone isomerase, 3-layer sandwichGENE3D3.50.70.10coord: 98..259
e-value: 1.3E-33
score: 118.4
IPR016089Chalcone isomerase, orthogonal bundle domain superfamilyGENE3D1.10.890.20coord: 140..276
e-value: 1.3E-33
score: 118.4
NoneNo IPR availablePANTHERPTHR47698FAMILY NOT NAMEDcoord: 60..280
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..283
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.537
NoneNo IPR availableTMHMMTMhelixcoord: 7..25
IPR036298Chalcone isomerase superfamilySUPERFAMILY54626Chalcone isomerasecoord: 90..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2497869..2499831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15675.1mRNA_C-linearis_contig8.15675.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2496795..2500794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15675.1 ID=prot_C-linearis_contig8.15675.1|Name=mRNA_C-linearis_contig8.15675.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=284bp
MPSRNLGNLALAAAIALVAALVLFARDGTGVWRIPFLSPESAATPVHVAG
ADGGSEKKKKKPRAAASKPTKQAAAGVTAKAPLSKEVKDPATGLVLPRTK
RFPPSKADLTCLGVGVRAKSIAVAKVNVYTVGLYVNPKGARGALKKYAGS
DPISLSKDKSLFKVLGQVGGFSKYLHLVFARNVGAQKVVDALTSVKGVGK
GVLDRFSTLMLDAVGASIGKGESVTLGWEGKDKMVILVRDKSAGTIVDAA
LPKAVFDLYLGSSPVSPAAKAAFAEGVLAFLAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016087Chalcone_isomerase
IPR016088Chalcone_isomerase_3-sand
IPR016089Chalcone_isomerase_bundle_sf
IPR036298Chalcone_isomerase_sf