mRNA_C-linearis_contig8.15591.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Match: D7G097_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G097_ECTSI) HSP 1 Score: 615 bits (1585), Expect = 6.170e-210 Identity = 314/350 (89.71%), Postives = 328/350 (93.71%), Query Frame = 1
Query: 676 AGEIATPRRAPVRTGHWKLGHEIGKGSFGAVHIGLNEDTGDLIAVKQLSLRNADQAEELYTEIELMRQLTHPNIVCYLGAEVNDNEKTISIFQEWVPGSVTTLLVNFGPFSDRRIAGYTKQILHGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDAESFTGMGDHTRVGSPLFMAPEILLREDYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLPKGLSQPLTKFLLRCFERDPSKRASAKELLSDPFVAKRRGEKTLLSKSSAPASDADSVVSDIDNLSRTAAIARIRRASVSDYSRPNSDQSAQSASSPRGSDFAMGISDEG 1725
AGE ATPRRAPVRTGHWKLGHEIGKGSFG+VHIGLNED+GDLIAVK LSL+NADQAEELYTEIELMRQLTHPNIVCYLGAEVND EKTISIFQEWVPGSVTTLLVNFGPFSDRRIA YTKQIL GLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDA+SFTG+G+HTRVGSPLFMAPEILLRE+YGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLP LSQPLTKFLLRCFER+PSKRA+AKELLSDPFVA+RRGE+ L + SA ASDADSVVSDIDNLSRTAAIARIRRAS+SDYSRPNSDQS +SA S R FAMG G
Sbjct: 43 AGERATPRRAPVRTGHWKLGHEIGKGSFGSVHIGLNEDSGDLIAVKLLSLKNADQAEELYTEIELMRQLTHPNIVCYLGAEVNDKEKTISIFQEWVPGSVTTLLVNFGPFSDRRIADYTKQILQGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDADSFTGLGEHTRVGSPLFMAPEILLREEYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLPDSLSQPLTKFLLRCFERNPSKRATAKELLSDPFVARRRGERVLAPRGSA-ASDADSVVSDIDNLSRTAAIARIRRASISDYSRPNSDQSTRSAPSLRTPGFAMGTQPAG 391
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Match: A0A6H5L4B1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4B1_9PHAE) HSP 1 Score: 350 bits (897), Expect = 9.710e-108 Identity = 241/362 (66.57%), Postives = 253/362 (69.89%), Query Frame = 1
Query: 1222 MAPEILLREDYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLPKGLSQPLTKFLLRCFERDPSKRASAKELLSDPFVAKRRGEKTLLSKSSAPASDADSVVSDIDNLSRTAAIARIRRASVSDYSRPNSDQSAQSASSPRGSDFAMGISDEGARAAXXXXXXXXXXXXXXXXXXXXXXXXXXERYQLXXXXXXXXXXXXXXXXXXXXXXXLAQQVVAKLEDD--VRDGGTPPRRPVSLHSALAPPLRVVTAGLEPXXXXXXXXXXXXXXXXXXXPARRVSVGRNSPGTPNPFGGRRRSLDTSPDGARSSVSPRASRASPRAGGA---PSPGEMFNGDG--ERLVAA 2286
MAPEILLRE+YGPQVD+WSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLP LSQPLTKFLLRCFERDPSKRA+AKELLSDPFVAKRRGE+ L + S SDADSVVSDID LSRTAAIARIRRAS+SDYSRPNSDQS +SA S R AMG G XXXXXXXXXXXXXXX LA+QV AKLED V DGGTPPRRPVSLHS L+P LRV TAGLEP XXXX RR+S GRNSPGTPNPFGGRRRSLDTSPDGARSS PRAS SP A G+ P G+ G G ER AA
Sbjct: 1 MAPEILLREEYGPQVDVWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLPDSLSQPLTKFLLRCFERDPSKRATAKELLSDPFVAKRRGERVLAPRGST-VSDADSVVSDIDTLSRTAAIARIRRASISDYSRPNSDQSTRSAPSLRTPGLAMGPQPAGGAXXXXXXXXXXXXXXXXXDILPD----------------------------------LAKQVAAKLEDGSAVGDGGTPPRRPVSLHSGLSPKLRVETAGLEPPASSSAAPRITXXXX-----TRRLSSGRNSPGTPNPFGGRRRSLDTSPDGARSS--PRASGVSPAALGSSVVPQDGDQNGGRGRSERAPAA 320
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA) HSP 1 Score: 289 bits (740), Expect = 1.970e-86 Identity = 150/281 (53.38%), Postives = 192/281 (68.33%), Query Frame = 1
Query: 667 GRAAGEIATPRRAPVRTGHWKLGHEIGKGSFGAVHIGLNEDTGDLIAVKQLSLRNADQ-AEELYTEIELMRQLTHPNIVCYLGAEVNDNEKTISIFQEWVPG-SVTTLLVNFGPFSDRRIAGYTKQILHGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDAESFTGMGDHTRVGSPLFMAPEILLREDYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEG-PPPLPKGLSQPLTKFLLRCFERDPSKRASAKELLSDPFV 1500
GR G +T RR VR G WKLG+ I +GSFG V++GLNE TG+L+AVK LSL +++ EL+ E+ LMRQ +HPNIV YLGAE+ + + + IFQEWVPG SV++LL FGPFS+ YT+Q L GL YLH +V+HRDIKG NIL+DDRG VKL DFGAS + + G G G+P FMAPE+L R+ +GP VDIWS GGA+L+M TG+PPW++ + TP AL+ + +G PPPLP LS L L RCF DP+ R SA +L D F+
Sbjct: 72 GRGGGWASTVRRGRVRPGKWKLGNRIARGSFGVVYMGLNEVTGELMAVKVLSLHGSERDMRELHREMALMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGSNILVDDRGTVKLADFGASICVSDPADAGGG--ALKGTPYFMAPEVLQRKPHGPLVDIWSFGGAILQMVTGEPPWYSAGVSTPYALLQTMLERKGQPPPLPANLSPSLAAMLRRCFSWDPALRPSAAQLELDAFL 350
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Match: A0A835YZY1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY1_9STRA) HSP 1 Score: 275 bits (703), Expect = 1.080e-83 Identity = 131/171 (76.61%), Postives = 149/171 (87.13%), Query Frame = 1
Query: 862 IELMRQLTHPNIVCYLGAEVNDNEKTISIFQEWVPGSVTTLLVNFGPFSDRRIAGYTKQILHGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDAESFTGMGDHTRVGSPLFMAPEILLREDYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKR 1374
+ELMRQL HPNIVCYLGAE++ E+TISIFQEWVP SVT+LLVNFGPF +RR+ T+QIL GLVYLH++RV+HRDIKG NILIDDRGVVKLCDFGASK+LD G+GDHTRVGSP FMAPE+LLR++YG QVDIWSL GA+LEMATG PPW TLNLRTPVAL W+KR
Sbjct: 1 MELMRQLKHPNIVCYLGAELHAAERTISIFQEWVPMSVTSLLVNFGPFKERRVVQVTRQILEGLVYLHAKRVVHRDIKGSNILIDDRGVVKLCDFGASKMLDLNQL-GLGDHTRVGSPYFMAPEVLLRQEYGAQVDIWSLAGAMLEMATGNPPWATLNLRTPVALKEWIKR 170
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA) HSP 1 Score: 278 bits (710), Expect = 3.070e-83 Identity = 144/268 (53.73%), Postives = 183/268 (68.28%), Query Frame = 1
Query: 709 VRTGHWKLGHEIGKGSFGAVHIGLNEDTGDLIAVKQLSLRNADQ-AEELYTEIELMRQLTHPNIVCYLGAEVNDNEKTISIFQEWVPG-SVTTLLVNFGPFSDRRIAGYTKQILHGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDAESFTGMGDHTRVGSPLFMAPEILLREDYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGP-PPLPKGLSQPLTKFLLRCFERDPSKRASAKELLSDPFVA 1503
V+ G WKLG+ I +GSFG V++GLNE TG L+AVK LSLR +D+ EL+ E+ LMR +HPNIV YLGAE+ + + IFQEWVPG SV++LL FGPFS+ GYT+Q L GL YLHS V+HRDI G NIL+DD GVVKL DFGAS L +++ D G+P FMAPE+L R +G VD+WS GGAVL+M +G+PPW + + TP AL+ + G PPLP LS L FL RCF DP++R +A EL DPF++
Sbjct: 2 VQPGKWKLGNRIARGSFGVVYMGLNEATGALMAVKVLSLRGSDRDLHELHREMALMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGSNILVDDHGVVKLADFGASLQL-SDAAGSRADGALKGTPYFMAPEVLQRSAHGMPVDVWSFGGAVLQMVSGEPPWFSYGVSTPYALLQALLERRGQTPPLPADLSAGLRAFLERCFRWDPAERPTAAELALDPFLS 268
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Match: A0A7S3UV54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV54_HETAK) HSP 1 Score: 281 bits (720), Expect = 1.150e-81 Identity = 143/270 (52.96%), Postives = 183/270 (67.78%), Query Frame = 1
Query: 709 VRTGHWKLGHEIGKGSFGAVHIGLNEDTGDLIAVKQLSLRN-ADQAEELYTEIELMRQLTHPNIVCYLGAEVNDNEKTISIFQEWVPG-SVTTLLVNFGPFSDRRIAGYTKQILHGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDAESFT---GMGDHTRVGSPLFMAPEILLREDYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLPKGLSQPLTKFLLRCFERDPSKRASAKELLSDPFVA 1503
V+ G WK+G IG+G FG V++GL EDTG LIA+K +SL + LY E++LMR L HPNIV Y GAEV++ E ++ IFQ+WVPG SV +LL FGPF + + YTKQ+L GL YLH+ ++IHRDIKG NIL+D GVVKL DFG SK L+ M T G+P FMAPE+++R+ YG + DIWSLGGAV+EMATG PPW +L +R P+ L ++ PP + LS PL FL RCF R+P +R SAK LL D FV+
Sbjct: 87 VQPGQWKIGQRIGQGKFGEVYVGLCEDTGQLIAIKIISLPGQTSELATLYREVDLMRSLRHPNIVSYFGAEVSEEECSLCIFQQWVPGGSVASLLKKFGPFREHVVRKYTKQLLKGLRYLHNNKIIHRDIKGANILVDVTGVVKLADFGTSKRLEISDELMQETMAHGTMKGTPYFMAPEVIMRQKYGRKADIWSLGGAVMEMATGDPPWKSLQMRNPIELFRFIHTHTHPPNIDFSLSLPLRLFLERCFIRNPKERPSAKALLKDRFVS 356
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Match: F0YL51_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL51_AURAN) HSP 1 Score: 256 bits (654), Expect = 1.680e-73 Identity = 129/264 (48.86%), Postives = 175/264 (66.29%), Query Frame = 1
Query: 724 WKLGHEIGKGSFGAVHIGLNEDTGDLIAVKQLSLRNADQ-AEEL---YTEIELMRQLTHPNIVCYLGAEVNDNEKTISIFQEWVPG-SVTTLLVNFGPFSDRRIAGYTKQILHGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDAESFTGMGDHTRVGSPLFMAPEILLREDYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLPKGLSQPLTKFLLRCFERDPSKRASAKELLSDPFV 1500
W+ G IG G+ G V++GL EDTG +IAVK++ N Q EEL EIEL+R L HPNIV YLG +V+D+++T+ IF EWVPG S+ L+ FG S+ + Y Q+L GL YLH ++VIHRDIK NIL+DDRG +KL DFG+SK +D+ G +H+ G+P FMAPE++++ +G + DIWS+G +L+M TGQPPW +L L TP AL+ + + PPP+P LS L LL F RD + R +A +LL PFV
Sbjct: 59 WRKGDLIGTGANGRVYLGLEEDTGAIIAVKEILFTNNQQDLEELAQMQEEIELLRSLHHPNIVTYLGTDVSDDDQTLYIFTEWVPGGSIQALVTKFGKLSEAIVRKYVAQLLVGLDYLHEQQVIHRDIKAANILVDDRGTIKLADFGSSKRMDSMGTMGNENHSLRGTPYFMAPEVIMQTGHGRKADIWSVGCTILQMVTGQPPWKSLQLGTPAALMFHIANAQAPPPMPSALSDHLRNLLLATFSRDMNNRPTANQLLEYPFV 322
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Match: A0A7S1FWX6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWX6_9STRA) HSP 1 Score: 258 bits (659), Expect = 7.950e-71 Identity = 140/272 (51.47%), Postives = 175/272 (64.34%), Query Frame = 1
Query: 709 VRTGHWKLGHEIGKGSFGAVHIGLNEDTGDLIAVKQLSLRNADQAE---ELYTEIELMRQLTHPNIVCYLGAEVNDNEKTISIFQEWVPG-SVTTLLVNFGPFSDRRIAGYTKQILHGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLL--DAESFTGMGDHTRVGSPLFMAPEILLREDYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLPKG---LSQPLTKFLLRCFERDPSKRASAKELLSDPF 1497
VR WKLG IG GSFG VH+G+++ TG LIAVK L + + EL E++LMR+ HPNIV YLGAEV+D E T+ IFQEWVPG SV LL FG F + Y +Q+L GL YLH+ +IHRDIKGGNIL+DDRG VKL DFGASK L D G+ R G+P FMAPE+L +E YG + DIWS+G +++M TG+PPW L RTPV+L+ + + PPL +S L K L CF+RD S R SA ++L D F
Sbjct: 137 VRPNQWKLGERIGSGSFGTVHVGMDDRTGTLIAVKLLHILHESLPSDIVELQREVDLMREFDHPNIVRYLGAEVDDEEGTLYIFQEWVPGGSVADLLKKFGGFGYGVVRNYLEQVLKGLAYLHANNIIHRDIKGGNILVDDRGNVKLADFGASKQLGEDGSLNGGLAASLR-GTPYFMAPEVLSQEKYGRKADIWSVGCVIVQMITGEPPWKRLGFRTPVSLLFHIHSSADLPPLSNHSCTISPALQKILNMCFQRDSSLRPSASQILEDDF 407
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Match: A0A8J2WWQ2_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWQ2_9STRA) HSP 1 Score: 253 bits (645), Expect = 8.820e-71 Identity = 126/263 (47.91%), Postives = 171/263 (65.02%), Query Frame = 1
Query: 724 WKLGHEIGKGSFGAVHIGLNEDTGDLIAVKQLSLRNADQAEEL---YTEIELMRQLTHPNIVCYLGAEVNDNEKTISIFQEWVPG-SVTTLLVNFGPFSDRRIAGYTKQILHGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDAESFTGMGDHTRVGSPLFMAPEILLREDYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLPKGLSQPLTKFLLRCFERDPSKRASAKELLSDPFV 1500
W+ G IG G+ G V++GL ED+G +IAVK+++ N + EEL EIEL+R L HPNIV YLG ++ D K + IF EWVPG S+ L+ FG S+ + Y Q+L GL YLH ++VIHRDIK NIL+DDRG +KL DFG+SK LD+ G+ + G+P FMAPE++++ +G + DIWS+G +L+M TGQPPW L L TP AL+ + + PPP+P LS L LL F RD ++R +A +LL PFV
Sbjct: 54 WRRGDLIGTGANGRVYLGLEEDSGAIIAVKEMAFSNEQELEELAQMQEEIELLRSLQHPNIVTYLGTDICDENKLLYIFTEWVPGGSIQALITKFGRLSEAIVRKYVAQLLVGLKYLHEQQVIHRDIKAANILVDDRGTIKLADFGSSKRLDSMGMINNGNLSLRGTPYFMAPEVIMQIGHGRKADIWSVGCTILQMVTGQPPWKNLRLGTPAALMFHIANAQSPPPMPSMLSIELNNLLLATFSRDTNRRPAANDLLRYPFV 316
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Match: D8LMN1_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMN1_ECTSI) HSP 1 Score: 262 bits (669), Expect = 2.090e-70 Identity = 133/271 (49.08%), Postives = 187/271 (69.00%), Query Frame = 1
Query: 694 PRRAPVRTGHWKLGHEIGKGSFGAVHIGLNEDTGDLIAVKQLSLRNADQA-EELYTEIELMRQLTHPNIVCYLGAEVNDNEKTISIFQEWVP-GSVTTLLVNFGPFSDRRIAGYTKQILHGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDAESFTGMGDHTRVGSPLFMAPEILLREDYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLPKGLSQPLTKFLLRCFERDPSKRASAKELLSDPFV 1500
P++ V+ GHWK G IG GS G V++G+NEDTG+L+AVK+++L D+ LY EI++M +L HP+IV YLGAE+ D+++ + IFQEWVP GS+ +LL FG SD YT+Q+L GLVYLH+ RVIHRD+K NIL+DDRG VKL DFG + +L ++ G+ + + G+PLFMAPE+LL+ G +VD+WSLG AVLEM T +PPW + PV +I GPPPLP+ LS L +FLL CF + +R ++ +L++ ++
Sbjct: 294 PQQGRVKKGHWKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRKLCIFQEWVPAGSLHSLLGQFGALSDAMTRKYTRQVLEGLVYLHANRVIHRDVKSKNILVDDRGNVKLADFGCALVLKDDNGDGV-EMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWAD-TFKHPVEIIEHFSENPGPPPLPEDLSPALREFLLSCFTWEAGRRPTSHQLVAHEYL 562 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15591.1 >prot_C-linearis_contig8.15591.1 ID=prot_C-linearis_contig8.15591.1|Name=mRNA_C-linearis_contig8.15591.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=898bp MLPANSDQALRAALRNLQLSPDMIDTSAAAIYEHVRDPVEHPVDKELARLback to top mRNA from alignment at C-linearis_contig8:1627778..1632508- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15591.1 ID=mRNA_C-linearis_contig8.15591.1|Name=mRNA_C-linearis_contig8.15591.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4731bp|location=Sequence derived from alignment at C-linearis_contig8:1627778..1632508- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:1627778..1632508- >mRNA_C-linearis_contig8.15591.1 ID=mRNA_C-linearis_contig8.15591.1|Name=mRNA_C-linearis_contig8.15591.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5388bp|location=Sequence derived from alignment at C-linearis_contig8:1627778..1632508- (Chordaria linearis ClinC8C monoicous)back to top |